Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0142671 Lupinus albus HOM05D001000 ORTHO05D002976 9.0e-23 109.4 55 100.0
Lalb_Chr06g0162911 Lupinus albus HOM05D001000 ORTHO05D002976 3.5e-19 97.4 54 88.9
Glyma.02G146400 Glycine max HOM05D001000 ORTHO05D002976 8.2e-16 86.3 49 83.7
Glyma.10G027500 Glycine max HOM05D001000 ORTHO05D002976 8.2e-16 86.3 49 83.7
Phvul.007G173000 Phaseolus vulgaris HOM05D001000 ORTHO05D002976 1.1e-15 85.9 49 83.7
VMungo0720G2136 Vigna mungo HOM05D001000 ORTHO05D002976 1.1e-15 85.9 49 83.7
arahy.Tifrunner.gnm1.ann1.HFU6F2 Arachis hypogaea HOM05D001000 ORTHO05D002976 1.4e-15 85.5 49 81.6
Medtr1g072110 Medicago truncatula HOM05D001000 ORTHO05D002976 3.1e-15 84.3 49 79.6
Psat0s586g0080 Pisum sativum HOM05D001000 ORTHO05D002976 5.3e-15 83.6 51 74.5
arahy.Tifrunner.gnm1.ann1.N32B4U Arachis hypogaea HOM05D001000 ORTHO05D002976 4.5e-14 80.5 46 80.4
Ca_08612_v3 Cicer arietinum L. HOM05D001000 ORTHO05D002976 4.5e-14 80.5 55 72.7
TPR.G35677 Trifolium pratense HOM05D001000 ORTHO05D002976 5.8e-14 80.1 55 70.9
Lj5g0016912 Lotus japonicus HOM05D001000 ORTHO05D002976 1.3e-13 79.0 50 78.0
Medtr7g095150 Medicago truncatula HOM05D001000 ORTHO05D002976 1.4e-12 75.5 55 67.3
Phvul.001G153000 Phaseolus vulgaris HOM05D001000 ORTHO05D002976 1.4e-12 75.5 52 67.3
Cfa006161 Carpinus fangiana HOM05D001000 ORTHO05D002976 5.5e-12 73.6 49 73.5
Glyma.03G155600 Glycine max HOM05D001000 ORTHO05D002976 5.5e-12 73.6 49 73.5
CiPaw.08G107000 Carya illinoinensis HOM05D001000 ORTHO05D002976 7.1e-12 73.2 49 75.5
arahy.Tifrunner.gnm1.ann1.1M8NR5 Arachis hypogaea HOM05D001000 ORTHO05D002976 1.2e-11 72.4 50 72.0
Glyma.19G157700 Glycine max HOM05D001000 ORTHO05D002976 1.2e-11 72.4 49 71.4
CiPaw.07G090000 Carya illinoinensis HOM05D001000 ORTHO05D002976 2.1e-11 71.6 49 73.5
Ciclev10024021m.g Citrus clementina HOM05D001000 ORTHO05D002976 2.1e-11 71.6 49 71.4
Haze_04688 Corylus avellana HOM05D001000 ORTHO05D002976 3.5e-11 70.9 49 71.4
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 3.5e-11 70.9 54 64.8
Duzib138G0331 Durio zibethinus HOM05D001000 ORTHO05D002976 4.6e-11 70.5 49 69.4
Thecc.01G276400 Theobroma cacao HOM05D001000 ORTHO05D002976 4.6e-11 70.5 49 69.4
Dinv44538 Davidia involucrata HOM05D001000 ORTHO05D002976 6.1e-11 70.1 54 66.7
Nn1g02331 Nelumbo nucifera HOM05D001000 ORTHO05D002976 6.1e-11 70.1 49 69.4
CSS0047001 Camellia sinensis var. sinensis HOM05D001000 ORTHO05D002976 7.9e-11 69.7 54 63.0
CSS0003463 Camellia sinensis var. sinensis HOM05D001000 ORTHO05D002976 1.0e-10 69.3 49 67.3
Gohir.D11G128900 Gossypium hirsutum HOM05D001000 ORTHO05D002976 1.0e-10 69.3 49 69.4
PGR044G1478 Punica granatum HOM05D001000 ORTHO05D002976 1.0e-10 69.3 49 69.4
Manes.05G078000 Manihot esculenta HOM05D001000 ORTHO05D002976 1.3e-10 68.9 49 67.3
CSS0013646 Camellia sinensis var. sinensis HOM05D001000 ORTHO05D002976 1.8e-10 68.6 52 63.5
Atru.chr5.1466 Acer truncatum HOM05D001000 ORTHO05D002976 2.3e-10 68.2 49 67.3
Gohir.A08G065600 Gossypium hirsutum HOM05D001000 ORTHO05D002976 2.3e-10 68.2 49 67.3
Gorai.007G137900 Gossypium raimondii HOM05D001000 ORTHO05D002976 2.3e-10 68.2 49 67.3
Nn4g26331 Nelumbo nucifera HOM05D001000 ORTHO05D002976 2.3e-10 68.2 49 67.3
Actinidia00775 Actinidia chinensis HOM05D001000 ORTHO05D002976 3.0e-10 67.8 52 67.3
Gohir.A11G123700 Gossypium hirsutum HOM05D001000 ORTHO05D002976 3.0e-10 67.8 49 67.3
Dinv32917 Davidia involucrata HOM05D001000 ORTHO05D002976 3.9e-10 67.4 49 67.3
Hma1.2p1_0745F.1_g212070 Hydrangea macrophylla HOM05D001000 ORTHO05D002976 3.9e-10 67.4 54 63.0
TWI12G0467 Tripterygium wilfordii HOM05D001000 ORTHO05D002976 3.9e-10 67.4 51 64.7
COL.COLO4_09070 Corchorus olitorius HOM05D001000 ORTHO05D002976 5.1e-10 67.0 49 67.3
Gorai.004G078700 Gossypium raimondii HOM05D001000 ORTHO05D002976 5.1e-10 67.0 49 67.3
Oeu034960.1 Olea europaea HOM05D001000 ORTHO05D002976 5.1e-10 67.0 49 67.3
FAN15G0371 Fragaria x ananassa HOM05D001000 ORTHO05D002976 8.7e-10 66.2 54 63.0
FAN20G2219 Fragaria x ananassa HOM05D001000 ORTHO05D002976 8.7e-10 66.2 54 63.0
Potri.002G051200 Populus trichocarpa HOM05D001000 ORTHO05D002976 8.7e-10 66.2 54 57.4
TWI18G0499 Tripterygium wilfordii HOM05D001000 ORTHO05D002976 8.7e-10 66.2 51 64.7
TAR365G1168 Trochodendron aralioides HOM05D001000 ORTHO05D002976 8.7e-10 66.2 52 61.5
MSTRG.18244 Avicennia marina HOM05D001000 ORTHO05D002976 1.1e-09 65.9 49 65.3
Hma1.2p1_0667F.1_g199700 Hydrangea macrophylla HOM05D001000 ORTHO05D002976 1.1e-09 65.9 49 65.3
Lj1g0005440 Lotus japonicus HOM05D001000 ORTHO05D002976 1.1e-09 65.9 51 64.7
Peaxi162Scf00092g00082 Petunia axillaris HOM05D001000 ORTHO05D002976 1.1e-09 65.9 54 61.1
Duzib133G0897 Durio zibethinus HOM05D001000 ORTHO05D002976 1.5e-09 65.5 49 65.3
Migut.D00315 Erythranthe guttata HOM05D001000 ORTHO05D002976 1.5e-09 65.5 49 63.3
FvH4_1g09620 Fragaria vesca HOM05D001000 ORTHO05D002976 1.5e-09 65.5 54 63.0
FvH4_2g23310 Fragaria vesca HOM05D001000 ORTHO05D002976 1.5e-09 65.5 54 63.0
FAN19G2399 Fragaria x ananassa HOM05D001000 ORTHO05D002976 1.5e-09 65.5 54 63.0
FAN24G1656 Fragaria x ananassa HOM05D001000 ORTHO05D002976 1.5e-09 65.5 54 63.0
Gohir.D08G074400 Gossypium hirsutum HOM05D001000 ORTHO05D002976 1.5e-09 65.5 49 65.3
QL12p021288 Quercus lobata HOM05D001000 ORTHO05D002976 1.5e-09 65.5 52 63.5
TAR362G0362 Trochodendron aralioides HOM05D001000 ORTHO05D002976 1.5e-09 65.5 49 63.3
Cfa015654 Carpinus fangiana HOM05D001000 ORTHO05D002976 1.9e-09 65.1 54 61.1
Lsat_1_v5_gn_5_184400 Lactuca sativa HOM05D001000 ORTHO05D002976 1.9e-09 65.1 50 62.0
Nitab4.5_0013107g0010 Nicotiana tabacum HOM05D001000 ORTHO05D002976 1.9e-09 65.1 49 65.3
RcHm_v2.0_Chr6g0290721 Rosa chinensis HOM05D001000 ORTHO05D002976 1.9e-09 65.1 54 61.1
Cc03_g03850 Coffea canephora HOM05D001000 ORTHO05D002976 2.5e-09 64.7 54 57.4
MD03G1262500 Malus domestica HOM05D001000 ORTHO05D002976 2.5e-09 64.7 54 64.8
MD11G1283200 Malus domestica HOM05D001000 ORTHO05D002976 2.5e-09 64.7 54 64.8
PSO832G4130 Papaver somniferum HOM05D001000 ORTHO05D002976 2.5e-09 64.7 49 65.3
Potri.005G211300 Populus trichocarpa HOM05D001000 ORTHO05D002976 2.5e-09 64.7 49 63.3
Atru.chr4.2457 Acer truncatum HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
Aqoxy5G00464 Aquilegia oxysepala HOM05D001000 ORTHO05D002976 3.3e-09 64.3 48 66.7
Dinv34771 Davidia involucrata HOM05D001000 ORTHO05D002976 3.3e-09 64.3 45 68.9
FAN27G2499 Fragaria x ananassa HOM05D001000 ORTHO05D002976 3.3e-09 64.3 54 61.1
PSO210G0033 Papaver somniferum HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
Rhsim02G0025500 Rhododendron simsii HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
TAR633G0008 Trochodendron aralioides HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
TAR633G0366 Trochodendron aralioides HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
TAR633G2027 Trochodendron aralioides HOM05D001000 ORTHO05D002976 3.3e-09 64.3 49 63.3
GSVIVG01017984001 Vitis vinifera HOM05D001000 ORTHO05D002976 3.3e-09 64.3 54 59.3
Lj6P608T30 Lonicera japonica HOM05D001000 ORTHO05D002976 4.3e-09 63.9 49 63.3
Sabra10G0055700 Salix brachista HOM05D001000 ORTHO05D002976 4.3e-09 63.9 49 61.2
Nitab4.5_0004318g0090 Nicotiana tabacum HOM05D001000 ORTHO05D002976 5.7e-09 63.5 49 59.2
Oeu020076.1 Olea europaea HOM05D001000 ORTHO05D002976 5.7e-09 63.5 54 55.6
THA.LOC104817625 Tarenaya hassleriana HOM05D001000 ORTHO05D002976 5.7e-09 63.5 49 67.3
Haze_00891 Corylus avellana HOM05D001000 ORTHO05D002976 7.4e-09 63.2 49 63.3
DCAR_002384 Daucus carota HOM05D001000 ORTHO05D002976 7.4e-09 63.2 49 63.3
HanXRQChr01g0002931 Helianthus annuus HOM05D001000 ORTHO05D002976 7.4e-09 63.2 49 61.2
Actinidia09121 Actinidia chinensis HOM05D001000 ORTHO05D002976 9.7e-09 62.8 49 65.3
PSO761G0639 Papaver somniferum HOM05D001000 ORTHO05D002976 9.7e-09 62.8 49 61.2
Sabra02G0041900 Salix brachista HOM05D001000 ORTHO05D002976 9.7e-09 62.8 54 53.7
Sopen09g030950 Solanum pennellii HOM05D001000 ORTHO05D002976 9.7e-09 62.8 51 58.8
Cc01_g19340 Coffea canephora HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 61.2
DCAR_030639 Daucus carota HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 61.2
ECA248G0297 Erigeron canadensis HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 57.1
Gohir.A09G216300 Gossypium hirsutum HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 57.1
Gorai.006G239700 Gossypium raimondii HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 57.1
Sabra05G0161400 Salix brachista HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 61.2
Sabra08G0117100 Salix brachista HOM05D001000 ORTHO05D002976 1.3e-08 62.4 49 59.2
Aqoxy2G03395 Aquilegia oxysepala HOM05D001000 ORTHO05D002976 1.6e-08 62.0 49 63.3
CAN.G490.16 Capsicum annuum HOM05D001000 ORTHO05D002976 1.6e-08 62.0 51 58.8
PSO210G3543 Papaver somniferum HOM05D001000 ORTHO05D002976 1.6e-08 62.0 49 63.3
Rhsim13G0026400 Rhododendron simsii HOM05D001000 ORTHO05D002976 1.6e-08 62.0 49 61.2
PGSC0003DMG400019329 Solanum tuberosum HOM05D001000 ORTHO05D002976 1.6e-08 62.0 50 58.0
Thecc.04G232700 Theobroma cacao HOM05D001000 ORTHO05D002976 1.6e-08 62.0 49 61.2
VMungo1383G1665 Vigna mungo HOM05D001000 ORTHO05D002976 1.6e-08 62.0 49 65.3
CAN.G3.10 Capsicum annuum HOM05D001000 ORTHO05D002976 2.2e-08 61.6 49 57.1
Peaxi162Scf01248g00013 Petunia axillaris HOM05D001000 ORTHO05D002976 2.2e-08 61.6 49 57.1
Sc17g0001400 Simmondsia chinensis HOM05D001000 ORTHO05D002976 2.2e-08 61.6 50 58.0
Solyc09g082080.1 Solanum lycopersicum HOM05D001000 ORTHO05D002976 2.2e-08 61.6 51 58.8
Eucgr.H03462 Eucalyptus grandis HOM05D001000 ORTHO05D002976 2.8e-08 61.2 49 61.2
Potri.010G087200 Populus trichocarpa HOM05D001000 ORTHO05D002976 2.8e-08 61.2 49 55.1
PGSC0003DMG400032276 Solanum tuberosum HOM05D001000 ORTHO05D002976 2.8e-08 61.2 51 56.9
Ciclev10006578m.g Citrus clementina HOM05D001000 ORTHO05D002976 3.7e-08 60.8 49 63.3
DCAR_002726 Daucus carota HOM05D001000 ORTHO05D002976 3.7e-08 60.8 49 63.3
DCAR_012488 Daucus carota HOM05D001000 ORTHO05D002976 3.7e-08 60.8 49 61.2
Manes.03G178100 Manihot esculenta HOM05D001000 ORTHO05D002976 3.7e-08 60.8 49 57.1
TAR636G0381 Trochodendron aralioides HOM05D001000 ORTHO05D002976 3.7e-08 60.8 48 60.4
MSTRG.4034 Avicennia marina HOM05D001000 ORTHO05D002976 4.8e-08 60.5 49 57.1
CANSAT25G3680 Cannabis sativa HOM05D001000 ORTHO05D002976 4.8e-08 60.5 50 62.0
Gohir.D09G218700 Gossypium hirsutum HOM05D001000 ORTHO05D002976 4.8e-08 60.5 46 58.7
PGR004G0529 Punica granatum HOM05D001000 ORTHO05D002976 4.8e-08 60.5 50 60.0
SalBow4G1302 Salvia bowleyana HOM05D001000 ORTHO05D002976 4.8e-08 60.5 49 57.1
Sopen09g027110 Solanum pennellii HOM05D001000 ORTHO05D002976 4.8e-08 60.5 50 56.0
vmacro02589 Vaccinium macrocarpon HOM05D001000 ORTHO05D002976 4.8e-08 60.5 49 59.2
Actinidia36957 Actinidia chinensis HOM05D006838 ORTHO05D008915 6.3e-08 60.1 48 64.6
Potri.008G153500 Populus trichocarpa HOM05D001000 ORTHO05D002976 6.3e-08 60.1 49 57.1
Prupe.8G238800 Prunus persica HOM05D001000 ORTHO05D002976 6.3e-08 60.1 37 73.0
THA.LOC104823090 Tarenaya hassleriana HOM05D001000 ORTHO05D002976 6.3e-08 60.1 49 61.2
Manes.01G206500 Manihot esculenta HOM05D001000 ORTHO05D002976 1.1e-07 59.3 49 61.2
SGA_v2.0_scaffold138G35326 Striga asiatica HOM05D001000 ORTHO05D002976 1.1e-07 59.3 50 58.0
CDE04G1175 Ceratophyllum demersum HOM05D001000 ORTHO05D002976 1.4e-07 58.9 49 63.3
CDE07G0388 Ceratophyllum demersum HOM05D001000 ORTHO05D002976 1.4e-07 58.9 49 63.3
CsaV3_3G013290 Cucumis sativus L. HOM05D001000 ORTHO05D002976 1.4e-07 58.9 50 56.0
Sed0009461 Sechium edule HOM05D001000 ORTHO05D002976 1.8e-07 58.5 49 61.2
MELO3C006531.2 Cucumis melo HOM05D001000 ORTHO05D002976 2.4e-07 58.2 50 56.0
SGA_v2.0_scaffold1G00493 Striga asiatica HOM05D001000 ORTHO05D002976 2.4e-07 58.2 49 57.1
CANSAT78G2346 Cannabis sativa HOM05D001000 ORTHO05D002976 3.1e-07 57.8 49 53.1
COL.COLO4_21485 Corchorus olitorius HOM05D001000 ORTHO05D002976 3.1e-07 57.8 49 53.1
Sed0023818 Sechium edule HOM05D001000 ORTHO05D002976 3.1e-07 57.8 44 61.4
DCAR_018427 Daucus carota HOM05D001000 ORTHO05D002976 5.3e-07 57.0 49 59.2
Medtr1g103640 Medicago truncatula HOM05D001000 ORTHO05D002976 5.3e-07 57.0 49 44.9
TPR.G5495 Trifolium pratense HOM05D001000 ORTHO05D002976 6.9e-07 56.6 49 44.9
Ca_10891_v3 Cicer arietinum L. HOM05D001000 ORTHO05D002976 9.0e-07 56.2 49 46.9
Ca_30334_v3 Cicer arietinum L. HOM05D001000 ORTHO05D002976 9.0e-07 56.2 49 46.9
Nitab4.5_0007361g0040 Nicotiana tabacum HOM05D001000 ORTHO05D002976 9.0e-07 56.2 42 61.9
Cpa.g.sc487.2 Carica papaya HOM05D001000 ORTHO05D002976 1.2e-06 55.8 49 55.1
Sed0010763 Sechium edule HOM05D001359 ORTHO05D002976 1.2e-06 55.8 48 52.1
CiPaw.02G097500 Carya illinoinensis HOM05D001000 ORTHO05D002976 1.5e-06 55.5 54 50.0
Duzib052G0755 Durio zibethinus HOM05D001000 ORTHO05D002976 1.5e-06 55.5 49 53.1
Aa31LG9G2440 Aethionema arabicum HOM05D001000 ORTHO05D002976 2.0e-06 55.1 49 55.1
Phvul.007G057800 Phaseolus vulgaris HOM05D001000 ORTHO05D002976 2.0e-06 55.1 52 44.2
Sed0003149 Sechium edule HOM05D001000 ORTHO05D002976 2.0e-06 55.1 50 50.0
VMungo0720G2056 Vigna mungo HOM05D001000 ORTHO05D002976 2.0e-06 55.1 48 47.9
Ah.11g050530 Amaranthus hybridus HOM05D001000 ORTHO05D002976 2.6e-06 54.7 50 54.0
Lj5g0019930 Lotus japonicus HOM05D001000 ORTHO05D002976 2.6e-06 54.7 43 55.8
Carub.0007s2725 Capsella rubella HOM05D001000 ORTHO05D002976 3.4e-06 54.3 54 51.9
CsaV3_7G022480 Cucumis sativus L. HOM05D001000 ORTHO05D002976 3.4e-06 54.3 49 61.2
AL7G40990 Arabidopsis lyrata HOM05D001000 ORTHO05D002976 4.5e-06 53.9 54 51.9
EL10Ac5g10552 Beta vulgaris HOM05D001000 ORTHO05D002976 4.5e-06 53.9 46 50.0
Migut.G00342 Erythranthe guttata HOM05D001000 ORTHO05D002976 4.5e-06 53.9 48 52.1
Gohir.A09G056300 Gossypium hirsutum HOM05D001000 ORTHO05D002976 4.5e-06 53.9 54 42.6
Hma1.2p1_0822F.1_g224360 Hydrangea macrophylla HOM05D001000 ORTHO05D002976 4.5e-06 53.9 37 64.9
Sed0022966 Sechium edule HOM05D001000 ORTHO05D002976 7.7e-06 53.1 49 53.1
AT4G14860 Arabidopsis thaliana HOM05D001000 ORTHO05D002976 1.0e-05 52.8 54 51.9
CARHR221430 Cardamine hirsuta HOM05D001000 ORTHO05D002976 1.0e-05 52.8 54 50.0
Gohir.D09G055700 Gossypium hirsutum HOM05D001000 ORTHO05D002976 1.0e-05 52.8 49 44.9
Gorai.006G068700 Gossypium raimondii HOM05D001000 ORTHO05D002976 1.0e-05 52.8 49 44.9
Oeu055897.1 Olea europaea HOM05D001000 ORTHO05D002976 1.0e-05 52.8 51 51.0


User provided reference genes

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