Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 8.0e-95 350.5 190 100.0
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 8.9e-70 267.3 185 80.0
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 1.6e-63 246.5 187 75.9
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 1.1e-62 243.8 187 73.3
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 1.8e-62 243.0 187 74.9
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 3.5e-58 228.8 202 68.3
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 4.6e-58 228.4 203 70.4
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 1.0e-57 227.3 202 67.8
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 1.1e-56 223.8 202 66.3
Lalb_Chr21g0305221 Lupinus albus HOM05D002831 ORTHO05D004341 1.9e-56 223.0 155 83.2
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 4.3e-56 221.9 186 72.6
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 1.6e-55 219.9 187 71.1
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 1.2e-53 213.8 206 66.5
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 3.8e-52 208.8 187 71.1
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 1.1e-51 207.2 187 66.8
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 1.5e-48 196.8 202 63.4
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 1.9e-48 196.4 186 66.7
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 7.6e-45 184.5 207 59.4
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 4.9e-44 181.8 204 58.8
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 6.4e-44 181.4 208 61.1
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 6.4e-44 181.4 208 61.1
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 1.4e-43 180.3 192 59.4
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 3.2e-43 179.1 205 58.5
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 1.2e-42 177.2 208 57.2
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 1.8e-41 173.3 204 58.8
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.3e-41 172.9 192 62.0
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.3e-41 172.9 207 51.2
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 3.0e-41 172.6 191 58.1
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 3.0e-41 172.6 204 55.9
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.0e-41 172.6 195 54.9
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 3.9e-41 172.2 192 61.5
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 3.9e-41 172.2 189 60.8
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 3.9e-41 172.2 192 60.4
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.9e-40 169.9 206 57.3
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 5.6e-40 168.3 192 56.8
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 7.4e-40 167.9 206 56.8
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 7.4e-40 167.9 204 57.4
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 9.6e-40 167.5 207 56.5
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.6e-39 166.8 207 56.0
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.8e-39 166.0 184 62.0
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 3.7e-39 165.6 195 59.0
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 3.7e-39 165.6 201 54.2
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 4.8e-39 165.2 204 57.8
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.1e-38 164.1 190 58.9
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.8e-38 163.3 191 57.1
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 1.8e-38 163.3 191 57.1
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 2.4e-38 162.9 204 52.9
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.1e-38 162.5 191 54.5
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.1e-38 162.5 191 54.5
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 3.1e-38 162.5 189 61.4
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 4.0e-38 162.2 191 52.9
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 5.3e-38 161.8 206 55.8
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 9.0e-38 161.0 204 57.4
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.5e-37 158.7 202 57.4
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 4.5e-37 158.7 207 53.1
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 4.5e-37 158.7 192 57.3
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 5.8e-37 158.3 204 54.4
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 1.0e-36 157.5 191 57.1
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 1.7e-36 156.8 193 50.3
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.2e-36 156.4 191 58.6
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 3.8e-36 155.6 191 56.5
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 4.9e-36 155.2 194 55.2
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.5e-36 154.8 203 55.2
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 8.4e-36 154.5 203 55.2
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.4e-35 153.7 189 56.1
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.9e-35 153.3 204 53.9
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.9e-35 153.3 204 53.9
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.5e-35 152.9 194 54.6
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 3.2e-35 152.5 202 55.9
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.2e-35 152.1 204 53.9
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 4.2e-35 152.1 191 56.0
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 7.1e-35 151.4 189 57.1
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 9.3e-35 151.0 208 52.4
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 9.3e-35 151.0 190 47.4
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 9.3e-35 151.0 192 54.7
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 2.1e-34 149.8 192 54.7
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 2.1e-34 149.8 207 51.2
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 6.0e-34 148.3 188 58.5
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 7.9e-34 147.9 188 58.5
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 1.0e-33 147.5 208 51.9
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 1.8e-33 146.7 192 54.2
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 5.1e-33 145.2 189 54.0
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 6.7e-33 144.8 196 54.6
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 1.1e-32 144.1 194 53.1
Medtr1g100090 Medicago truncatula HOM05D002831 ORTHO05D004341 1.5e-32 143.7 141 68.8
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 1.5e-32 143.7 194 54.6
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.5e-32 142.9 188 57.4
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 7.4e-32 141.4 177 49.7
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 9.6e-32 141.0 203 53.7
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 2.1e-31 139.8 208 49.5
Sc19g0001290 Simmondsia chinensis HOM05D002831 ORTHO05D004341 3.7e-31 139.0 180 56.1
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 4.8e-31 138.7 208 50.5
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 1.8e-30 136.7 182 52.2
unitig_37.g11969 Utricularia gibba HOM05D002831 ORTHO05D004341 1.8e-30 136.7 187 52.9
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 2.4e-30 136.3 201 55.2
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 2.4e-30 136.3 170 50.6
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 2.4e-30 136.3 236 41.5
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 3.1e-30 136.0 182 53.3
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 5.3e-30 135.2 200 47.5
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 6.9e-30 134.8 183 51.9
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 6.9e-30 134.8 176 54.5
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 9.0e-30 134.4 189 51.3
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 1.2e-29 134.0 208 49.0
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.2e-29 134.0 208 49.0
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 1.5e-29 133.7 200 47.0
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 1.5e-29 133.7 194 50.5
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 3.4e-29 132.5 202 52.5
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 3.4e-29 132.5 208 49.0
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 4.5e-29 132.1 172 50.6
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 4.5e-29 132.1 140 54.3
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 1.3e-28 130.6 171 56.7
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.7e-28 130.2 170 52.4
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 2.2e-28 129.8 177 49.2
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.9e-28 129.4 208 48.1
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 3.8e-28 129.0 169 50.9
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.1e-27 127.5 167 54.5
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.4e-27 127.1 189 48.7
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.4e-27 127.1 208 48.1
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 4.2e-27 125.6 189 42.3
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 5.5e-27 125.2 192 52.1
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.5e-27 125.2 208 47.6
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 1.6e-26 123.6 176 46.0
SGA_v2.0_scaffold113G31691 Striga asiatica HOM05D002831 ORTHO05D008967 1.6e-26 123.6 185 52.4
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 3.5e-26 122.5 172 50.6
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 4.6e-26 122.1 171 49.7
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 4.6e-26 122.1 174 46.0
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 6.1e-26 121.7 175 49.1
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.3e-25 120.6 170 50.6
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.8e-25 120.2 191 50.8
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 2.3e-25 119.8 172 48.3
AT4G25690 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 2.3e-25 119.8 171 50.3
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 2.3e-25 119.8 147 59.2
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 3.9e-25 119.0 191 50.8
Thhalv10026278m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 5.1e-25 118.6 174 48.3
VMungo0251G0932 Vigna mungo HOM05D002831 ORTHO05D004341 5.1e-25 118.6 101 56.4
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 1.1e-24 117.5 176 48.9
Sp7g23730 Schrenkiella parvula HOM05D002831 ORTHO05D004341 1.9e-24 116.7 170 51.2
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 4.3e-24 115.5 173 48.0
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 5.7e-24 115.2 172 45.9
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.3e-23 114.0 187 45.5
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 1.3e-23 114.0 177 46.3
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 1.6e-23 113.6 177 48.6
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 2.8e-23 112.8 177 54.8
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 2.8e-23 112.8 176 45.5
CARHR233150 Cardamine hirsuta HOM05D002831 ORTHO05D004341 8.2e-23 111.3 170 47.6
unitig_0.g2470 Utricularia gibba HOM05D002831 ORTHO05D004341 8.2e-23 111.3 182 44.5
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 1.8e-22 110.2 125 51.2
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 1.8e-22 110.2 174 46.0
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 2.4e-22 109.8 176 45.5
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 2.4e-22 109.8 180 51.1
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 5.3e-22 108.6 165 51.5
BcaC06g32789 Brassica carinata HOM05D002831 ORTHO05D004341 5.3e-22 108.6 173 48.0
Migut.F01087 Erythranthe guttata HOM05D002831 ORTHO05D004341 9.0e-22 107.8 170 48.8
HPP92_008924 Vanilla planifolia HOM05D002831 ORTHO05D004341 1.5e-21 107.1 170 48.2
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.6e-21 106.3 188 44.7
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 3.4e-21 105.9 178 46.6
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 3.4e-21 105.9 200 44.5
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 3.4e-21 105.9 200 43.5
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 2.2e-20 103.2 100 60.0
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 2.9e-20 102.8 119 54.6
SGA_v2.0_scaffold10G05296 Striga asiatica HOM05D002831 ORTHO05D004341 3.8e-20 102.4 177 44.1
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 5.0e-20 102.1 189 48.1
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 1.4e-19 100.5 200 43.5
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 5.5e-19 98.6 176 51.1
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 1.2e-18 97.4 201 43.8
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 1.4e-17 94.0 194 41.8
BraA03t14689Z Brassica rapa HOM05D000048 ORTHO05D000445 6.7e-17 91.7 83 78.3
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 2.0e-16 90.1 85 65.9
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 2.0e-16 90.1 85 65.9
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 7.4e-16 88.2 203 40.4
ECA232G1618 Erigeron canadensis HOM05D002831 ORTHO05D004341 1.3e-15 87.4 195 46.7
FAN10G0429 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.3e-15 87.4 208 39.4
SEGI_15574 Sequoiadendron giganteum HOM05D002831 ORTHO05D004341 2.2e-15 86.7 81 77.8
Os02g0104200 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 3.7e-15 85.9 194 41.8
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 1.4e-14 84.0 85 58.8
Zm00001eb229390 Zea mays HOM05D002831 ORTHO05D004341 1.1e-11 74.3 199 40.2
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 4.2e-11 72.4 122 38.5
Lsat_1_v5_gn_2_131301 Lactuca sativa HOM05D002831 ORTHO05D004341 2.1e-10 70.1 175 43.4
Carub.0007s1527 Capsella rubella HOM05D002831 ORTHO05D004341 3.6e-10 69.3 65 66.2
Os06g0106900 Oryza sativa ssp. japonica HOM05D002831 ORTHO05D004341 2.0e-08 63.5 111 52.3
HanXRQChr14g0462531 Helianthus annuus HOM05D002831 ORTHO05D004341 7.4e-08 61.6 185 40.0
Lj8C18T8 Lonicera japonica HOM05D002831 ORTHO05D004341 1.7e-07 60.5 41 85.4
Lsat_1_v5_gn_9_56481 Lactuca sativa HOM05D002831 ORTHO05D004341 4.8e-07 58.9 75 68.0
Nn1g01625 Nelumbo nucifera HOM05D002831 ORTHO05D004341 6.3e-07 58.5 41 85.4


User provided reference genes

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