Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr02g0140591 Lupinus albus HOM05D001025 ORTHO05D000837 1.4e-47 192.6 96 100.0
Lalb_Chr02g0140611 Lupinus albus HOM05D001025 ORTHO05D000837 8.3e-40 166.8 88 93.2
Manes.15G029300 Manihot esculenta HOM05D001025 ORTHO05D000837 1.9e-20 102.4 92 59.8
Potri.010G087300 Populus trichocarpa HOM05D001025 ORTHO05D000837 4.3e-20 101.3 92 58.7
Sabra10G0055500 Salix brachista HOM05D001025 ORTHO05D000837 5.6e-20 100.9 92 58.7
TWI73G1098 Tripterygium wilfordii HOM05D001025 ORTHO05D000837 1.2e-19 99.8 90 57.8
Prupe.1G013900 Prunus persica HOM05D001025 ORTHO05D000837 1.6e-19 99.4 99 55.6
Ciclev10006141m.g Citrus clementina HOM05D001025 ORTHO05D000837 8.1e-19 97.1 98 52.0
MD13G1193300 Malus domestica HOM05D001025 ORTHO05D000837 8.1e-19 97.1 99 60.6
Cfa015648 Carpinus fangiana HOM05D001025 ORTHO05D000837 1.8e-18 95.9 97 58.8
Haze_00897 Corylus avellana HOM05D001025 ORTHO05D000837 1.8e-18 95.9 97 58.8
Potri.008G153200 Populus trichocarpa HOM05D001025 ORTHO05D000837 2.3e-18 95.5 92 56.5
RcHm_v2.0_Chr4g0416181 Rosa chinensis HOM05D001025 ORTHO05D000837 4.0e-18 94.7 96 56.2
Thecc.04G232300 Theobroma cacao HOM05D001025 ORTHO05D000837 4.0e-18 94.7 95 56.8
PGR004G2838 Punica granatum HOM05D001025 ORTHO05D000837 8.9e-18 93.6 91 56.0
FvH4_4g15630 Fragaria vesca HOM05D001025 ORTHO05D000837 1.5e-17 92.8 96 55.2
FAN12G1105 Fragaria x ananassa HOM05D001025 ORTHO05D000837 1.5e-17 92.8 96 55.2
FAN17G2988 Fragaria x ananassa HOM05D001025 ORTHO05D000837 1.5e-17 92.8 96 55.2
GSVIVG01017981001 Vitis vinifera HOM05D001025 ORTHO05D000837 1.5e-17 92.8 93 54.8
DCAR_024162 Daucus carota HOM05D001025 ORTHO05D000837 2.0e-17 92.4 102 50.0
CiPaw.01G166300 Carya illinoinensis HOM05D001025 ORTHO05D000837 2.6e-17 92.0 97 53.6
Sopen03g001200 Solanum pennellii HOM05D001025 ORTHO05D000837 3.4e-17 91.7 99 53.5
PGSC0003DMG400035711 Solanum tuberosum HOM05D001025 ORTHO05D000837 3.4e-17 91.7 96 55.2
AUR62033635 Chenopodium quinoa HOM05D001025 ORTHO05D000837 4.4e-17 91.3 96 56.2
Psat4g210440 Pisum sativum HOM05D001025 ORTHO05D000837 4.4e-17 91.3 98 54.1
TPR.G37877 Trifolium pratense HOM05D001025 ORTHO05D000837 4.4e-17 91.3 98 56.1
QL06p002448 Quercus lobata HOM05D001025 ORTHO05D000837 5.8e-17 90.9 92 53.3
MELO3C006533.2 Cucumis melo HOM05D001025 ORTHO05D000837 7.6e-17 90.5 95 54.7
Glyma.11G005700 Glycine max HOM05D001025 ORTHO05D000837 7.6e-17 90.5 73 63.0
FAN07G2666 Fragaria x ananassa HOM05D001025 ORTHO05D000837 9.9e-17 90.1 100 53.0
Sabra08G0116800 Salix brachista HOM05D001025 ORTHO05D000837 9.9e-17 90.1 92 55.4
Lsat_1_v5_gn_7_67141 Lactuca sativa HOM05D001025 ORTHO05D000837 1.7e-16 89.4 93 51.6
Nitab4.5_0008971g0040 Nicotiana tabacum HOM05D001025 ORTHO05D000837 2.2e-16 89.0 101 51.5
CANSAT78G0455 Cannabis sativa HOM05D001025 ORTHO05D000837 2.9e-16 88.6 100 53.0
FAN22G1211 Fragaria x ananassa HOM05D001025 ORTHO05D000837 2.9e-16 88.6 96 53.1
CSS0028570 Camellia sinensis var. sinensis HOM05D001025 ORTHO05D000837 3.7e-16 88.2 89 55.1
Sed0019699 Sechium edule HOM05D001025 ORTHO05D000837 3.7e-16 88.2 93 58.1
Ca_24397_v3 Cicer arietinum L. HOM05D001025 ORTHO05D000837 4.9e-16 87.8 95 55.8
Cc03_g03810 Coffea canephora HOM05D001025 ORTHO05D000837 4.9e-16 87.8 95 51.6
Glyma.01G238000 Glycine max HOM05D001025 ORTHO05D000837 4.9e-16 87.8 94 54.3
Nitab4.5_0000559g0040 Nicotiana tabacum HOM05D001025 ORTHO05D000837 4.9e-16 87.8 101 51.5
Peaxi162Scf00402g00013 Petunia axillaris HOM05D001025 ORTHO05D000837 4.9e-16 87.8 95 52.6
CsaV3_3G013320 Cucumis sativus L. HOM05D001025 ORTHO05D000837 6.4e-16 87.4 95 53.7
Ah.09g225110 Amaranthus hybridus HOM05D001025 ORTHO05D000837 8.3e-16 87.0 103 52.4
Hma1.2p1_0602F.1_g187350 Hydrangea macrophylla HOM05D001025 ORTHO05D000837 8.3e-16 87.0 94 52.1
Medtr5g006320 Medicago truncatula HOM05D001025 ORTHO05D000837 1.1e-15 86.7 100 56.0
Hma1.2p1_0602F.1_g187360 Hydrangea macrophylla HOM05D001025 ORTHO05D000837 1.4e-15 86.3 49 79.6
Gorai.006G239400 Gossypium raimondii HOM05D001025 ORTHO05D000837 1.9e-15 85.9 101 49.5
Rhsim04G0202000 Rhododendron simsii HOM05D001025 ORTHO05D000837 1.9e-15 85.9 93 53.8
Atru.chr4.2460 Acer truncatum HOM05D001025 ORTHO05D000837 2.4e-15 85.5 76 56.6
Gohir.D09G218400 Gossypium hirsutum HOM05D001025 ORTHO05D000837 2.4e-15 85.5 101 49.5
A01p22650 Brassica napus HOM05D001025 ORTHO05D000837 3.2e-15 85.1 86 54.7
TAR365G0317 Trochodendron aralioides HOM05D001025 ORTHO05D000837 4.1e-15 84.7 99 51.5
VMungo1215G1918 Vigna mungo HOM05D001025 ORTHO05D000837 4.1e-15 84.7 49 79.6
Aqoxy2G03393 Aquilegia oxysepala HOM05D001025 ORTHO05D000837 5.4e-15 84.3 90 50.0
Sc13g0004410 Simmondsia chinensis HOM05D001025 ORTHO05D000837 5.4e-15 84.3 82 56.1
AL7G40960 Arabidopsis lyrata HOM05D001025 ORTHO05D000837 9.2e-15 83.6 78 56.4
Carub.0007s2722 Capsella rubella HOM05D001025 ORTHO05D000837 9.2e-15 83.6 95 49.5
CAN.G1965.1 Capsicum annuum HOM05D001025 ORTHO05D000837 9.2e-15 83.6 101 45.5
Gohir.A09G216000 Gossypium hirsutum HOM05D001025 ORTHO05D000837 9.2e-15 83.6 101 48.5
LjContig00408g0008879 Lotus japonicus HOM05D001025 ORTHO05D000837 9.2e-15 83.6 79 57.0
Duzib212G0200 Durio zibethinus HOM05D001025 ORTHO05D000837 1.6e-14 82.8 96 49.0
PSO210G7739 Papaver somniferum HOM05D001025 ORTHO05D000837 1.6e-14 82.8 93 52.7
PSO761G0050 Papaver somniferum HOM05D001025 ORTHO05D000837 1.6e-14 82.8 93 52.7
THA.LOC104808547 Tarenaya hassleriana HOM05D001025 ORTHO05D000837 2.1e-14 82.4 98 50.0
Thhalv10026483m.g Eutrema salsugineum HOM05D001025 ORTHO05D000837 2.7e-14 82.0 94 50.0
AT4G14890 Arabidopsis thaliana HOM05D001025 ORTHO05D000837 4.6e-14 81.3 102 51.0
COL.COLO4_21481 Corchorus olitorius HOM05D001025 ORTHO05D000837 6.0e-14 80.9 96 47.9
Aa31LG9G2410 Aethionema arabicum HOM05D001025 ORTHO05D000837 7.8e-14 80.5 72 56.9
BraA01t02178Z Brassica rapa HOM05D001025 ORTHO05D000837 1.0e-13 80.1 93 50.5
THA.LOC104822270 Tarenaya hassleriana HOM05D001025 ORTHO05D000837 1.0e-13 80.1 73 63.0
Sp7g13030 Schrenkiella parvula HOM05D001025 ORTHO05D000837 1.3e-13 79.7 94 47.9
SGA_v2.0_scaffold111G31534 Striga asiatica HOM05D001025 ORTHO05D000837 1.3e-13 79.7 100 48.0
unitig_26.g10519 Utricularia gibba HOM05D001025 ORTHO05D000837 1.3e-13 79.7 59 64.4
BcaC09g50168 Brassica carinata HOM05D001025 ORTHO05D000837 1.7e-13 79.3 93 52.7
C01p28240 Brassica napus HOM05D001025 ORTHO05D000837 1.7e-13 79.3 93 52.7
BolC1t02753H Brassica oleracea HOM05D001025 ORTHO05D000837 1.7e-13 79.3 93 52.7
ECA240G3932 Erigeron canadensis HOM05D001025 ORTHO05D000837 1.7e-13 79.3 91 44.0
CARHR221490 Cardamine hirsuta HOM05D001025 ORTHO05D000837 2.3e-13 79.0 100 47.0
Migut.N00186 Erythranthe guttata HOM05D001025 ORTHO05D000837 2.3e-13 79.0 86 50.0
ECA232G2193 Erigeron canadensis HOM05D001025 ORTHO05D000837 3.0e-13 78.6 89 43.8
Nn4g26328 Nelumbo nucifera HOM05D001025 ORTHO05D000837 5.1e-13 77.8 94 50.0
BcaNung00322 Brassica carinata HOM05D001025 ORTHO05D000837 6.6e-13 77.4 94 46.8
SEGI_41115 Sequoiadendron giganteum HOM05D001025 ORTHO05D000837 1.1e-12 76.6 65 58.5
HanXRQChr09g0247831 Helianthus annuus HOM05D001025 ORTHO05D000837 1.9e-12 75.9 83 47.0
Lj6P608T31 Lonicera japonica HOM05D001025 ORTHO05D000837 1.9e-12 75.9 44 77.3
EL10Ac3g06445 Beta vulgaris HOM05D001025 ORTHO05D000837 4.3e-12 74.7 50 64.0
Phvul.002G045400 Phaseolus vulgaris HOM05D001025 ORTHO05D000837 7.3e-12 73.9 93 49.5
CDE04G3183 Ceratophyllum demersum HOM05D001025 ORTHO05D000837 9.6e-12 73.6 88 42.0
Zm00001eb052650 Zea mays HOM05D001025 ORTHO05D000837 1.6e-11 72.8 49 65.3
Cre07.g334800 Chlamydomonas reinhardtii HOM05D001025 ORTHO05D000837 3.6e-11 71.6 61 54.1
MBI05_g31233_MAGBIO Magnolia biondii HOM05D001025 ORTHO05D000837 6.2e-11 70.9 89 46.1
Os03g0659200 Oryza sativa ssp. japonica HOM05D001025 ORTHO05D000837 1.8e-10 69.3 49 61.2
HPP92_012134 Vanilla planifolia HOM05D001025 ORTHO05D000837 2.4e-10 68.9 49 63.3
SMO119G0064 Selaginella moellendorffii HOM05D001025 ORTHO05D000837 4.0e-10 68.2 55 56.4
Pp3c16_6230 Physcomitrium patens HOM05D001025 ORTHO05D000837 1.2e-09 66.6 89 47.2
Nn1g01857 Nelumbo nucifera HOM05D001025 ORTHO05D000837 5.8e-09 64.3 88 43.2
Mapoly0071s0018 Marchantia polymorpha HOM05D001025 ORTHO05D000837 2.2e-08 62.4 66 43.9
CBR_g49410 Chara braunii HOM05D001025 ORTHO05D000837 4.9e-08 61.2 54 55.6
ATR0697G138 Amborella trichopoda HOM05D001025 ORTHO05D000837 8.4e-08 60.5 48 56.2
CBR_g32282 Chara braunii HOM05D001025 ORTHO05D000837 1.1e-07 60.1 54 53.7
Nn7g36299 Nelumbo nucifera HOM05D001025 ORTHO05D000837 1.1e-07 60.1 95 41.1
Nn1g03611 Nelumbo nucifera HOM05D001025 ORTHO05D000837 5.4e-07 57.8 37 67.6


User provided reference genes

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