Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0023451 Lupinus albus HOM05D001228 ORTHO05D003869 5.3e-31 137.1 73 100.0
Lalb_Chr19g0124121 Lupinus albus HOM05D001228 ORTHO05D003869 6.6e-21 103.6 69 76.8
Lj1g0006910 Lotus japonicus HOM05D001228 ORTHO05D003869 7.2e-20 100.1 69 75.4
Psat3g123520 Pisum sativum HOM05D001228 ORTHO05D003869 7.2e-20 100.1 69 76.8
Glyma.09G280300 Glycine max HOM05D001228 ORTHO05D003869 1.6e-19 99.0 75 72.0
Glyma.18G208700 Glycine max HOM05D001228 ORTHO05D003869 1.6e-19 99.0 75 72.0
Phvul.008G090400 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 1.6e-19 99.0 71 74.6
arahy.Tifrunner.gnm1.ann1.HJ3R8S Arachis hypogaea HOM05D001228 ORTHO05D003869 3.6e-19 97.8 69 72.5
arahy.Tifrunner.gnm1.ann1.PP06PB Arachis hypogaea HOM05D001228 ORTHO05D003869 3.6e-19 97.8 71 70.4
arahy.Tifrunner.gnm1.ann1.QE55Y8 Arachis hypogaea HOM05D001452 ORTHO05D003869 3.6e-19 97.8 69 72.5
CiPaw.10G161500 Carya illinoinensis HOM05D001228 ORTHO05D003869 8.0e-19 96.7 71 71.8
Ca_07712_v3 Cicer arietinum L. HOM05D001228 ORTHO05D003869 1.4e-18 95.9 69 73.9
Lalb_Chr12g0207401 Lupinus albus HOM05D001228 ORTHO05D003869 1.8e-18 95.5 69 71.0
Lalb_Chr12g0207431 Lupinus albus HOM05D001228 ORTHO05D003869 1.8e-18 95.5 69 71.0
Potri.016G128200 Populus trichocarpa HOM05D001228 ORTHO05D003869 1.8e-18 95.5 72 72.2
TPR.G18651 Trifolium pratense HOM05D001228 ORTHO05D003869 1.8e-18 95.5 67 73.1
Medtr7g071110 Medicago truncatula HOM05D001228 ORTHO05D003869 3.0e-18 94.7 69 72.5
arahy.Tifrunner.gnm1.ann1.22MEII Arachis hypogaea HOM05D001228 ORTHO05D003869 4.0e-18 94.4 65 73.8
VMungo1383G0475 Vigna mungo HOM05D001228 ORTHO05D003869 4.0e-18 94.4 69 72.5
arahy.Tifrunner.gnm1.ann1.998PHG Arachis hypogaea HOM05D001228 ORTHO05D003869 5.2e-18 94.0 71 67.6
PGR102G2509 Punica granatum HOM05D001228 ORTHO05D003869 5.2e-18 94.0 69 68.1
Oeu026970.1 Olea europaea HOM05D001228 ORTHO05D003869 6.8e-18 93.6 69 71.0
Duzib128G1021 Durio zibethinus HOM05D001228 ORTHO05D003869 1.5e-17 92.4 69 69.6
TWI74G0137 Tripterygium wilfordii HOM05D001228 ORTHO05D003869 1.5e-17 92.4 69 71.0
Migut.O00918 Erythranthe guttata HOM05D001228 ORTHO05D003869 2.0e-17 92.0 69 69.6
arahy.Tifrunner.gnm1.ann1.0ZCW7G Arachis hypogaea HOM05D001228 ORTHO05D003869 2.6e-17 91.7 70 70.0
MSTRG.5536 Avicennia marina HOM05D001228 ORTHO05D003869 2.6e-17 91.7 69 66.7
HPP92_001132 Vanilla planifolia HOM05D001228 ORTHO05D003869 4.4e-17 90.9 69 68.1
GSVIVG01030259001 Vitis vinifera HOM05D001228 ORTHO05D003869 4.4e-17 90.9 69 68.1
SGA_v2.0_scaffold240G44063 Striga asiatica HOM05D001228 ORTHO05D003869 5.7e-17 90.5 69 69.6
TWI77G0871 Tripterygium wilfordii HOM05D001228 ORTHO05D003869 5.7e-17 90.5 69 69.6
Haze_21094 Corylus avellana HOM05D001228 ORTHO05D003869 7.5e-17 90.1 71 66.2
Os05g0344400 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 7.5e-17 90.1 69 62.3
Cfa017105 Carpinus fangiana HOM05D001228 ORTHO05D003869 9.8e-17 89.7 71 66.2
Zm00001eb286320 Zea mays HOM05D001228 ORTHO05D003869 9.8e-17 89.7 69 62.3
Hma1.2p1_0479F.1_g161710 Hydrangea macrophylla HOM05D001228 ORTHO05D003869 1.3e-16 89.4 71 67.6
PSO339G6233 Papaver somniferum HOM05D001228 ORTHO05D003869 1.3e-16 89.4 71 69.0
Prupe.6G285900 Prunus persica HOM05D001228 ORTHO05D003869 1.3e-16 89.4 69 71.0
Cpa.g.sc5.247 Carica papaya HOM05D001228 ORTHO05D003869 1.7e-16 89.0 69 66.7
Migut.L02054 Erythranthe guttata HOM05D001228 ORTHO05D003869 2.2e-16 88.6 69 68.1
Oeu057642.1 Olea europaea HOM05D001228 ORTHO05D003869 2.2e-16 88.6 69 68.1
Gohir.A04G095900 Gossypium hirsutum HOM05D001228 ORTHO05D003869 2.8e-16 88.2 69 65.2
Gohir.D04G135700 Gossypium hirsutum HOM05D001228 ORTHO05D003869 2.8e-16 88.2 69 65.2
Lj3A945G16 Lonicera japonica HOM05D001228 ORTHO05D003869 2.8e-16 88.2 71 66.2
PSO384G2232 Papaver somniferum HOM05D001228 ORTHO05D003869 2.8e-16 88.2 71 67.6
Lalb_Chr03g0043591 Lupinus albus HOM05D001228 ORTHO05D003869 3.7e-16 87.8 63 81.0
Gohir.A01G230132 Gossypium hirsutum HOM05D001228 ORTHO05D003869 4.9e-16 87.4 69 65.2
Gohir.D01G220101 Gossypium hirsutum HOM05D001228 ORTHO05D003869 4.9e-16 87.4 71 64.8
Gorai.002G266800 Gossypium raimondii HOM05D001228 ORTHO05D003869 4.9e-16 87.4 71 64.8
Gorai.012G119500 Gossypium raimondii HOM05D001228 ORTHO05D003869 4.9e-16 87.4 69 63.8
QL07p033687 Quercus lobata HOM05D001228 ORTHO05D003869 4.9e-16 87.4 71 66.2
SGA_v2.0_scaffold110G31183 Striga asiatica HOM05D001228 ORTHO05D003869 4.9e-16 87.4 72 65.3
unitig_27.g24875 Utricularia gibba HOM05D001228 ORTHO05D003869 4.9e-16 87.4 69 65.2
vmacro08917 Vaccinium macrocarpon HOM05D001228 ORTHO05D003869 4.9e-16 87.4 69 66.7
Rhsim04G0124100 Rhododendron simsii HOM05D001228 ORTHO05D003869 8.3e-16 86.7 69 66.7
Hund03804 Selenicereus undatus HOM05D001228 ORTHO05D003869 8.3e-16 86.7 69 65.2
Actinidia11545 Actinidia chinensis HOM05D001228 ORTHO05D003869 1.1e-15 86.3 69 62.3
Lj3g0022456 Lotus japonicus HOM05D001228 ORTHO05D003869 1.1e-15 86.3 69 68.1
Nitab4.5_0003850g0040 Nicotiana tabacum HOM05D001228 ORTHO05D003869 1.1e-15 86.3 71 62.0
SalBow4G1866 Salvia bowleyana HOM05D001228 ORTHO05D003869 1.1e-15 86.3 69 62.3
Thecc.05G005700 Theobroma cacao HOM05D001228 ORTHO05D003869 1.1e-15 86.3 69 63.8
CSS0036405 Camellia sinensis var. sinensis HOM05D001228 ORTHO05D003869 1.4e-15 85.9 69 63.8
CSS0038681 Camellia sinensis var. sinensis HOM05D001228 ORTHO05D003869 1.4e-15 85.9 69 63.8
COL.COLO4_14441 Corchorus olitorius HOM05D001228 ORTHO05D003869 1.4e-15 85.9 69 65.2
RcHm_v2.0_Chr3g0461491 Rosa chinensis HOM05D001228 ORTHO05D003869 1.4e-15 85.9 69 69.6
Atru.chr8.2349 Acer truncatum HOM05D001228 ORTHO05D003869 1.8e-15 85.5 71 66.2
DCAR_018663 Daucus carota HOM05D001228 ORTHO05D003869 1.8e-15 85.5 71 62.0
CANSAT35G0968 Cannabis sativa HOM05D001228 ORTHO05D003869 2.4e-15 85.1 73 64.4
Cc00_g13880 Coffea canephora HOM05D001228 ORTHO05D003869 2.4e-15 85.1 69 63.8
TAR623G1791 Trochodendron aralioides HOM05D001228 ORTHO05D003869 2.4e-15 85.1 71 63.4
unitig_699.g19375 Utricularia gibba HOM05D001228 ORTHO05D003869 2.4e-15 85.1 69 63.8
Ciclev10012823m.g Citrus clementina HOM05D001228 ORTHO05D003869 3.2e-15 84.7 69 62.3
Sopen10g027920 Solanum pennellii HOM05D001228 ORTHO05D003869 3.2e-15 84.7 69 62.3
PGSC0003DMG400011859 Solanum tuberosum HOM05D001228 ORTHO05D003869 3.2e-15 84.7 69 62.3
Solyc10g076300.2 Solanum lycopersicum HOM05D001228 ORTHO05D003869 4.1e-15 84.3 69 62.3
Aa31sc114G80 Aethionema arabicum HOM05D001228 ORTHO05D003869 7.0e-15 83.6 69 63.8
BraA04t18410Z Brassica rapa HOM05D001228 ORTHO05D003869 7.0e-15 83.6 73 60.3
DCAR_023992 Daucus carota HOM05D001228 ORTHO05D003869 9.2e-15 83.2 69 62.3
Sc07g0005740 Simmondsia chinensis HOM05D001228 ORTHO05D003869 9.2e-15 83.2 69 63.8
Actinidia32547 Actinidia chinensis HOM05D001228 ORTHO05D003869 1.2e-14 82.8 69 62.3
AUR62006297 Chenopodium quinoa HOM05D001228 ORTHO05D003869 1.2e-14 82.8 65 63.1
Thhalv10017282m.g Eutrema salsugineum HOM05D001228 ORTHO05D003869 1.2e-14 82.8 71 62.0
Peaxi162Scf00264g00838 Petunia axillaris HOM05D001228 ORTHO05D003869 1.2e-14 82.8 71 62.0
Solyc09g014993.1 Solanum lycopersicum HOM05D001228 ORTHO05D003869 1.2e-14 82.8 69 60.9
Sopen09g007980 Solanum pennellii HOM05D001228 ORTHO05D003869 1.2e-14 82.8 71 60.6
THA.LOC104823359 Tarenaya hassleriana HOM05D001228 ORTHO05D003869 1.2e-14 82.8 69 62.3
Actinidia20773 Actinidia chinensis HOM05D001228 ORTHO05D003869 1.6e-14 82.4 64 64.1
ATR0594G080 Amborella trichopoda HOM05D001228 ORTHO05D003869 1.6e-14 82.4 69 60.9
AL4G35760 Arabidopsis lyrata HOM05D001228 ORTHO05D003869 1.6e-14 82.4 69 62.3
MD12G1180900 Malus domestica HOM05D001228 ORTHO05D003869 1.6e-14 82.4 69 65.2
BolC4t28174H Brassica oleracea HOM05D001228 ORTHO05D003869 2.0e-14 82.0 73 60.3
FvH4_6g10520 Fragaria vesca HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 66.7
FAN02G1495 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 66.7
FAN09G3644 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 66.7
FAN14G4900 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 66.7
PSO017G0146 Papaver somniferum HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 60.9
Sed0022013 Sechium edule HOM05D001228 ORTHO05D003869 2.0e-14 82.0 69 60.9
PGSC0003DMG400011620 Solanum tuberosum HOM05D001228 ORTHO05D003869 2.0e-14 82.0 71 60.6
Carub.0004s2046 Capsella rubella HOM05D001228 ORTHO05D003869 2.7e-14 81.6 63 66.7
Hma1.2p1_0501F.1_g167290 Hydrangea macrophylla HOM05D001228 ORTHO05D003869 2.7e-14 81.6 71 63.4
Nitab4.5_0000047g0150 Nicotiana tabacum HOM05D001228 ORTHO05D003869 2.7e-14 81.6 71 59.2
Nitab4.5_0001226g0040 Nicotiana tabacum HOM05D001228 ORTHO05D003869 2.7e-14 81.6 71 59.2
BcaB01g03681 Brassica carinata HOM05D001228 ORTHO05D003869 3.5e-14 81.3 69 62.3
BcaB06g29055 Brassica carinata HOM05D001228 ORTHO05D003869 3.5e-14 81.3 73 60.3
BcaC02g07463 Brassica carinata HOM05D001228 ORTHO05D003869 3.5e-14 81.3 73 60.3
A04p29430 Brassica napus HOM05D001228 ORTHO05D003869 3.5e-14 81.3 73 60.3
C04p66720 Brassica napus HOM05D001228 ORTHO05D003869 3.5e-14 81.3 73 60.3
Eucgr.A00628 Eucalyptus grandis HOM05D001228 ORTHO05D003869 3.5e-14 81.3 69 56.5
Lsat_1_v5_gn_8_103660 Lactuca sativa HOM05D001228 ORTHO05D003869 3.5e-14 81.3 69 58.0
Lj2A66T65 Lonicera japonica HOM05D001228 ORTHO05D003869 3.5e-14 81.3 71 62.0
PSO349G0256 Papaver somniferum HOM05D001228 ORTHO05D003869 3.5e-14 81.3 69 60.9
Peaxi162Scf00744g00227 Petunia axillaris HOM05D001228 ORTHO05D003869 3.5e-14 81.3 71 59.2
SHI12886 Sapria himalayana HOM05D001228 ORTHO05D003869 3.5e-14 81.3 69 65.2
CARHR133170 Cardamine hirsuta HOM05D001228 ORTHO05D003869 4.6e-14 80.9 69 60.9
Lj3g0017137 Lotus japonicus HOM05D001228 ORTHO05D003869 4.6e-14 80.9 62 67.7
MD04G1167600 Malus domestica HOM05D001228 ORTHO05D003869 4.6e-14 80.9 69 63.8
Nn2g13279 Nelumbo nucifera HOM05D001228 ORTHO05D003869 4.6e-14 80.9 65 64.6
vmacro08916 Vaccinium macrocarpon HOM05D001228 ORTHO05D003869 4.6e-14 80.9 69 60.9
EL10Ac7g16791 Beta vulgaris HOM05D001228 ORTHO05D003869 5.9e-14 80.5 65 63.1
A03p21340 Brassica napus HOM05D001228 ORTHO05D003869 5.9e-14 80.5 63 68.3
PGR031G3439 Punica granatum HOM05D001228 ORTHO05D003869 5.9e-14 80.5 69 55.1
Rhsim04G0124200 Rhododendron simsii HOM05D001228 ORTHO05D003869 5.9e-14 80.5 71 64.8
TPR.G5191 Trifolium pratense HOM05D001228 ORTHO05D003869 5.9e-14 80.5 57 70.2
Ah.08g209980 Amaranthus hybridus HOM05D001228 ORTHO05D003869 7.8e-14 80.1 69 58.0
BcaC02g07462 Brassica carinata HOM05D001228 ORTHO05D003869 7.8e-14 80.1 64 65.6
FAN05G0078 Fragaria x ananassa HOM05D001228 ORTHO05D003869 7.8e-14 80.1 69 65.2
FAN05G2526 Fragaria x ananassa HOM05D001228 ORTHO05D003869 7.8e-14 80.1 69 65.2
HanXRQChr16g0509781 Helianthus annuus HOM05D001228 ORTHO05D003869 7.8e-14 80.1 65 61.5
Lalb_Chr00c03g0404211 Lupinus albus HOM05D001228 ORTHO05D003869 7.8e-14 80.1 55 76.4
Aqoxy4G02713 Aquilegia oxysepala HOM05D001228 ORTHO05D003869 1.0e-13 79.7 71 59.2
AT2G38480 Arabidopsis thaliana HOM05D001228 ORTHO05D003869 1.0e-13 79.7 69 60.9
MELO3C009126.2 Cucumis melo HOM05D001228 ORTHO05D003869 1.0e-13 79.7 62 61.3
ECA236G4070 Erigeron canadensis HOM05D001410 ORTHO05D003969 1.0e-13 79.7 69 58.0
Glyma.01G128000 Glycine max HOM05D001228 ORTHO05D003869 1.0e-13 79.7 67 61.2
Phvul.010G062800 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 1.0e-13 79.7 70 60.0
Psat7g249480 Pisum sativum HOM05D001228 ORTHO05D003869 1.0e-13 79.7 63 63.5
TPR.G29222 Trifolium pratense HOM05D001228 ORTHO05D003869 1.0e-13 79.7 63 61.9
BraA03t11369Z Brassica rapa HOM05D001228 ORTHO05D003869 1.3e-13 79.3 63 66.7
Duzib093G0175 Durio zibethinus HOM05D001228 ORTHO05D003869 1.3e-13 79.3 69 60.9
Nitab4.5_0000355g0220 Nicotiana tabacum HOM05D001228 ORTHO05D003869 1.3e-13 79.3 71 59.2
Prupe.6G285800 Prunus persica HOM05D001228 ORTHO05D003869 2.3e-13 78.6 69 62.3
CsaV3_3G033340 Cucumis sativus L. HOM05D001228 ORTHO05D003869 2.9e-13 78.2 63 60.3
Aa31LG5G23870 Aethionema arabicum HOM05D001228 ORTHO05D003869 3.9e-13 77.8 69 59.4
ClCG10G022510 Citrullus lanatus HOM05D001228 ORTHO05D003869 3.9e-13 77.8 63 58.7
Medtr4g013270 Medicago truncatula HOM05D001228 ORTHO05D003869 3.9e-13 77.8 63 63.5
Sp4g20810 Schrenkiella parvula HOM05D001228 ORTHO05D003869 6.6e-13 77.0 63 63.5
arahy.Tifrunner.gnm1.ann1.P8LEZG Arachis hypogaea HOM05D001228 ORTHO05D003869 2.5e-12 75.1 53 71.7
Os03g0298300 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 3.3e-12 74.7 71 54.9
Zm00001eb013830 Zea mays HOM05D001228 ORTHO05D003869 3.3e-12 74.7 71 53.5
Zm00001eb212010 Zea mays HOM05D001228 ORTHO05D003869 9.5e-12 73.2 60 55.0
Eucgr.K02941 Eucalyptus grandis HOM05D001228 ORTHO05D003869 1.2e-11 72.8 66 60.6
DCAR_028890 Daucus carota HOM05D001228 ORTHO05D003869 8.0e-11 70.1 75 53.3
DCAR_028892 Daucus carota HOM05D001228 ORTHO05D003869 8.0e-11 70.1 75 53.3
Sc19g0002630 Simmondsia chinensis HOM05D001228 ORTHO05D003869 8.0e-11 70.1 65 58.5
Phvul.010G062600 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 4.0e-10 67.8 70 57.1
Os03g0817100 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 5.2e-10 67.4 65 47.7
MBI15_g01645_MAGBIO Magnolia biondii HOM05D001228 ORTHO05D003869 9.8e-09 63.2 54 59.3
Haze_21095 Corylus avellana HOM05D001228 ORTHO05D003869 3.2e-07 58.2 92 39.1
Zm00001eb331480 Zea mays HOM05D001228 ORTHO05D003869 3.2e-07 58.2 67 44.8
Cfa017104 Carpinus fangiana HOM05D001228 ORTHO05D003869 9.2e-07 56.6 101 38.6
Cfa021148 Carpinus fangiana HOM05D001228 ORTHO05D003869 9.2e-07 56.6 101 38.6
vmacro20331 Vaccinium macrocarpon HOM05D001228 ORTHO05D003869 9.2e-07 56.6 63 50.8
CsaV3_4G026670 Cucumis sativus L. HOM05D001228 ORTHO05D003869 1.2e-06 56.2 69 44.9
SEGI_01953 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 1.6e-06 55.8 58 48.3
Sed0001885 Sechium edule HOM05D001228 ORTHO05D003869 4.6e-06 54.3 67 46.3
Haze_21096 Corylus avellana HOM05D001228 ORTHO05D003869 6.0e-06 53.9 82 45.1


User provided reference genes

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