Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 1.5e-189 666.0 335 100.0
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 2.5e-131 472.6 338 75.4
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 4.0e-81 305.8 314 59.6
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 3.8e-63 246.1 331 51.1
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 4.3e-59 232.6 352 47.7
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 6.2e-58 228.8 345 47.8
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 1.1e-57 228.0 336 47.6
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.3e-55 221.1 327 47.4
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 1.4e-54 217.6 349 46.7
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 5.4e-54 215.7 342 44.7
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 7.1e-54 215.3 334 44.9
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 3.5e-53 213.0 333 44.4
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 3.5e-53 213.0 349 44.7
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 6.0e-53 212.2 343 46.4
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 7.8e-53 211.8 343 43.4
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 1.3e-52 211.1 351 44.2
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 1.3e-52 211.1 348 47.7
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 3.0e-52 209.9 342 44.7
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 3.0e-52 209.9 333 47.1
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 8.7e-52 208.4 342 43.9
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 1.5e-51 207.6 324 47.8
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 5.6e-51 205.7 343 44.6
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 9.6e-51 204.9 341 46.0
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 1.3e-50 204.5 339 44.8
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.3e-50 204.5 336 45.8
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.6e-50 204.1 339 44.8
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 2.8e-50 203.4 344 44.5
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 4.8e-50 202.6 355 41.1
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 8.1e-50 201.8 332 45.8
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 1.1e-49 201.4 345 44.3
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.8e-49 200.7 346 43.4
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 1.8e-49 200.7 341 44.9
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 6.9e-49 198.7 339 44.8
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.5e-48 197.6 347 43.2
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.5e-48 197.6 346 42.8
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.7e-47 194.1 347 42.7
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 1.7e-47 194.1 343 44.6
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 2.2e-47 193.7 330 42.4
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.4e-46 191.0 341 40.8
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 1.9e-46 190.7 341 41.1
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 2.4e-46 190.3 331 44.4
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 3.2e-46 189.9 342 43.0
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 4.2e-46 189.5 344 43.9
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 1.2e-45 188.0 334 43.7
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 1.2e-45 188.0 329 41.0
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 1.2e-45 188.0 352 40.6
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 2.1e-45 187.2 341 41.6
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 2.7e-45 186.8 341 41.9
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.7e-45 186.8 339 40.4
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 3.5e-45 186.4 345 44.1
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 8.7e-44 181.8 331 43.5
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.1e-43 181.4 346 41.3
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 1.1e-43 181.4 322 44.4
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 4.3e-43 179.5 340 42.1
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 9.6e-43 178.3 351 39.9
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 9.6e-43 178.3 341 41.3
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 2.4e-41 173.7 331 40.2
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 4.0e-41 172.9 323 41.5
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 5.3e-41 172.6 357 39.5
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 1.7e-39 167.5 347 39.2
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.9e-39 166.8 316 39.6
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 8.4e-39 165.2 334 38.6
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 4.2e-38 162.9 338 41.7
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 7.1e-38 162.2 336 38.7
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 5.1e-36 156.0 211 49.3
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 5.1e-36 156.0 211 49.3
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 5.1e-36 156.0 339 38.1
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 8.7e-36 155.2 324 36.7
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 8.7e-36 155.2 211 48.3
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 8.7e-36 155.2 211 48.3
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 1.1e-35 154.8 322 39.4
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 1.1e-35 154.8 218 47.2
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 1.1e-35 154.8 218 47.2
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 1.5e-35 154.5 211 48.3
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 3.7e-34 149.8 374 36.1
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 8.2e-34 148.7 351 37.6
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 2.4e-33 147.1 373 35.1
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 4.0e-33 146.4 345 36.2
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 4.0e-33 146.4 318 35.8
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 3.4e-32 143.3 361 34.9
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 1.7e-31 141.0 319 36.7
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 4.9e-31 139.4 315 36.8
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 1.4e-30 137.9 328 35.1
Duzib106G0876 Durio zibethinus HOM05D004499 ORTHO05D004928 1.9e-30 137.5 332 35.5
MELO3C014257.2 Cucumis melo HOM05D004499 ORTHO05D004928 3.2e-30 136.7 319 35.4
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 9.3e-30 135.2 329 35.9
ClCG04G008860 Citrullus lanatus HOM05D004499 ORTHO05D004928 1.2e-29 134.8 319 36.1
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 1.6e-29 134.4 348 35.3
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 1.6e-29 134.4 333 36.3
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 1.8e-28 131.0 338 33.4
CsaV3_6G039360 Cucumis sativus L. HOM05D004499 ORTHO05D004928 1.8e-28 131.0 331 35.3
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 1.1e-27 128.3 242 41.3
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 2.5e-27 127.1 352 34.7
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 2.5e-27 127.1 330 34.8
Thhalv10016942m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 5.7e-27 125.9 352 33.2
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 9.7e-27 125.2 233 40.3
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 1.3e-26 124.8 233 39.9
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 1.3e-26 124.8 233 39.9
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 1.3e-26 124.8 337 34.7
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 3.7e-26 123.2 315 38.1
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 3.7e-26 123.2 332 33.7
MD12G1122400 Malus domestica HOM05D004499 ORTHO05D004928 4.8e-26 122.9 204 41.7
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 8.2e-26 122.1 236 38.6
Gohir.D04G114901 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.1e-25 121.7 171 48.5
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 4.1e-25 119.8 233 38.6
Manes.12G048251 Manihot esculenta HOM05D004499 ORTHO05D004928 4.1e-25 119.8 198 42.4
Manes.08G004906 Manihot esculenta HOM05D004499 ORTHO05D004928 5.3e-25 119.4 198 42.4
Manes.05G197001 Manihot esculenta HOM05D004499 ORTHO05D004928 6.9e-25 119.0 202 42.1
AUR62040029 Chenopodium quinoa HOM05D004499 ORTHO05D004928 9.0e-25 118.6 279 34.4
Sed0011318 Sechium edule HOM05D004499 ORTHO05D004928 9.0e-25 118.6 212 44.8
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 1.5e-24 117.9 331 32.3
Manes.05G197300 Manihot esculenta HOM05D004499 ORTHO05D004928 7.6e-24 115.5 232 38.4
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 1.3e-23 114.8 278 35.3
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 2.2e-23 114.0 195 41.0
Carub.0006s0191 Capsella rubella HOM05D004499 ORTHO05D004928 2.9e-23 113.6 280 37.1
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 5.0e-23 112.8 383 32.1
Aa31LG5G22320 Aethionema arabicum HOM05D004499 ORTHO05D004928 1.9e-22 110.9 332 33.7
HanXRQChr02g0051991 Helianthus annuus HOM05D004499 ORTHO05D004928 1.9e-22 110.9 127 52.8
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 1.9e-22 110.9 319 33.2
AL4G33450 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 2.5e-22 110.5 349 33.8
COL.COLO4_27061 Corchorus olitorius HOM05D004499 ORTHO05D004928 2.5e-22 110.5 88 71.6
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 4.2e-22 109.8 242 34.7
BcaB02g09303 Brassica carinata HOM05D004499 ORTHO05D004928 5.5e-22 109.4 347 32.6
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 5.5e-22 109.4 218 41.7
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 1.2e-21 108.2 339 32.4
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 1.2e-21 108.2 304 35.5
BcaC02g11837 Brassica carinata HOM05D004499 ORTHO05D004928 1.6e-21 107.8 343 32.1
C04p10830 Brassica napus HOM05D004499 ORTHO05D004928 1.6e-21 107.8 343 32.1
AT2G37100 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 2.1e-21 107.5 316 34.2
Carub.0004s1899 Capsella rubella HOM05D004499 ORTHO05D004928 3.6e-21 106.7 322 35.1
Sc02g0001920 Simmondsia chinensis HOM05D004499 ORTHO05D004928 3.6e-21 106.7 290 34.1
SGA_v2.0_scaffold126G33909 Striga asiatica HOM05D004499 ORTHO05D004928 7.9e-21 105.5 320 32.2
A05p08740 Brassica napus HOM05D004499 ORTHO05D004928 1.0e-20 105.1 343 32.4
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 1.8e-20 104.4 186 39.8
BolC4t22678H Brassica oleracea HOM05D004499 ORTHO05D004928 3.0e-20 103.6 339 31.6
BraA05t19842Z Brassica rapa HOM05D004499 ORTHO05D004928 3.9e-20 103.2 343 32.1
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 3.9e-20 103.2 347 34.3
PSO339G1230 Papaver somniferum HOM05D004499 ORTHO05D004928 8.8e-20 102.1 339 31.9
Peaxi162Scf00005g04016 Petunia axillaris HOM05D004499 ORTHO05D004928 4.3e-19 99.8 70 70.0
TPR.G36959 Trifolium pratense HOM05D004499 ORTHO05D004928 9.7e-19 98.6 294 33.3
PSO384G2831 Papaver somniferum HOM05D004499 ORTHO05D004928 2.8e-18 97.1 330 32.1
SHI12538 Sapria himalayana HOM05D004499 ORTHO05D004928 2.8e-18 97.1 196 40.8
RhsimUnG0115800 Rhododendron simsii HOM05D004499 ORTHO05D004928 1.1e-17 95.1 291 34.7
Actinidia40043 Actinidia chinensis HOM05D004499 ORTHO05D004928 3.1e-17 93.6 318 30.8
AUR62044753 Chenopodium quinoa HOM05D004499 ORTHO05D004928 5.3e-17 92.8 290 31.7
PSO063G6372 Papaver somniferum HOM05D004499 ORTHO05D004928 9.1e-17 92.0 249 33.3
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 7.7e-16 89.0 439 27.3
SGA_v2.0_scaffold94G28675 Striga asiatica HOM05D004499 ORTHO05D004928 1.7e-15 87.8 318 30.2
PSO339G0805 Papaver somniferum HOM05D004499 ORTHO05D004928 1.1e-11 75.1 357 28.9
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 2.6e-11 73.9 286 29.7
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 7.4e-11 72.4 229 31.0
PSO675G0887 Papaver somniferum HOM05D004118 ORTHO05D004686 7.4e-11 72.4 299 27.8
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 5.3e-09 66.2 286 28.0
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 1.5e-08 64.7 85 43.5
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 1.5e-08 64.7 347 25.9
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 7.7e-08 62.4 249 28.9
Dinv20215 Davidia involucrata HOM05D004118 ORTHO05D004686 1.0e-07 62.0 320 26.2
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 1.0e-07 62.0 358 26.8
ATR0602G295 Amborella trichopoda HOM05D004118 ORTHO05D004686 1.3e-07 61.6 283 29.7
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 1.3e-07 61.6 340 27.1
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 1.7e-07 61.2 377 26.8
Actinidia07500 Actinidia chinensis HOM05D004118 ORTHO05D004686 3.8e-07 60.1 358 27.4
Nn4g25115 Nelumbo nucifera HOM05D004499 ORTHO05D004928 3.8e-07 60.1 146 36.3
TWI39G0897 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 6.5e-07 59.3 385 23.6
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 2.5e-06 57.4 365 24.1
SalBow8G5405 Salvia bowleyana HOM05D004118 ORTHO05D004686 2.5e-06 57.4 332 26.5
TWI38G2280 Tripterygium wilfordii HOM05D004118 ORTHO05D004686 2.5e-06 57.4 356 24.4
Sed0016267 Sechium edule HOM05D004118 ORTHO05D004686 3.2e-06 57.0 320 27.5
Zm00001eb265390 Zea mays HOM05D004499 ORTHO05D004928 4.2e-06 56.6 239 31.8
PSO017G1325 Papaver somniferum HOM05D004118 ORTHO05D004686 5.5e-06 56.2 47 53.2
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 7.2e-06 55.8 133 33.8
HanXRQChr15g0494281 Helianthus annuus HOM05D004118 ORTHO05D004686 9.4e-06 55.5 255 27.1


User provided reference genes

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