Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 1.0e-57 226.5 112 100.0
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 3.0e-49 198.4 112 88.4
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 3.0e-49 198.4 112 88.4
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 3.0e-49 198.4 112 88.4
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 6.9e-46 187.2 111 85.6
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 4.8e-39 164.5 100 82.0
Lsat_1_v5_gn_7_67841 Lactuca sativa HOM05D000533 ORTHO05D011488 9.1e-30 133.7 71 88.7
Phvul.009G072400 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 9.1e-30 133.7 85 81.2
Aqoxy3G01142 Aquilegia oxysepala HOM05D000533 ORTHO05D011488 4.5e-29 131.3 71 88.7
CiPaw.12G057700 Carya illinoinensis HOM05D000533 ORTHO05D011488 7.7e-29 130.6 71 87.3
ATR0645G003 Amborella trichopoda HOM05D000533 ORTHO05D011488 5.0e-28 127.9 63 95.2
Lalb_Chr00c54g0413551 Lupinus albus HOM05D000533 ORTHO05D011488 5.0e-28 127.9 63 95.2
CARHR287180 Cardamine hirsuta HOM05D000533 ORTHO05D011488 6.5e-28 127.5 71 85.9
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.4e-27 126.3 68 86.8
HanXRQChr10g0297221 Helianthus annuus HOM05D000533 ORTHO05D011488 1.9e-27 125.9 71 84.5
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 9.4e-27 123.6 75 80.0
unitig_87.g27978 Utricularia gibba HOM05D000533 ORTHO05D011488 1.6e-26 122.9 72 81.9
Cpa.g.sc263.10 Carica papaya HOM05D000533 ORTHO05D011488 1.8e-25 119.4 63 90.5
CsaV3_6G023980 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.8e-25 119.4 63 90.5
CsaV3_6G025260 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.8e-25 119.4 63 90.5
CsaV3_UNG208480 Cucumis sativus L. HOM05D000533 ORTHO05D011488 1.8e-25 119.4 63 90.5
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.8e-25 119.4 64 87.5
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 3.9e-25 118.2 60 91.7
Lalb_Chr00c24g0407321 Lupinus albus HOM05D000533 ORTHO05D011488 2.0e-21 105.9 54 90.7
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 2.0e-21 105.9 62 82.3
Solyc00g500183.1 Solanum lycopersicum HOM05D000533 ORTHO05D011488 4.5e-21 104.8 56 85.7
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.6e-18 96.3 54 85.2
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 2.7e-18 95.5 66 72.7
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 8.0e-18 94.0 54 83.3
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 8.0e-18 94.0 54 83.3
GSVIVG01004958001 Vitis vinifera HOM05D000533 ORTHO05D001069 1.0e-17 93.6 48 91.7
arahy.Tifrunner.gnm1.ann1.04CCAU Arachis hypogaea HOM05D021481 ORTHO05D021486 1.4e-17 93.2 64 79.7
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 4.0e-17 91.7 54 81.5
SHI36143 Sapria himalayana HOM05D000533 ORTHO05D011488 4.0e-17 91.7 54 81.5
Sp5g20290 Schrenkiella parvula HOM05D000533 ORTHO05D011488 6.7e-17 90.9 62 72.6
PGSC0003DMG400013204 Solanum tuberosum HOM05D000533 ORTHO05D011488 6.7e-17 90.9 48 87.5
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 2.0e-16 89.4 47 87.2
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 2.0e-16 89.4 47 89.4
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 2.6e-16 89.0 50 84.0
Nitab4.5_0000859g0010 Nicotiana tabacum HOM05D000533 ORTHO05D011488 1.3e-15 86.7 58 72.4
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.8e-14 82.8 44 88.6
GSVIVG01004967001 Vitis vinifera HOM05D000533 ORTHO05D011488 3.1e-14 82.0 48 83.3
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 7.0e-14 80.9 55 69.1
Nitab4.5_0001034g0060 Nicotiana tabacum HOM05D000533 ORTHO05D011488 1.6e-13 79.7 49 77.6
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.7e-13 79.0 53 69.8
SHI51311 Sapria himalayana HOM05D000533 ORTHO05D011488 1.2e-10 70.1 54 70.4
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.7e-10 68.2 36 86.1
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 8.0e-10 67.4 48 62.5
Peaxi162Scf00197g00046 Petunia axillaris HOM05D000533 ORTHO05D011488 2.3e-09 65.9 38 78.9
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 4.0e-09 65.1 52 53.8
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 6.8e-09 64.3 47 61.7
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 6.8e-09 64.3 53 54.7
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 4.4e-08 61.6 47 59.6
arahy.Tifrunner.gnm1.ann1.18Y7ZR Arachis hypogaea HOM05D012508 ORTHO05D011743 1.3e-07 60.1 30 96.7
arahy.Tifrunner.gnm1.ann1.92IF5I Arachis hypogaea HOM05D012508 ORTHO05D011743 6.3e-07 57.8 32 87.5
arahy.Tifrunner.gnm1.ann1.BEZ08J Arachis hypogaea HOM05D012508 ORTHO05D011743 8.3e-07 57.4 30 93.3
arahy.Tifrunner.gnm1.ann1.HN7ZH9 Arachis hypogaea HOM05D012508 ORTHO05D011743 8.3e-07 57.4 30 93.3
arahy.Tifrunner.gnm1.ann1.TXQ6WE Arachis hypogaea HOM05D012508 ORTHO05D011743 8.3e-07 57.4 30 93.3
BolSC28t60428H Brassica oleracea HOM05D000533 ORTHO05D011488 1.4e-06 56.6 30 86.7


User provided reference genes

Program Settings