Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.0e-61 240.0 129 100.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 7.9e-54 213.8 129 86.8
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 7.9e-54 213.8 128 88.3
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.3e-53 212.2 128 85.2
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 3.9e-53 211.5 128 87.5
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.9e-53 211.5 128 85.9
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.5e-52 209.5 128 85.2
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.2e-51 205.7 129 82.9
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.8e-51 204.5 128 84.4
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 6.3e-51 204.1 129 82.2
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 5.3e-50 201.1 129 80.6
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.0e-49 199.1 121 86.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 79.7
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 5.0e-48 194.5 129 79.1
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 129 78.3
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 77.3
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 78.9
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 76.6
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 4.2e-47 191.4 128 75.8
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.2e-47 190.7 128 76.6
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 7.2e-47 190.7 128 78.1
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.6e-46 189.5 129 76.7
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.1e-46 189.1 128 77.3
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 77.3
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.7e-46 188.7 129 77.5
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 75.8
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 77.3
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 75.0
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 75.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 75.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 4.7e-46 188.0 129 75.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 77.3
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 74.2
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.0e-45 186.8 129 75.2
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.0e-45 186.8 129 76.0
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 76.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.4e-45 186.4 131 76.3
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.4e-45 186.4 126 76.2
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.4e-45 186.4 126 76.2
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 75.0
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.8e-45 186.0 129 75.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.8e-45 186.0 128 75.0
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 73.4
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.3e-45 185.7 122 78.7
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 75.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 6.7e-45 184.1 129 73.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 8.8e-45 183.7 128 74.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 8.8e-45 183.7 128 73.4
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 73.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.5e-44 183.0 129 74.4
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 2.0e-44 182.6 127 74.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.6e-44 182.2 128 74.2
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.6e-44 182.2 129 72.9
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.3e-44 181.8 129 73.6
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.4e-44 181.4 128 73.4
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 5.7e-44 181.0 128 70.3
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.5e-44 180.6 129 73.6
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.5e-44 180.6 129 73.6
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 7.5e-44 180.6 128 74.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 9.7e-44 180.3 128 73.4
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.3e-43 179.9 126 74.6
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 73.4
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.2e-43 179.1 119 78.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.3e-43 177.6 125 73.6
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 6.3e-43 177.6 128 71.1
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 8.2e-43 177.2 128 71.1
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-42 176.8 125 72.8
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.1e-42 176.8 126 73.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.8e-42 176.0 129 69.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.4e-42 175.6 128 70.3
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.1e-42 175.3 128 70.3
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.3e-42 174.5 135 70.4
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 9.1e-42 173.7 128 73.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 9.1e-42 173.7 127 70.1
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 71.1
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.0e-41 172.6 121 76.9
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 3.5e-41 171.8 126 69.0
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 3.5e-41 171.8 104 86.5
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.2e-40 169.1 125 72.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 5.0e-40 167.9 128 69.5
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 8.5e-40 167.2 129 70.5
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.9e-39 166.0 113 77.9
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 7.2e-39 164.1 120 73.3
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 9.4e-39 163.7 119 73.1
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.4e-39 163.7 130 66.9
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.6e-38 162.9 129 69.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 2.3e-37 159.1 129 69.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 8.8e-37 157.1 137 62.0
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.5e-36 156.4 172 53.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.2e-35 152.5 129 64.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.2e-35 152.5 129 65.1
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.2e-35 152.5 129 64.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 4.1e-34 148.3 124 66.9
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 5.4e-34 147.9 104 76.0
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 9.1e-34 147.1 128 57.0
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 9.1e-34 147.1 128 57.0
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 8.6e-32 140.6 186 48.9
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.5e-31 137.9 96 72.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.2e-30 136.7 99 70.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-30 136.7 116 63.8
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-29 133.7 104 66.3
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.2e-28 130.2 101 71.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 2.8e-27 125.6 120 52.5
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.8e-26 122.9 92 69.6
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.0e-24 117.1 99 56.6
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 3.3e-23 112.1 92 64.1
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.6e-23 111.3 70 78.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 9.5e-23 110.5 106 63.2
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 3.0e-21 105.5 92 63.0
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 3.4e-20 102.1 92 60.9
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.7e-19 99.8 63 73.0
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.2e-19 99.4 93 59.1
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.2e-17 93.6 62 74.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 3.5e-17 92.0 62 72.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 6.6e-16 87.8 66 69.7
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 8.6e-16 87.4 62 67.7
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.5e-15 86.7 62 67.7
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 2.5e-15 85.9 55 83.6
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 3.6e-14 82.0 65 67.7
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 8.0e-14 80.9 64 65.6
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 5.4e-10 68.2 114 30.7
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.3e-08 63.5 113 31.0
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.9e-07 59.7 54 64.8
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.5e-07 59.3 61 42.6
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 3.3e-07 58.9 37 78.4


User provided reference genes

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