Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 6.4e-103 377.5 198 100.0
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 2.4e-81 305.8 197 77.2
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 5.3e-73 278.1 197 71.6
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 1.5e-72 276.6 198 70.7
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 5.8e-72 274.6 199 70.4
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 1.3e-71 273.5 197 67.5
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 3.8e-71 271.9 197 68.5
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 4.9e-71 271.6 198 68.7
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 6.4e-71 271.2 197 67.5
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 6.4e-71 271.2 236 61.0
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 6.4e-71 271.2 197 66.5
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 1.4e-70 270.0 198 67.7
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 2.4e-70 269.2 197 68.5
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 3.0e-68 262.3 197 64.5
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 5.1e-68 261.5 198 67.7
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 6.7e-68 261.2 197 65.5
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 8.7e-68 260.8 198 68.2
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 1.1e-67 260.4 197 65.5
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 5.6e-67 258.1 197 62.9
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 7.4e-67 257.7 197 63.5
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 9.6e-67 257.3 198 63.1
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.6e-66 256.5 197 62.9
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 2.1e-66 256.1 184 69.0
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 8.1e-66 254.2 197 62.9
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 8.1e-66 254.2 199 63.3
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 6.9e-65 251.1 198 66.2
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 6.9e-65 251.1 198 63.6
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 1.2e-64 250.4 197 61.9
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.5e-64 250.0 198 63.1
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.5e-64 250.0 198 63.6
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 1.5e-64 250.0 198 63.6
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 2.6e-64 249.2 198 63.1
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.5e-64 248.4 198 62.6
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 1.3e-63 246.9 203 60.1
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 2.9e-63 245.7 197 64.5
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 3.8e-63 245.4 191 62.8
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 4.9e-63 245.0 198 63.6
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 1.1e-62 243.8 198 63.6
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 5.5e-62 241.5 184 64.1
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 7.1e-62 241.1 203 58.6
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.7e-61 239.2 184 65.2
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 6.0e-61 238.0 184 63.0
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 6.7e-60 234.6 205 58.0
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 1.5e-59 233.4 198 59.6
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.3e-59 232.3 198 58.6
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 4.3e-59 231.9 185 61.1
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.6e-58 229.9 185 62.7
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.6e-58 229.9 198 58.1
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 3.7e-58 228.8 196 58.2
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 1.1e-57 227.3 187 59.9
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 1.8e-57 226.5 197 55.3
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 3.1e-57 225.7 154 70.8
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 6.9e-57 224.6 198 57.1
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 9.0e-57 224.2 206 55.8
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 4.5e-56 221.9 197 54.8
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 1.0e-55 220.7 167 67.1
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 8.4e-55 217.6 199 57.3
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 8.4e-55 217.6 197 54.3
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.4e-54 216.9 190 57.9
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 2.5e-54 216.1 197 52.8
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 7.2e-54 214.5 199 53.8
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.6e-53 213.4 197 54.8
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.6e-53 213.4 184 57.6
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.1e-53 213.0 206 54.4
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 2.1e-53 213.0 197 54.3
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 2.1e-53 213.0 179 57.0
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 2.7e-53 212.6 199 54.8
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 3.5e-53 212.2 199 54.8
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 7.9e-53 211.1 197 55.3
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 5.1e-52 208.4 197 53.3
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 5.1e-52 208.4 197 51.8
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.9e-51 206.5 196 50.5
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 2.5e-51 206.1 197 52.8
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 3.3e-51 205.7 184 56.0
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 3.3e-51 205.7 197 53.3
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 4.3e-51 205.3 163 65.0
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 5.7e-51 204.9 196 52.6
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 7.4e-51 204.5 232 49.1
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.3e-50 203.8 197 53.3
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 1.6e-50 203.4 197 52.8
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 2.8e-50 202.6 197 51.3
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 3.7e-50 202.2 197 50.8
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.1e-49 199.1 184 54.3
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 4.1e-49 198.7 197 50.8
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 1.2e-48 197.2 197 49.7
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 1.0e-47 194.1 145 66.9
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 5.0e-47 191.8 248 45.2
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.5e-46 189.5 200 51.0
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 4.2e-46 188.7 137 69.3
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 7.2e-46 188.0 200 50.5
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 1.6e-45 186.8 139 65.5
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 6.7e-44 181.4 184 48.9
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 4.8e-42 175.3 204 44.6
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 3.1e-41 172.6 197 44.2
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 3.1e-41 172.6 186 51.6
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 6.9e-41 171.4 176 50.0
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 1.0e-39 167.5 192 43.8
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 2.2e-39 166.4 162 52.5
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 2.1e-37 159.8 192 42.2
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 2.3e-36 156.4 110 71.8
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 6.7e-36 154.8 115 72.2
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 6.7e-36 154.8 183 42.1
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 7.0e-33 144.8 151 49.7
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 1.6e-32 143.7 184 44.6
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 3.8e-31 139.0 109 60.6
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 1.5e-30 137.1 156 44.2
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 5.5e-30 135.2 145 47.6
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 2.1e-29 133.3 101 71.3
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.0e-28 131.0 127 51.2
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.0e-27 126.7 151 45.0
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.3e-26 124.0 87 72.4
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 2.2e-26 123.2 126 53.2
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.1e-25 120.9 189 33.3
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 9.1e-25 117.9 105 56.2
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 2.5e-22 109.8 154 36.4
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 1.2e-21 107.5 102 55.9
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 2.8e-18 96.3 190 29.5
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 4.8e-18 95.5 61 72.1
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 4.8e-18 95.5 84 51.2
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 3.5e-16 89.4 84 52.4
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 5.5e-14 82.0 104 42.3
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 2.8e-10 69.7 103 45.6
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 6.3e-10 68.6 49 65.3
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.1e-09 66.2 56 58.9
MD08G1245200 Malus domestica HOM05D006640 ORTHO05D008078 4.1e-09 65.9 36 80.6
Phvul.006G060400 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 5.4e-09 65.5 45 68.9


User provided reference genes

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