Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 0.0e+00 1164.1 591 100.0
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 3.3e-272 941.4 557 84.7
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 3.3e-272 941.4 557 84.9
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 1.7e-268 929.1 557 83.7
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 9.3e-267 923.3 573 83.4
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.5e-261 906.0 548 83.0
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.7e-260 902.5 547 83.2
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 1.9e-259 899.0 572 79.9
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 7.1e-259 897.1 546 82.8
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 2.1e-258 895.6 547 82.3
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.0e-257 893.3 546 82.6
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 3.9e-257 891.3 535 83.4
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.4e-254 882.9 546 82.8
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 4.1e-254 881.3 547 81.7
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 4.5e-253 877.9 546 82.2
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 5.5e-251 870.9 537 81.4
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 1.5e-248 862.8 546 80.0
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.7e-247 858.2 589 76.2
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 6.9e-246 854.0 547 79.7
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 7.2e-243 844.0 549 76.3
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-238 830.1 546 77.7
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-238 830.1 546 77.7
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 2.6e-237 825.5 542 77.7
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 3.0e-233 812.0 547 74.2
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 3.3e-232 808.5 551 74.2
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 5.7e-232 807.7 515 81.6
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 1.7e-231 806.2 551 75.0
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 3.7e-231 805.1 552 73.7
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 6.3e-231 804.3 512 77.7
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 1.4e-230 803.1 535 75.7
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 7.0e-230 800.8 547 74.2
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 1.2e-229 800.0 553 73.1
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 4.5e-229 798.1 553 73.2
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 5.9e-229 797.7 549 75.4
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 7.7e-229 797.3 551 73.3
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 7.7e-229 797.3 509 78.4
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 2.9e-228 795.4 553 72.5
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 8.5e-228 793.9 549 73.6
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 2.7e-226 788.9 548 72.6
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 6.1e-226 787.7 551 73.1
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 3.0e-225 785.4 508 77.0
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.0e-225 785.0 508 77.2
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 5.2e-225 784.6 538 73.0
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 8.8e-225 783.9 508 76.8
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 2.6e-224 782.3 508 76.8
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 3.4e-224 781.9 548 73.0
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 3.4e-224 781.9 562 71.2
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 9.8e-224 780.4 487 79.5
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 9.8e-224 780.4 550 72.2
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 9.8e-224 780.4 562 71.0
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.7e-223 778.5 508 76.4
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 3.7e-223 778.5 548 73.4
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.8e-223 778.1 513 76.2
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 4.8e-223 778.1 548 72.1
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 6.3e-223 777.7 558 70.4
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 8.3e-223 777.3 552 69.9
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.1e-222 775.0 565 72.7
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 3.5e-221 771.9 519 74.0
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 7.7e-221 770.8 555 71.5
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.0e-220 770.4 555 71.5
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 1.0e-220 770.4 537 71.7
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 1.1e-219 766.9 553 70.7
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 1.5e-219 766.5 486 78.0
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.5e-219 766.5 550 70.5
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 1.9e-219 766.1 556 71.2
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 2.1e-218 762.7 504 74.6
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 8.0e-218 760.8 530 72.1
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 8.0e-218 760.8 556 68.5
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 7.5e-216 754.2 529 71.1
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 1.3e-215 753.4 516 72.9
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 4.9e-215 751.5 529 71.5
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 6.3e-215 751.1 547 70.2
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 4.1e-214 748.4 516 73.1
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 7.7e-213 744.2 548 68.6
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 2.9e-212 742.3 557 66.4
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 1.5e-211 740.0 521 70.2
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 2.5e-211 739.2 558 68.5
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 7.2e-211 737.6 561 67.2
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 1.6e-210 736.5 517 70.4
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 3.6e-210 735.3 516 70.7
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 4.0e-209 731.9 521 69.7
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 5.2e-209 731.5 519 70.3
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 5.2e-209 731.5 527 69.6
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.6e-208 729.2 467 74.3
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 4.4e-208 728.4 546 68.5
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 2.2e-207 726.1 541 67.8
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 2.2e-207 726.1 562 66.4
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 2.4e-206 722.6 547 68.4
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 9.2e-206 720.7 516 71.3
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.2e-205 720.3 525 69.3
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 2.0e-205 719.5 547 67.8
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 2.0e-205 719.5 517 71.2
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.0e-204 717.2 545 67.0
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 2.3e-204 716.1 516 71.1
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 3.9e-204 715.3 536 68.3
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 1.9e-203 713.0 527 68.1
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 4.3e-203 711.8 541 67.1
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 2.8e-202 709.1 547 66.4
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 3.6e-202 708.8 525 68.0
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 8.0e-202 707.6 556 66.2
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.8e-201 706.4 557 63.9
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 2.3e-201 706.1 547 66.0
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 5.2e-201 704.9 547 66.0
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 2.6e-200 702.6 522 69.9
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 4.4e-200 701.8 559 63.7
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 2.2e-199 699.5 638 59.2
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 2.9e-199 699.1 546 65.2
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.4e-198 696.8 556 66.2
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 1.9e-198 696.4 531 66.1
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 9.2e-198 694.1 548 65.0
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 1.7e-196 689.9 536 65.9
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 5.0e-196 688.3 517 67.5
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 1.2e-194 683.7 488 69.7
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 8.9e-193 677.6 464 71.1
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 8.3e-191 671.0 536 65.7
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.4e-190 670.2 424 81.8
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 4.6e-189 665.2 526 66.9
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.1e-187 660.6 551 65.7
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 1.1e-187 660.6 545 64.6
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 1.9e-187 659.8 402 78.1
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 2.2e-183 646.4 507 66.1
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 1.2e-181 640.6 529 61.4
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.0e-176 623.2 530 60.8
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 2.6e-176 622.9 548 58.4
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 9.9e-176 620.9 399 73.7
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.1e-166 590.9 355 83.9
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 3.5e-165 585.9 497 60.6
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.4e-161 573.2 520 57.5
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 7.1e-158 561.6 504 58.1
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.8e-154 549.7 529 54.6
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 2.0e-152 543.5 436 64.9
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 4.6e-149 532.3 536 53.7
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.3e-148 530.8 524 57.3
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.7e-143 513.8 375 71.2
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 4.6e-133 479.2 558 47.8
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 4.8e-130 469.2 543 47.5
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 2.2e-127 460.3 377 64.5
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 2.7e-125 453.4 556 46.9
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 2.6e-120 436.8 389 63.0
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 1.4e-100 371.3 499 44.7
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 2.2e-98 364.0 307 56.0
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 7.0e-97 359.0 535 40.2
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 2.5e-86 323.9 412 50.2
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 9.9e-67 258.8 176 77.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 1.1e-60 238.8 312 48.7
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 1.7e-58 231.5 456 32.0
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 3.0e-55 220.7 227 55.1
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 5.3e-52 209.9 169 65.1
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 8.4e-50 202.6 461 31.5
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 3.9e-47 193.7 124 75.8
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 3.9e-47 193.7 402 32.8
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 1.2e-43 182.2 91 92.3
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 3.8e-42 177.2 370 35.9
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 2.1e-40 171.4 106 80.2
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 4.6e-40 170.2 409 30.1
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 2.0e-35 154.8 150 62.0
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 4.2e-33 147.1 206 41.3
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 2.1e-32 144.8 164 57.9
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 3.5e-32 144.1 135 57.8
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 3.4e-27 127.5 84 71.4
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 4.5e-19 100.5 164 37.8
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 2.4e-12 78.2 37 91.9
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 2.0e-11 75.1 36 91.7
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 3.8e-10 70.9 45 68.9
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 8.5e-10 69.7 32 93.8
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 2.7e-08 64.7 33 78.8
Medtr3g040320 Medicago truncatula HOM05D004210 ORTHO05D005017 1.4e-07 62.4 58 56.9
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 1.1e-06 59.3 99 37.4
ClCG02G020800 Citrullus lanatus HOM05D002236 ORTHO05D002341 1.5e-06 58.9 388 22.9
Nitab4.5_0000022g0280 Nicotiana tabacum HOM05D002236 ORTHO05D002341 2.6e-06 58.2 396 22.2
Ah.01g023330 Amaranthus hybridus HOM05D002236 ORTHO05D002341 3.3e-06 57.8 372 20.7
Cpa.g.sc139.59 Carica papaya HOM05D002236 ORTHO05D002341 7.4e-06 56.6 387 20.4
CsaV3_6G021810 Cucumis sativus L. HOM05D002236 ORTHO05D002341 7.4e-06 56.6 394 22.6
QL01p036421 Quercus lobata HOM05D002236 ORTHO05D002341 9.7e-06 56.2 439 22.1


User provided reference genes

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