Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0007421 Lupinus albus HOM05D007266 ORTHO05D005982 5.4e-68 260.8 124 100.0
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 2.3e-42 175.6 122 68.9
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 3.0e-34 148.7 127 60.6
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 1.1e-31 140.2 128 57.0
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 1.1e-31 140.2 128 57.0
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 3.5e-30 135.2 127 55.1
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 5.9e-30 134.4 130 54.6
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 7.7e-30 134.0 126 57.1
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 1.0e-29 133.7 128 55.5
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 3.8e-29 131.7 127 54.3
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 4.2e-28 128.3 128 55.5
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 7.2e-28 127.5 143 49.0
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 4.7e-27 124.8 126 53.2
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 1.0e-26 123.6 142 48.6
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.4e-23 113.2 126 50.0
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 1.4e-23 113.2 128 51.6
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 3.2e-20 102.1 121 45.5
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.6e-19 99.8 126 46.8
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 1.0e-18 97.1 126 40.5
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 2.3e-18 95.9 125 44.8
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 8.8e-18 94.0 126 40.5
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 4.4e-17 91.7 126 39.7
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 9.8e-17 90.5 121 43.8
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 2.2e-16 89.4 128 45.3
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 3.7e-16 88.6 124 35.5
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 4.8e-16 88.2 126 40.5
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 8.3e-16 87.4 126 42.1
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 8.3e-16 87.4 126 42.1
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 4.1e-15 85.1 122 41.0
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.1e-15 85.1 126 42.1
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.1e-15 85.1 127 38.6
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 5.4e-15 84.7 124 39.5
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 5.4e-15 84.7 126 42.1
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.0e-15 84.3 128 43.8
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.2e-14 83.6 126 41.3
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 1.2e-14 83.6 126 40.5
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 2.0e-14 82.8 126 42.1
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 4.5e-14 81.6 122 41.0
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 1.0e-13 80.5 123 39.0
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 1.3e-13 80.1 123 39.0
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 2.2e-13 79.3 126 40.5
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 5.0e-13 78.2 127 41.7
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 5.0e-13 78.2 126 40.5
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 6.5e-13 77.8 125 36.8
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 8.5e-13 77.4 123 34.1
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 1.9e-12 76.3 127 37.0
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.2e-12 75.5 122 38.5
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 4.2e-12 75.1 127 42.5
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 5.5e-12 74.7 127 36.2
Lj3g0005568 Lotus japonicus HOM05D007266 ORTHO05D005982 9.4e-12 73.9 65 63.1
TAR623G0101 Trochodendron aralioides HOM05D007266 ORTHO05D005982 1.8e-10 69.7 134 32.8
Sc11g0006320 Simmondsia chinensis HOM05D007266 ORTHO05D005982 2.3e-10 69.3 126 31.7
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 3.0e-10 68.9 132 34.8
Actinidia01518 Actinidia chinensis HOM05D007266 ORTHO05D005982 4.4e-09 65.1 88 34.1
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 4.4e-09 65.1 123 35.0
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 6.3e-08 61.2 122 35.2
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 1.4e-07 60.1 124 33.1
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 4.1e-07 58.5 126 32.5
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 9.2e-07 57.4 133 31.6
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 2.0e-06 56.2 124 32.3


User provided reference genes

Program Settings