Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 1.8e-204 715.7 365 100.0
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 5.8e-142 508.1 342 77.2
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 7.5e-142 507.7 342 77.2
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 5.4e-140 501.5 338 76.3
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 1.6e-139 500.0 343 74.1
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 1.7e-138 496.5 336 77.4
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 4.3e-137 491.9 338 74.6
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 1.2e-134 483.8 343 72.6
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 6.4e-133 478.0 337 72.7
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.1e-127 460.7 333 72.7
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 1.4e-127 460.3 338 71.6
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 2.2e-125 453.0 338 70.1
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 8.4e-125 451.1 338 69.2
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 1.1e-124 450.7 338 69.2
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.4e-124 450.3 343 68.2
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 1.2e-123 447.2 339 69.9
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.2e-123 447.2 343 69.7
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 2.3e-122 443.0 338 70.1
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 6.6e-122 441.4 338 70.7
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 8.7e-122 441.0 342 68.7
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 8.7e-122 441.0 340 70.0
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 1.1e-121 440.7 343 70.0
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 3.3e-121 439.1 366 64.5
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 7.3e-121 438.0 344 67.2
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 6.2e-120 434.9 337 68.0
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 6.2e-120 434.9 341 69.8
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 1.8e-119 433.3 372 64.0
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 6.9e-119 431.4 338 67.5
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 2.6e-118 429.5 334 67.7
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 3.4e-118 429.1 338 66.6
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 3.4e-118 429.1 330 67.0
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 3.4e-118 429.1 341 67.4
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.2e-117 426.4 341 66.3
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 6.4e-117 424.9 355 67.3
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 1.9e-116 423.3 337 67.4
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 2.7e-115 419.5 338 65.1
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 6.0e-115 418.3 340 65.0
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 7.9e-115 417.9 340 65.6
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.0e-114 417.5 310 68.7
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.3e-114 417.2 374 64.4
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-114 416.8 334 66.2
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 1.7e-114 416.8 338 65.1
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 1.9e-113 413.3 339 64.0
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.5e-113 412.9 345 63.5
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 7.3e-113 411.4 343 64.1
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 1.3e-112 410.6 345 63.2
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 2.1e-112 409.8 345 64.3
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 2.1e-112 409.8 345 64.3
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 2.1e-112 409.8 354 61.6
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 4.8e-112 408.7 345 63.8
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 6.2e-112 408.3 345 63.5
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 6.2e-112 408.3 349 62.5
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 8.1e-112 407.9 339 62.5
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 1.8e-111 406.8 343 62.7
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 3.1e-111 406.0 344 63.4
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 4.0e-111 405.6 339 66.1
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 6.9e-111 404.8 348 62.1
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 9.0e-111 404.4 305 68.9
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 9.0e-111 404.4 301 69.4
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.0e-110 403.3 343 63.3
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 2.0e-110 403.3 342 63.2
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.6e-110 402.9 344 63.4
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 3.4e-110 402.5 338 64.8
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 3.4e-110 402.5 340 63.2
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 4.5e-110 402.1 342 63.5
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 4.5e-110 402.1 348 61.8
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 5.8e-110 401.7 349 61.9
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 2.2e-109 399.8 339 62.2
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.4e-108 397.1 305 65.2
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.9e-108 396.7 331 63.7
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 2.4e-108 396.4 329 63.2
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 2.4e-108 396.4 313 65.8
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 1.0e-106 391.0 332 63.9
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 2.3e-106 389.8 347 61.4
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 3.9e-106 389.0 347 62.8
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 6.7e-106 388.3 332 63.3
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 4.8e-104 382.1 332 62.3
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.4e-103 380.6 332 62.0
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 2.9e-101 372.9 311 67.2
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 5.5e-100 368.6 342 60.2
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.6e-99 367.1 352 59.9
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 4.6e-99 365.5 352 58.2
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 8.2e-96 354.8 322 60.9
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.1e-95 352.4 344 59.6
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 5.5e-92 342.0 274 67.9
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 1.8e-90 337.0 272 64.0
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 6.3e-88 328.6 258 69.0
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 1.4e-87 327.4 344 54.1
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 9.0e-87 324.7 329 55.9
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 1.2e-86 324.3 348 54.9
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 5.5e-84 315.5 281 61.2
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 7.2e-84 315.1 333 53.5
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.0e-82 311.2 282 59.9
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 1.4e-82 310.8 407 46.2
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 4.8e-80 302.4 226 69.5
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 8.2e-80 301.6 229 69.4
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 9.1e-79 298.1 380 48.4
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 1.1e-76 291.2 242 63.2
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 6.1e-75 285.4 315 48.6
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 9.7e-73 278.1 229 62.9
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 3.6e-67 259.6 321 46.1
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 6.1e-67 258.8 176 71.6
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 3.0e-66 256.5 331 45.9
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 4.5e-62 242.7 258 52.3
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 2.2e-61 240.4 268 47.4
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 1.7e-53 214.2 188 60.6
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 2.9e-53 213.4 327 39.8
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 9.4e-52 208.4 204 57.4
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 5.2e-50 202.6 257 47.5
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 1.5e-33 147.9 96 77.1
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.1e-26 125.2 82 70.7
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 1.8e-26 124.4 74 79.7
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 1.2e-25 121.7 116 56.0
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 6.4e-24 115.9 273 31.5
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 1.1e-20 105.1 91 60.4
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 1.1e-20 105.1 258 33.3
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.5e-20 104.0 60 81.7
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 2.8e-19 100.5 91 58.2
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 1.2e-14 85.1 73 61.6
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 2.1e-14 84.3 307 28.0
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 2.6e-09 67.4 39 82.1
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 1.4e-07 61.6 55 58.2
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 1.4e-07 61.6 55 58.2
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 1.4e-07 61.6 173 31.8
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 1.6e-06 58.2 149 28.9
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 3.5e-06 57.0 220 27.3
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 7.8e-06 55.8 192 28.1
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 7.8e-06 55.8 192 28.1


User provided reference genes

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