Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 4.3e-49 197.6 94 100.0
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 9.3e-44 179.9 90 91.1
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 4.6e-43 177.6 92 88.0
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 1.7e-42 175.6 92 88.0
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 2.3e-42 175.3 92 88.0
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 3.0e-42 174.9 92 85.9
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 3.0e-42 174.9 92 89.1
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 1.1e-41 172.9 92 85.9
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 6.2e-40 167.2 92 82.6
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 4.9e-37 157.5 92 79.3
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 4.9e-37 157.5 92 79.3
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 4.9e-37 157.5 90 83.3
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 6.4e-37 157.1 90 83.3
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 1.4e-36 156.0 92 78.3
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.9e-36 155.6 92 78.3
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 7.1e-36 153.7 92 77.2
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 9.3e-36 153.3 90 80.0
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 1.6e-35 152.5 90 81.1
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 2.7e-35 151.8 92 77.2
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 2.7e-35 151.8 92 77.2
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 4.6e-35 151.0 90 78.9
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 6.0e-35 150.6 92 78.3
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 6.0e-35 150.6 90 77.8
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 7.9e-35 150.2 90 81.1
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 7.9e-35 150.2 92 78.3
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 1.0e-34 149.8 92 73.9
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 1.0e-34 149.8 90 81.1
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 1.0e-34 149.8 92 78.3
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 1.3e-34 149.4 92 77.2
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 1.8e-34 149.1 94 76.6
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.3e-34 148.7 93 74.2
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.3e-34 148.7 90 77.8
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 2.3e-34 148.7 90 77.8
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 3.0e-34 148.3 90 76.7
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.0e-34 148.3 92 77.2
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 3.0e-34 148.3 92 75.0
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 3.9e-34 147.9 92 76.1
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 6.7e-34 147.1 90 76.7
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 6.7e-34 147.1 90 76.7
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 8.7e-34 146.7 88 79.5
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 8.7e-34 146.7 88 79.5
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 8.7e-34 146.7 90 75.6
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 1.1e-33 146.4 91 75.8
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 1.1e-33 146.4 90 77.8
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 1.5e-33 146.0 92 73.9
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 1.5e-33 146.0 96 71.9
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 1.5e-33 146.0 96 71.9
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 1.5e-33 146.0 96 71.9
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 1.5e-33 146.0 90 77.8
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 1.9e-33 145.6 90 78.9
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 2.5e-33 145.2 89 79.8
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 2.5e-33 145.2 90 76.7
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 2.5e-33 145.2 91 74.7
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 3.3e-33 144.8 89 76.4
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 3.3e-33 144.8 90 73.3
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 5.6e-33 144.1 92 75.0
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 7.4e-33 143.7 89 76.4
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 7.4e-33 143.7 90 77.8
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 9.6e-33 143.3 93 73.1
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 9.6e-33 143.3 93 72.0
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 9.6e-33 143.3 90 78.9
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 9.6e-33 143.3 89 75.3
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 1.6e-32 142.5 90 76.7
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 2.1e-32 142.1 92 72.8
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 2.8e-32 141.7 90 75.6
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 2.8e-32 141.7 116 62.9
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 3.7e-32 141.4 91 74.7
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 6.2e-32 140.6 89 73.0
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 6.2e-32 140.6 90 75.6
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 8.1e-32 140.2 92 69.6
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 1.1e-31 139.8 90 75.6
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 1.1e-31 139.8 88 77.3
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 1.4e-31 139.4 106 65.1
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 2.4e-31 138.7 91 68.1
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 2.4e-31 138.7 90 71.1
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.1e-31 138.3 92 72.8
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 4.0e-31 137.9 90 71.1
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 5.3e-31 137.5 89 75.3
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 5.3e-31 137.5 89 75.3
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 6.9e-31 137.1 90 72.2
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 1.2e-30 136.3 94 67.0
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 2.0e-30 135.6 89 75.3
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 3.4e-30 134.8 90 73.3
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 4.5e-30 134.4 90 72.2
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 4.5e-30 134.4 90 71.1
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 5.8e-30 134.0 91 71.4
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 9.9e-30 133.3 92 70.7
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 1.3e-29 132.9 91 68.1
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 1.3e-29 132.9 88 68.2
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 1.7e-29 132.5 91 65.9
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 3.8e-29 131.3 73 83.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 4.9e-29 131.0 93 69.9
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 1.4e-28 129.4 91 67.0
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.6e-27 125.9 76 77.6
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 7.9e-27 123.6 100 63.0
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 8.7e-26 120.2 88 64.8
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 4.3e-25 117.9 90 63.3
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 9.6e-25 116.7 91 59.3
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 9.6e-25 116.7 88 63.6
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 2.1e-24 115.5 73 74.0
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.1e-23 113.2 88 62.5
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 4.9e-21 104.4 90 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 3.9e-18 94.7 91 53.8
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 3.9e-18 94.7 73 63.0
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.5e-12 75.5 85 49.4
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 3.6e-11 71.6 43 79.1
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 1.0e-10 70.1 42 78.6
Hund03009 Selenicereus undatus HOM05D004398 ORTHO05D005268 1.5e-06 56.2 74 37.8
Hund25700 Selenicereus undatus HOM05D004398 ORTHO05D005268 7.7e-06 53.9 67 38.8


User provided reference genes

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