Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 5.4e-132 474.6 278 100.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.0e-65 253.4 290 62.8
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 7.7e-62 241.5 280 59.3
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 8.5e-61 238.0 281 59.4
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 2.7e-59 233.0 277 58.8
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 2.3e-58 229.9 291 59.1
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 3.1e-55 219.5 284 53.9
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.2e-52 209.1 282 54.3
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 7.2e-52 208.4 281 53.0
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.0e-50 204.5 172 72.1
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.0e-50 204.5 284 50.4
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 4.7e-43 179.1 261 51.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 3.0e-42 176.4 285 49.5
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 6.8e-42 175.3 220 50.5
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 2.0e-41 173.7 130 70.8
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 3.7e-40 169.5 153 61.4
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 3.7e-40 169.5 297 49.8
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 6.3e-40 168.7 276 44.9
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 3.1e-39 166.4 279 46.6
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.1e-39 166.0 254 46.9
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 4.1e-39 166.0 264 44.7
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 4.1e-39 166.0 255 49.0
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.0e-39 165.2 133 66.9
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.2e-38 164.5 255 45.1
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.0e-38 163.7 160 59.4
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.5e-38 162.5 255 46.7
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 4.5e-38 162.5 281 46.3
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 7.7e-38 161.8 284 46.1
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.0e-37 161.4 249 48.6
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.0e-37 161.4 280 46.4
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.3e-37 161.0 166 57.2
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-37 161.0 166 57.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.3e-37 161.0 283 43.5
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.3e-37 161.0 151 58.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 2.2e-37 160.2 257 48.6
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 2.9e-37 159.8 293 46.1
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 5.0e-37 159.1 149 60.4
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 6.5e-37 158.7 200 51.0
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 8.5e-37 158.3 136 65.4
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 8.5e-37 158.3 165 55.2
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.5e-37 158.3 165 55.2
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 8.5e-37 158.3 161 58.4
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.1e-36 157.9 275 44.4
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.1e-36 157.9 160 59.4
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.5e-36 157.5 149 61.1
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.9e-36 157.1 141 59.6
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.9e-36 157.1 267 46.8
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 1.9e-36 157.1 157 59.9
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 2.5e-36 156.8 234 47.4
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.5e-36 156.8 107 73.8
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.5e-36 156.8 275 45.8
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 3.2e-36 156.4 236 44.1
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 4.2e-36 156.0 145 60.0
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 5.5e-36 155.6 269 44.2
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 5.5e-36 155.6 136 63.2
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 7.2e-36 155.2 270 47.0
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.2e-36 155.2 165 54.5
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 9.4e-36 154.8 274 46.4
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.7e-35 153.3 146 58.2
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 3.6e-35 152.9 239 46.0
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 6.1e-35 152.1 327 44.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 6.1e-35 152.1 112 70.5
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 8.0e-35 151.8 291 44.3
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.0e-34 151.4 244 46.7
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.4e-34 151.0 272 43.8
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.4e-34 151.0 233 45.9
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 2.3e-34 150.2 99 75.8
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 2.3e-34 150.2 278 46.4
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.3e-34 150.2 242 45.0
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.3e-34 150.2 261 43.7
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 3.0e-34 149.8 269 45.7
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 4.0e-34 149.4 258 42.6
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 8.8e-34 148.3 172 51.7
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.5e-33 147.5 233 44.6
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.0e-33 147.1 268 47.8
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.6e-33 146.7 258 43.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 3.4e-33 146.4 268 46.3
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 3.4e-33 146.4 268 46.3
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 3.4e-33 146.4 117 65.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 4.4e-33 146.0 271 46.1
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.7e-33 145.6 171 50.3
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 5.7e-33 145.6 267 46.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 9.8e-33 144.8 245 43.7
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.3e-32 144.4 147 55.8
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.7e-32 144.1 100 70.0
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 2.8e-32 143.3 271 46.1
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.4e-31 141.0 282 44.0
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.4e-31 141.0 279 43.7
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.1e-31 138.3 239 41.8
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.6e-30 137.5 251 42.6
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 3.5e-30 136.3 208 45.2
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 4.5e-30 136.0 209 46.9
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.5e-30 136.0 298 40.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 3.8e-29 132.9 251 43.0
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 5.0e-29 132.5 242 44.2
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 5.0e-29 132.5 242 44.2
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 5.0e-29 132.5 271 39.1
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 6.6e-29 132.1 209 46.4
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 6.6e-29 132.1 209 46.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.5e-28 131.0 133 52.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.0e-26 123.2 242 42.1
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.2e-25 121.3 254 42.9
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 2.9e-21 106.7 115 52.2
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.2e-19 101.3 96 49.0
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.1e-19 100.5 222 41.0
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 5.2e-18 95.9 55 87.3
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.4e-15 87.0 79 58.2
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 2.4e-15 87.0 78 59.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.2e-15 85.1 63 65.1
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 9.2e-15 85.1 63 65.1
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.6e-14 84.3 77 58.4
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.8e-14 82.0 58 67.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.3e-13 81.3 83 57.8
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.0e-13 80.1 100 42.0
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 3.0e-13 80.1 125 37.6
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 6.6e-13 79.0 238 31.1
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 5.6e-12 75.9 203 42.9
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 5.2e-10 69.3 48 70.8
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 5.2e-10 69.3 75 52.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.2e-09 68.2 58 60.3
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.6e-06 57.8 122 33.6
Nn3g17015 Nelumbo nucifera HOM05D000793 ORTHO05D000783 4.6e-06 56.2 120 30.0


User provided reference genes

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