Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.0e-110 401.7 191 100.0
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.0e-110 401.7 191 100.0
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.0e-110 401.7 191 100.0
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-107 393.3 191 98.4
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-107 393.3 191 98.4
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 2.0e-106 389.0 191 97.4
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 2.0e-106 389.0 191 97.4
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 2.0e-106 389.0 191 97.4
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 4.6e-106 387.9 191 96.9
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.6e-106 387.9 191 96.9
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.9e-106 387.5 191 96.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 7.8e-106 387.1 191 96.9
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.0e-105 386.7 191 96.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.3e-105 386.3 191 96.3
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.7e-105 386.0 191 96.3
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.3e-105 385.6 191 96.3
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 5.0e-105 384.4 191 95.8
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 7.3e-104 380.6 191 95.8
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.8
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.6e-103 379.4 191 95.8
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 3.6e-103 378.3 191 95.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 8.0e-103 377.1 191 94.2
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.2e-101 373.2 191 94.2
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.2e-101 373.2 191 94.2
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-101 372.5 189 94.7
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.6e-101 372.1 184 96.2
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.4e-101 371.3 188 93.6
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 2.2e-100 369.0 191 93.7
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.9e-100 368.6 188 92.6
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 8.3e-100 367.1 191 93.2
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.4e-99 365.5 191 91.6
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.0e-98 360.9 188 92.0
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.3e-97 359.8 191 91.1
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 2.1e-95 352.4 189 91.0
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.8e-95 352.1 179 93.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.1e-94 350.1 186 89.8
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.1e-94 350.1 186 89.8
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.0e-94 348.2 170 98.2
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 4.0e-94 348.2 170 98.2
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 8.9e-94 347.1 170 98.2
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 8.9e-94 347.1 188 87.2
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 7.5e-93 344.0 170 97.1
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.9e-92 341.3 170 97.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 6.4e-92 340.9 170 97.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 2.4e-91 339.0 170 95.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 5.4e-91 337.8 167 97.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.0e-89 333.6 170 95.3
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-89 333.2 168 95.8
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-89 332.8 170 95.3
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.7e-89 332.8 170 95.3
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.3e-89 332.4 166 96.4
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 8.6e-89 330.5 168 95.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.9e-88 329.3 170 94.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 2.1e-87 325.9 191 84.8
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 6.2e-87 324.3 165 94.5
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-86 323.2 170 91.8
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.2e-85 320.1 185 83.8
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-85 319.3 177 88.1
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 6.4e-84 314.3 161 92.5
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-84 314.3 163 92.6
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 8.4e-84 313.9 170 90.6
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.2e-83 312.0 166 91.0
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-81 305.4 179 83.8
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 8.6e-81 303.9 168 86.9
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-79 298.5 191 77.0
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-79 298.1 177 81.9
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 5.2e-78 294.7 170 85.3
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-78 293.9 165 86.1
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-77 293.1 175 83.4
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-77 292.4 164 86.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-76 289.7 164 86.6
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.8e-76 288.5 141 97.9
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.8e-76 288.5 141 97.9
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 3.2e-75 285.4 146 94.5
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 4.2e-75 285.0 153 91.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-73 278.9 188 71.8
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-71 271.6 138 94.9
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.4e-70 270.0 135 95.6
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-69 264.2 135 93.3
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-67 258.1 138 90.6
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-67 258.1 138 90.6
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-66 254.6 142 86.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-66 254.2 132 91.7
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 8.7e-65 250.8 170 77.6
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-65 250.8 155 80.6
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-64 248.8 148 82.4
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-64 247.3 131 90.1
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 8.1e-63 244.2 124 94.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-61 237.7 136 86.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 4.9e-60 235.0 191 66.0
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.6e-58 229.9 191 65.4
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 2.7e-58 229.2 136 83.8
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-57 225.3 138 83.3
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-56 221.5 127 85.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 8.1e-55 217.6 114 92.1
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-54 216.9 134 82.1
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-54 216.1 114 90.4
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 2.6e-53 212.6 100 99.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.7e-52 209.9 99 99.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 3.8e-52 208.8 109 91.7
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.4e-52 207.6 148 72.3
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 8.4e-52 207.6 185 61.6
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.1e-51 207.2 97 99.0
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.9e-51 206.5 96 100.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.9e-51 206.5 99 98.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.0e-50 201.4 138 74.6
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.9e-49 198.7 102 93.1
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 1.5e-48 196.8 109 89.0
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.5e-48 196.8 154 59.7
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-48 196.4 115 85.2
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 2.4e-46 189.5 182 50.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 9.0e-46 187.6 100 89.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.6e-45 186.0 99 88.9
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-43 180.6 103 85.4
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-43 178.7 94 89.4
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 6.1e-42 174.9 79 100.0
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 7.9e-42 174.5 96 86.5
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-40 170.6 143 62.9
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 2.5e-40 169.5 89 91.0
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.3e-40 168.7 106 79.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 6.9e-38 161.4 136 64.0
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-37 159.1 87 85.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-37 159.1 87 85.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.0e-36 157.5 74 98.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.0e-36 157.5 74 98.6
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-36 157.5 132 62.9
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 6.5e-36 154.8 74 97.3
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 8.5e-36 154.5 74 94.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-36 154.5 171 51.5
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.6e-34 149.1 71 95.8
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.6e-34 149.1 150 56.7
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-33 147.5 81 85.2
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.0e-33 147.5 175 45.1
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.7e-33 144.8 72 93.1
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 1.1e-32 144.1 86 80.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-32 142.1 74 89.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 9.7e-32 141.0 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-31 139.8 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-31 139.4 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-31 139.0 74 87.8
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.2e-31 137.9 74 86.5
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 2.4e-30 136.3 68 91.2
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-30 136.3 72 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-30 135.2 74 86.5
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-30 134.4 135 58.5
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-30 134.4 135 58.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-29 133.3 72 86.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-28 131.0 74 85.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 1.0e-28 131.0 92 71.7
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-28 129.8 74 85.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-28 128.3 71 85.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-27 125.6 74 82.4
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 2.6e-24 116.3 57 94.7
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.4e-24 114.8 64 84.4
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.8e-23 112.8 69 81.2
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 5.3e-22 108.6 59 91.5
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.6e-21 106.3 61 88.5
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 2.5e-19 99.8 51 92.2
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.5e-19 99.8 72 69.4
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-17 92.8 69 68.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-17 92.0 58 77.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-16 89.0 111 48.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 9.7e-16 87.8 44 93.2
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.5e-13 79.3 45 80.0
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-12 77.0 181 33.7
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-11 73.6 50 72.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.3e-09 66.6 35 85.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 6.8e-09 65.1 30 96.7
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 8.8e-09 64.7 30 93.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-08 61.2 34 82.4
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-07 58.5 33 84.8
Medtr8g059730 Medicago truncatula HOM05D001560 ORTHO05D004675 8.3e-07 58.2 43 60.5


User provided reference genes

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