Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0406031 Lupinus albus HOM05D003517 ORTHO05D009794 1.7e-106 389.4 206 100.0
Lalb_Chr00c39g0409031 Lupinus albus HOM05D003517 ORTHO05D009794 1.7e-106 389.4 206 100.0
Lalb_Chr00c39g0409211 Lupinus albus HOM05D003517 ORTHO05D009794 1.7e-106 389.4 206 100.0
Lalb_Chr00c51g0413121 Lupinus albus HOM05D003517 ORTHO05D009794 1.7e-106 389.4 206 100.0
Lj5g0026865 Lotus japonicus HOM05D003517 ORTHO05D009794 6.0e-104 380.9 204 98.0
LjContig00439g0001390 Lotus japonicus HOM05D003517 ORTHO05D009794 6.0e-104 380.9 204 98.0
LjContig00446g0016600 Lotus japonicus HOM05D003517 ORTHO05D009794 6.0e-104 380.9 204 98.0
CANSAT16G0040 Cannabis sativa HOM05D003517 ORTHO05D009794 1.7e-103 379.4 206 96.6
ATMG00270 Arabidopsis thaliana HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
BolSC28t60338H Brassica oleracea HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
BolSC28t60397H Brassica oleracea HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
BraSC77t46643Z Brassica rapa HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
CARHR282730 Cardamine hirsuta HOM05D003517 ORTHO05D009794 2.5e-102 375.6 206 96.1
RcHm_v2.0_MTg0498991 Rosa chinensis HOM05D003517 ORTHO05D009794 3.3e-102 375.2 206 96.1
Glyma.08G301000 Glycine max HOM05D003517 ORTHO05D009794 8.1e-101 370.5 200 97.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 3.1e-100 368.6 200 97.0
Aqoxy38s018 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 2.6e-99 365.5 206 94.2
Nn003s41395 Nelumbo nucifera HOM05D003517 ORTHO05D009794 4.5e-99 364.8 203 95.1
Nn1g09965 Nelumbo nucifera HOM05D003517 ORTHO05D009794 4.5e-99 364.8 203 95.1
Nn1g10124 Nelumbo nucifera HOM05D003517 ORTHO05D009794 4.5e-99 364.8 203 95.1
Lj2P1233T102 Lonicera japonica HOM05D003517 ORTHO05D009794 9.9e-99 363.6 206 93.7
Lj2P1236T75 Lonicera japonica HOM05D003517 ORTHO05D009794 9.9e-99 363.6 206 93.7
SHI35306 Sapria himalayana HOM05D003517 ORTHO05D009794 1.3e-98 363.2 207 92.8
SHI49089 Sapria himalayana HOM05D003517 ORTHO05D009794 1.3e-98 363.2 207 92.8
Sed0011263 Sechium edule HOM05D003517 ORTHO05D009794 1.7e-98 362.8 202 94.6
Sed0015872 Sechium edule HOM05D003517 ORTHO05D009794 1.7e-98 362.8 202 94.6
Gohir.A03G108600 Gossypium hirsutum HOM05D003517 ORTHO05D009794 2.9e-98 362.1 205 94.6
SHI53309 Sapria himalayana HOM05D003517 ORTHO05D009794 3.8e-98 361.7 207 92.3
Gorai.001G168000 Gossypium raimondii HOM05D003517 ORTHO05D009794 2.4e-97 359.0 205 94.1
Sp3g25610 Schrenkiella parvula HOM05D003517 ORTHO05D009794 5.4e-97 357.8 198 95.5
Peaxi162Scf00456g00029 Petunia axillaris HOM05D003517 ORTHO05D009794 7.1e-97 357.5 203 93.1
Solyc00g021630.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 7.1e-97 357.5 203 93.1
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.0e-95 353.6 203 92.1
DCAR_032460 Daucus carota HOM05D003517 ORTHO05D009794 1.5e-94 349.7 204 91.7
HanXRQChr00c0234g0572741 Helianthus annuus HOM05D003517 ORTHO05D009794 7.4e-94 347.4 202 92.1
HanXRQMTg0579471 Helianthus annuus HOM05D003517 ORTHO05D009794 7.4e-94 347.4 202 92.1
MBI05_g05356_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009794 5.5e-89 331.3 195 90.3
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.1e-88 329.3 203 85.7
CSS0025973 Camellia sinensis var. sinensis HOM05D003517 ORTHO05D009794 2.7e-88 328.9 183 94.5
CAN.G1.11 Capsicum annuum HOM05D003517 ORTHO05D009794 6.0e-88 327.8 203 85.7
Nitab4.5_0000172g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.3e-87 325.9 203 84.2
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-84 317.0 203 83.3
LjContig00315g0004708 Lotus japonicus HOM05D003517 ORTHO05D009794 3.1e-84 315.5 181 93.9
HanXRQChr02g0049481 Helianthus annuus HOM05D003517 ORTHO05D009794 2.0e-83 312.8 187 89.3
Gohir.A08G086024 Gossypium hirsutum HOM05D003517 ORTHO05D009794 2.6e-83 312.4 204 82.8
HanXRQChr01g0013411 Helianthus annuus HOM05D003517 ORTHO05D009794 3.8e-82 308.5 176 93.2
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea HOM05D003517 ORTHO05D009794 1.9e-81 306.2 200 84.5
SabraMtG0003300 Salix brachista HOM05D003517 ORTHO05D009794 4.8e-77 291.6 157 94.9
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.4e-76 289.3 203 79.8
Nitab4.5_0000172g0410 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.3e-70 268.9 203 75.9
CDE02G3221 Ceratophyllum demersum HOM05D003517 ORTHO05D009794 4.8e-69 265.0 150 92.7
unitig_0.g2040 Utricularia gibba HOM05D003517 ORTHO05D009794 1.3e-66 256.9 154 88.3
Nitab4.5_0003945g0090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.0e-66 255.0 174 81.0
HanXRQChr09g0237761 Helianthus annuus HOM05D003517 ORTHO05D009794 2.7e-64 249.2 140 92.9
CsaV3_UNG208670 Cucumis sativus L. HOM05D003517 ORTHO05D009794 9.1e-60 234.2 130 93.8
TPR.G40594 Trifolium pratense HOM05D003517 ORTHO05D009794 5.9e-59 231.5 124 97.6
RhsimMtG0007100 Rhododendron simsii HOM05D003517 ORTHO05D009794 1.7e-58 229.9 130 93.8
Nitab4.5_0001152g0960 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.9e-57 226.5 149 79.9
HanXRQChr05g0138851 Helianthus annuus HOM05D003517 ORTHO05D009794 5.9e-51 204.9 118 90.7
Pp3c12_12240 Physcomitrium patens HOM05D003517 ORTHO05D009794 2.2e-50 203.0 193 62.2
Sp5g20260 Schrenkiella parvula HOM05D003517 ORTHO05D009794 4.2e-49 198.7 197 63.5
BraSC159t45725Z Brassica rapa HOM05D003517 ORTHO05D009794 3.3e-46 189.1 103 97.1
Aa31csc798G10 Aethionema arabicum HOM05D003517 ORTHO05D009794 2.2e-42 176.4 115 83.5
Lj2P92T86 Lonicera japonica HOM05D003517 ORTHO05D009794 1.5e-41 173.7 100 89.0
Ca_03783_v3 Cicer arietinum L. HOM05D009973 ORTHO05D009794 4.4e-38 162.2 89 97.8
VMungo0985G0003 Vigna mungo HOM05D003517 ORTHO05D009794 5.7e-38 161.8 88 98.9
Actinidia34878 Actinidia chinensis HOM05D003517 ORTHO05D009794 3.1e-36 156.0 95 91.6
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.1e-36 156.0 184 57.6
Thhalv10029192m.g Eutrema salsugineum HOM05D003517 ORTHO05D009794 6.5e-34 148.3 84 91.7
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.1e-28 129.4 175 52.6
TPR.G39738 Trifolium pratense HOM05D003517 ORTHO05D009794 1.6e-27 127.1 69 95.7
CiPaw.05G081600 Carya illinoinensis HOM05D003517 ORTHO05D009794 1.5e-25 120.6 93 72.0
Solyc10g045730.1 Solanum lycopersicum HOM05D003517 ORTHO05D009794 2.3e-23 113.2 131 57.3
Lsat_1_v5_gn_5_95761 Lactuca sativa HOM05D002069 ORTHO05D009794 3.7e-21 105.9 57 86.0
Nitab4.5_0001152g0550 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.2e-20 102.8 64 76.6
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.6e-19 100.5 61 83.6
Aqoxy12s041 Aquilegia oxysepala HOM05D003517 ORTHO05D009794 2.7e-19 99.8 71 84.5
HanXRQChr05g0138841 Helianthus annuus HOM05D003517 ORTHO05D009794 1.2e-16 90.9 57 87.7
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.3e-15 86.7 63 77.8
SGA_v2.0_scaffold400G50848 Striga asiatica HOM05D003517 ORTHO05D009794 4.0e-15 85.9 49 89.8
Psat0s1454g0040 Pisum sativum HOM05D003517 ORTHO05D009794 2.6e-14 83.2 89 61.8
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 6.4e-13 78.6 44 93.2
HanXRQChr05g0138831 Helianthus annuus HOM05D003517 ORTHO05D009794 6.0e-11 72.0 37 94.6
HanXRQChr05g0138811 Helianthus annuus HOM05D003517 ORTHO05D009794 5.0e-10 68.9 37 91.9
HanXRQChr05g0138821 Helianthus annuus HOM05D003517 ORTHO05D009794 5.0e-10 68.9 37 91.9
Lj2C1230G62 Lonicera japonica HOM05D014754 ORTHO05D009794 2.1e-08 63.5 40 85.0
AT2G07718 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 1.1e-07 61.2 34 94.1
ATMG00590 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 1.1e-07 61.2 34 94.1
CARHR282960 Cardamine hirsuta HOM05D014754 ORTHO05D017434 1.1e-07 61.2 34 94.1


User provided reference genes

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