Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 2.9e-47 191.4 89 100.0
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 2.9e-47 191.4 89 100.0
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 2.9e-47 191.4 89 100.0
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 2.9e-47 191.4 89 100.0
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 1.2e-45 186.0 89 97.8
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 6.1e-45 183.7 90 97.8
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 1.4e-44 182.6 89 95.5
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 2.3e-44 181.8 89 95.5
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 5.3e-41 170.6 88 92.0
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 4.5e-40 167.5 90 91.1
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 4.5e-40 167.5 90 91.1
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 3.8e-39 164.5 82 93.9
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 2.5e-38 161.8 88 87.5
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 9.4e-38 159.8 78 96.2
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 8.8e-36 153.3 85 85.9
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.7e-31 139.0 81 84.0
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 2.2e-31 138.7 76 84.2
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 2.9e-31 138.3 68 95.6
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 1.5e-30 136.0 66 97.0
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 9.4e-30 133.3 69 91.3
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 2.7e-24 115.2 58 93.1
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 2.2e-23 112.1 62 90.3
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 5.5e-22 107.5 90 67.8
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.6e-21 105.9 59 86.4
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.6e-21 105.9 59 86.4
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 2.7e-21 105.1 58 89.7
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 4.7e-21 104.4 79 67.1
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-21 104.0 55 90.9
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 8.0e-21 103.6 79 65.8
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 2.0e-19 99.0 57 84.2
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 3.4e-19 98.2 89 62.9
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-19 97.8 55 83.6
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 2.8e-18 95.1 57 82.5
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-18 95.1 78 67.9
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-18 95.1 59 78.0
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-18 95.1 59 78.0
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-18 94.7 48 93.8
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 4.8e-18 94.4 56 82.1
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 4.8e-18 94.4 51 86.3
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 6.3e-18 94.0 56 82.1
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-17 92.0 52 86.5
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.1e-17 91.3 49 87.8
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 4.1e-17 91.3 51 86.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-16 89.7 54 83.3
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-16 89.7 52 84.6
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 4.5e-16 87.8 53 81.1
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 1.7e-15 85.9 50 84.0
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-15 85.1 46 89.1
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-15 84.7 50 80.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 3.8e-15 84.7 55 80.0
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-15 84.3 50 84.0
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-14 83.2 46 87.0
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-14 83.2 46 87.0
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-14 82.8 52 84.6
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 47 85.1
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 47 80.9
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 2.5e-14 82.0 50 80.0
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-14 81.6 48 83.3
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-14 81.6 46 87.0
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-14 80.9 50 82.0
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 7.2e-14 80.5 46 78.3
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-14 80.5 43 88.4
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.2e-13 79.7 50 80.0
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-13 79.7 46 82.6
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 2.8e-13 78.6 39 94.9
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 3.6e-13 78.2 36 94.4
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-13 78.2 43 86.0
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 6.1e-13 77.4 63 66.7
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-13 77.4 46 82.6
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 8.0e-13 77.0 50 76.0
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 1.0e-12 76.6 45 86.7
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 1.0e-12 76.6 45 86.7
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.4e-12 76.3 52 71.2
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 5.2e-12 74.3 50 78.0
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 5.2e-12 74.3 43 81.4
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-11 71.2 42 83.3
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 1.3e-10 69.7 37 83.8
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 1.3e-10 69.7 37 83.8
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-10 69.7 45 77.8
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-10 68.6 51 68.6
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 3.7e-10 68.2 43 76.7
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.9e-10 67.8 29 100.0
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 8.3e-10 67.0 38 86.8
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 7.0e-09 63.9 38 81.6
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 9.2e-09 63.5 39 82.1
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 2.0e-08 62.4 36 80.6
SHI31533 Sapria himalayana HOM05D000743 ORTHO05D000580 2.0e-08 62.4 42 73.8
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-08 62.4 37 83.8
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 1.3e-07 59.7 37 81.1
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 3.9e-07 58.2 37 81.1
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 5.0e-07 57.8 37 81.1
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 3.3e-06 55.1 37 73.0


User provided reference genes

Program Settings