Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 8.2e-140 500.4 250 100.0
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 8.2e-140 500.4 250 100.0
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 6.5e-129 464.2 236 97.9
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 4.4e-125 451.4 243 94.7
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 4.4e-125 451.4 248 92.7
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 8.3e-124 447.2 243 93.0
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.6e-122 443.0 243 92.2
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.6e-122 443.0 243 92.2
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.6e-122 443.0 243 92.2
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 2.0e-122 442.6 243 93.0
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 3.3e-120 435.3 243 90.1
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 5.6e-120 434.5 243 90.5
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 5.6e-120 434.5 243 90.5
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 5.6e-120 434.5 244 89.8
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 5.6e-120 434.5 244 89.8
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 5.6e-120 434.5 244 89.8
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 5.6e-120 434.5 244 89.8
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 5.6e-120 434.5 244 89.8
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 1.6e-119 433.0 243 89.7
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 5.4e-115 417.9 234 91.9
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 5.4e-115 417.9 234 91.9
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 1.0e-110 403.7 223 91.9
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 1.1e-99 367.1 197 92.4
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.6e-98 363.2 231 83.1
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 8.6e-89 330.9 231 77.5
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 1.4e-86 323.6 180 91.7
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 7.6e-85 317.8 235 68.9
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 6.4e-84 314.7 235 68.9
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 2.4e-83 312.8 235 68.5
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 9.9e-77 290.8 194 78.4
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 1.8e-73 280.0 234 69.7
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 3.3e-72 275.8 149 94.6
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 9.9e-69 264.2 215 68.4
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 5.3e-62 241.9 149 83.2
Nitab4.5_0009703g0110 Nicotiana tabacum HOM05D007877 ORTHO05D009957 1.9e-56 223.4 181 70.2
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 5.7e-56 221.9 158 77.8
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.6e-55 220.3 243 57.6
HanXRQChr01g0007101 Helianthus annuus HOM05D007877 ORTHO05D009957 2.0e-53 213.4 134 79.1
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 7.6e-53 211.5 232 56.5
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 7.6e-53 211.5 232 56.5
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 2.2e-52 209.9 134 83.6
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 2.5e-48 196.4 107 94.4
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 1.4e-46 190.7 107 93.5
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 1.4e-46 190.7 107 93.5
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 1.1e-43 181.0 98 94.9
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 1.1e-43 181.0 98 94.9
MD15G1309600 Malus domestica HOM05D007877 ORTHO05D009957 1.4e-43 180.6 107 82.2
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 3.2e-43 179.5 107 88.8
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 6.1e-42 175.3 104 90.4
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.3e-41 173.3 135 68.9
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.1e-40 171.0 98 92.9
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 8.2e-39 164.9 98 87.8
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 8.2e-39 164.9 98 87.8
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 5.3e-38 162.2 98 86.7
unitig_87.g27972 Utricularia gibba HOM05D007877 ORTHO05D009957 5.2e-33 145.6 86 88.4
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 1.5e-32 144.1 77 97.4
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 7.0e-30 135.2 117 65.8
BraSC77t46652Z Brassica rapa HOM05D007877 ORTHO05D009957 9.1e-30 134.8 72 94.4
CARHR288300 Cardamine hirsuta HOM05D007877 ORTHO05D009957 5.9e-29 132.1 69 95.7
Glyma.U026900 Glycine max HOM05D007877 ORTHO05D009957 1.0e-28 131.3 225 41.8
AUR62043917 Chenopodium quinoa HOM05D000743 ORTHO05D000580 2.2e-28 130.2 127 61.4
Solyc10g062060.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.1e-27 127.9 87 73.6
AUR62026822 Chenopodium quinoa HOM05D000743 ORTHO05D000580 1.2e-26 124.4 72 91.7
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 2.1e-26 123.6 94 71.3
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 2.1e-26 123.6 61 96.7
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.1e-26 122.1 91 67.0
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 2.3e-25 120.2 111 62.2
RhsimMtG0001700 Rhododendron simsii HOM05D007877 ORTHO05D009957 5.2e-25 119.0 72 88.9
RhsimMtG0004900 Rhododendron simsii HOM05D007877 ORTHO05D009957 5.2e-25 119.0 72 88.9
Psat0s552g0160 Pisum sativum HOM05D007877 ORTHO05D009957 1.2e-24 117.9 86 74.4
Solyc05g023960.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.4e-24 115.9 74 74.3
Solyc05g023970.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.4e-22 110.2 106 62.3
SHI48166 Sapria himalayana HOM05D007877 ORTHO05D009957 4.5e-21 105.9 184 41.3
SHI32359 Sapria himalayana HOM05D007877 ORTHO05D009957 1.0e-20 104.8 99 59.6
Nitab4.5_0004471g0150 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.5e-20 102.1 86 69.8
Solyc10g062070.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 7.2e-19 98.6 71 74.6
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 2.1e-18 97.1 56 83.9
Solyc04g049250.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.0e-17 93.2 107 52.3
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 8.8e-17 91.7 68 73.5
C09p31620 Brassica napus HOM05D007877 ORTHO05D009957 2.0e-16 90.5 53 84.9
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 3.7e-15 86.3 68 67.6
Peaxi162Scf00931g00018 Petunia axillaris HOM05D007877 ORTHO05D009957 5.4e-14 82.4 45 95.6
SHI24736 Sapria himalayana HOM05D007877 ORTHO05D009957 4.5e-13 79.3 48 77.1
Nn1g10077 Nelumbo nucifera HOM05D007877 ORTHO05D009957 5.0e-12 75.9 45 91.1
Nn1g10099 Nelumbo nucifera HOM05D007877 ORTHO05D009957 5.0e-12 75.9 45 91.1
BolC6t36215H Brassica oleracea HOM05D007877 ORTHO05D009957 1.5e-08 64.3 45 77.8
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 2.2e-07 60.5 37 86.5


User provided reference genes

Program Settings