Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c29g0408041 Lupinus albus HOM05D006604 ORTHO05D007974 8.0e-200 700.3 369 100.0
Lalb_Chr01g0011021 Lupinus albus HOM05D006604 ORTHO05D007974 5.7e-129 464.9 251 97.6
HanXRQMTg0579671 Helianthus annuus HOM05D006604 ORTHO05D007974 1.1e-124 450.7 252 92.9
HanXRQChr11g0320231 Helianthus annuus HOM05D006604 ORTHO05D007974 2.1e-123 446.4 252 92.1
CARHR282790 Cardamine hirsuta HOM05D006604 ORTHO05D007974 5.1e-122 441.8 256 89.8
ATMG01170 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 6.7e-122 441.4 254 90.6
CARHR283400 Cardamine hirsuta HOM05D006604 ORTHO05D007974 6.7e-122 441.4 254 90.6
AT2G07741 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.1e-121 440.7 252 90.9
ATMG00410 Arabidopsis thaliana HOM05D006604 ORTHO05D007974 1.1e-121 440.7 252 90.9
BcaB06g27871 Brassica carinata HOM05D006604 ORTHO05D007974 3.3e-121 439.1 252 90.1
BolSC28t60364H Brassica oleracea HOM05D006604 ORTHO05D007974 3.3e-121 439.1 252 90.1
BraSC177t45762Z Brassica rapa HOM05D006604 ORTHO05D007974 3.3e-121 439.1 252 90.1
BraSC48t46229Z Brassica rapa HOM05D006604 ORTHO05D007974 3.3e-121 439.1 252 90.1
BraSC48t46317Z Brassica rapa HOM05D006604 ORTHO05D007974 3.3e-121 439.1 252 90.1
BraSC54t46362Z Brassica rapa HOM05D006604 ORTHO05D007974 2.4e-119 433.0 253 89.3
CAN.G659.3 Capsicum annuum HOM05D006604 ORTHO05D007974 2.2e-117 426.4 261 85.8
CANSAT16G0041 Cannabis sativa HOM05D006604 ORTHO05D007974 4.2e-116 422.2 239 91.6
SHI53023 Sapria himalayana HOM05D006604 ORTHO05D007974 1.7e-112 410.2 257 85.2
Sed0019535 Sechium edule HOM05D006604 ORTHO05D007974 4.8e-112 408.7 255 86.3
DCAR_032438 Daucus carota HOM05D006604 ORTHO05D007974 3.1e-111 406.0 257 84.4
FAN20G1951 Fragaria x ananassa HOM05D006604 ORTHO05D007974 4.5e-110 402.1 257 82.5
PGR028G0012 Punica granatum HOM05D006604 ORTHO05D007974 1.9e-108 396.7 241 87.6
Aqoxy12s025 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 2.5e-108 396.4 260 81.9
Aqoxy1G02966 Aquilegia oxysepala HOM05D006604 ORTHO05D007974 4.2e-108 395.6 260 81.9
RcHm_v2.0_MTg0498771 Rosa chinensis HOM05D006604 ORTHO05D007974 2.3e-106 389.8 241 85.9
arahy.Tifrunner.gnm1.ann1.QPI8J1 Arachis hypogaea HOM05D006604 ORTHO05D007974 8.8e-106 387.9 275 76.7
HanXRQChr13g0388581 Helianthus annuus HOM05D006604 ORTHO05D007974 1.2e-102 377.5 252 80.6
Nn1g10085 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.5e-102 375.9 241 83.8
Sp3g25850 Schrenkiella parvula HOM05D006604 ORTHO05D007974 1.6e-99 367.1 252 78.2
SEGI_09870 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 7.7e-94 348.2 275 72.4
Gorai.001G160500 Gossypium raimondii HOM05D006604 ORTHO05D007974 1.0e-93 347.8 256 75.4
SalBow1G2924 Salvia bowleyana HOM05D006604 ORTHO05D007974 1.7e-93 347.1 254 75.6
SEGI_16408 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.9e-92 343.6 275 71.3
Nn044s41811 Nelumbo nucifera HOM05D006604 ORTHO05D007974 7.2e-92 341.7 215 84.7
SEGI_38071 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 1.2e-89 334.3 251 75.7
Lsat_1_v5_gn_5_16121 Lactuca sativa HOM05D006604 ORTHO05D007974 5.4e-87 325.5 238 76.1
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 1.0e-85 321.2 277 67.9
LjContig00446g0008739 Lotus japonicus HOM05D006604 ORTHO05D007974 2.5e-84 316.6 190 87.4
SHI50293 Sapria himalayana HOM05D006604 ORTHO05D007974 6.8e-82 308.5 195 84.1
SEGI_30085 Sequoiadendron giganteum HOM05D006604 ORTHO05D007974 2.2e-80 303.5 230 75.7
SHI41364 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-79 301.2 225 74.7
SHI42031 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-79 301.2 225 74.7
SHI54324 Sapria himalayana HOM05D006604 ORTHO05D007974 1.8e-79 300.4 225 74.7
BolSC28t60307H Brassica oleracea HOM05D006604 ORTHO05D007974 2.7e-78 296.6 166 94.0
Nitab4.5_0006806g0110 Nicotiana tabacum HOM05D006604 ORTHO05D007974 3.1e-74 283.1 255 64.3
SGA_v2.0_scaffold245G44658 Striga asiatica HOM05D006604 ORTHO05D007974 4.4e-73 279.3 259 62.9
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 1.2e-67 261.2 161 87.6
CsaV3_UNG209110 Cucumis sativus L. HOM05D006604 ORTHO05D007974 5.2e-66 255.8 224 66.1
LjContig00439g0024190 Lotus japonicus HOM05D006604 ORTHO05D007974 9.8e-65 251.5 151 90.1
arahy.Tifrunner.gnm1.ann1.I4ZC3D Arachis hypogaea HOM05D006604 ORTHO05D007974 1.3e-53 214.5 147 76.9
SMO053G0007 Selaginella moellendorffii HOM05D006604 ORTHO05D007974 7.8e-46 188.7 252 50.8
SHI36697 Sapria himalayana HOM05D006604 ORTHO05D007974 1.3e-45 188.0 136 77.9
SHI50562 Sapria himalayana HOM05D006604 ORTHO05D007974 1.3e-45 188.0 136 77.9
SHI36367 Sapria himalayana HOM05D006604 ORTHO05D007974 6.6e-45 185.7 134 78.4
Nitab4.5_0002418g0200 Nicotiana tabacum HOM05D006604 ORTHO05D007974 8.7e-45 185.3 172 61.6
Potri.014G168000 Populus trichocarpa HOM05D006604 ORTHO05D007974 1.6e-43 181.0 104 89.4
SHI37564 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-42 178.3 137 75.9
Nitab4.5_0002404g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 4.0e-42 176.4 135 68.9
ClCG00G004290 Citrullus lanatus HOM05D006604 ORTHO05D007974 8.4e-40 168.7 166 60.8
SHI53009 Sapria himalayana HOM05D006604 ORTHO05D007974 1.1e-39 168.3 128 75.8
EL10Ac2g04656 Beta vulgaris HOM05D001314 ORTHO05D001165 2.4e-39 167.2 103 83.5
SHI35295 Sapria himalayana HOM05D006604 ORTHO05D007974 4.2e-39 166.4 108 79.6
Os12g0424180 Oryza sativa ssp. japonica HOM05D006604 ORTHO05D007974 9.3e-39 165.2 126 69.8
arahy.Tifrunner.gnm1.ann1.NC5V37 Arachis hypogaea HOM05D006604 ORTHO05D007974 2.7e-38 163.7 108 75.0
SHI35759 Sapria himalayana HOM05D006604 ORTHO05D007974 1.0e-37 161.8 143 65.7
BolC1t03444H Brassica oleracea HOM05D006604 ORTHO05D007974 1.7e-37 161.0 101 80.2
DCAR_031658 Daucus carota HOM05D006604 ORTHO05D007974 2.5e-36 157.1 107 77.6
SHI28635 Sapria himalayana HOM05D006604 ORTHO05D007974 2.8e-35 153.7 148 65.5
unitig_87.g28014 Utricularia gibba HOM05D006604 ORTHO05D007974 2.8e-35 153.7 91 83.5
SHI35478 Sapria himalayana HOM05D006604 ORTHO05D007974 3.6e-35 153.3 139 65.5
Lj2P1232T107 Lonicera japonica HOM05D006604 ORTHO05D007974 3.1e-34 150.2 246 43.1
CARHR288250 Cardamine hirsuta HOM05D006604 ORTHO05D007974 3.4e-33 146.7 91 87.9
Aa31csc464G30 Aethionema arabicum HOM05D006604 ORTHO05D007974 1.6e-30 137.9 90 76.7
GSVIVG01023423001 Vitis vinifera HOM05D006604 ORTHO05D007974 2.7e-30 137.1 90 77.8
Peaxi162Scf00000g01811 Petunia axillaris HOM05D006604 ORTHO05D007974 7.9e-30 135.6 195 50.8
ATR0392G001 Amborella trichopoda HOM05D006604 ORTHO05D007974 1.1e-28 131.7 100 72.0
ClCG06G009210 Citrullus lanatus HOM05D006604 ORTHO05D007974 3.3e-28 130.2 157 54.8
SHI54304 Sapria himalayana HOM05D006604 ORTHO05D007974 1.2e-25 121.7 78 82.1
Mapoly1449s0001 Marchantia polymorpha HOM05D006604 ORTHO05D007974 2.6e-25 120.6 209 34.9
C01p34770 Brassica napus HOM05D013555 ORTHO05D016062 5.8e-25 119.4 72 79.2
LjContig00439g0025482 Lotus japonicus HOM05D006604 ORTHO05D007974 7.6e-25 119.0 74 86.5
C01p34870 Brassica napus HOM05D013555 ORTHO05D016062 1.0e-24 118.6 71 80.3
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 1.7e-24 117.9 120 60.0
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 1.7e-24 117.9 120 60.0
Glyma.16G133700 Glycine max HOM05D006604 ORTHO05D007974 8.4e-24 115.5 72 83.3
RcHm_v2.0_Chr7g0231141 Rosa chinensis HOM05D006604 ORTHO05D007974 8.4e-24 115.5 76 80.3
MD15G1429600 Malus domestica HOM05D006604 ORTHO05D007974 1.4e-23 114.8 81 76.5
SHI33922 Sapria himalayana HOM05D006604 ORTHO05D007974 2.5e-23 114.0 151 50.3
Nitab4.5_0005246g0050 Nicotiana tabacum HOM05D006604 ORTHO05D007974 3.5e-22 110.2 210 40.5
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea HOM05D003517 ORTHO05D009794 4.6e-22 109.8 148 47.3
MELO3C034885.2 Cucumis melo HOM05D006604 ORTHO05D007974 4.6e-22 109.8 141 48.2
Nn7g37740 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.8e-21 107.8 67 85.1
SHI01304 Sapria himalayana HOM05D006604 ORTHO05D007974 5.1e-21 106.3 87 69.0
SHI51349 Sapria himalayana HOM05D006604 ORTHO05D007974 5.1e-21 106.3 72 75.0
MELO3C027032.2 Cucumis melo HOM05D006604 ORTHO05D007974 8.7e-21 105.5 70 80.0
GSVIVG01035307001 Vitis vinifera HOM05D000029 ORTHO05D001072 2.5e-20 104.0 103 62.1
Glyma.01G103450 Glycine max HOM05D006604 ORTHO05D007974 6.2e-19 99.4 73 72.6
Nn6g31985 Nelumbo nucifera HOM05D006604 ORTHO05D007974 1.4e-18 98.2 63 77.8
SHI35935 Sapria himalayana HOM05D006604 ORTHO05D007974 4.5e-17 93.2 64 71.9
MELO3C027524.2 Cucumis melo HOM05D006604 ORTHO05D007974 5.8e-17 92.8 62 79.0
TAR022G0004 Trochodendron aralioides HOM05D004537 ORTHO05D005492 1.3e-16 91.7 100 57.0
Nn2g15525 Nelumbo nucifera HOM05D006604 ORTHO05D007974 3.8e-16 90.1 57 84.2
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 5.0e-16 89.7 58 77.6
MELO3C029409.2 Cucumis melo HOM05D006604 ORTHO05D007974 1.9e-15 87.8 61 78.7
PSO541G5787 Papaver somniferum HOM05D000219 ORTHO05D004649 4.2e-15 86.7 51 90.2
Cre01.g018800 Chlamydomonas reinhardtii HOM05D006604 ORTHO05D007974 1.6e-14 84.7 157 40.1
Nitab4.5_0002418g0090 Nicotiana tabacum HOM05D006604 ORTHO05D007974 7.4e-12 75.9 44 86.4
SHI27524 Sapria himalayana HOM05D006604 ORTHO05D007974 1.6e-11 74.7 65 61.5
SHI55017 Sapria himalayana HOM05D006604 ORTHO05D007974 2.2e-11 74.3 48 81.2
Medtr0082s0160 Medicago truncatula HOM05D005794 ORTHO05D006814 4.8e-11 73.2 47 76.6
SHI31173 Sapria himalayana HOM05D006604 ORTHO05D007974 4.8e-11 73.2 168 36.9
SHI01303 Sapria himalayana HOM05D006604 ORTHO05D007974 1.4e-10 71.6 57 66.7
SHI37140 Sapria himalayana HOM05D006604 ORTHO05D007974 6.9e-10 69.3 45 77.8
ECA039G0009 Erigeron canadensis HOM05D008105 ORTHO05D010309 9.0e-10 68.9 38 94.7
Medtr8g077470 Medicago truncatula HOM05D006604 ORTHO05D007974 9.0e-10 68.9 64 57.8
Eucgr.D01303 Eucalyptus grandis HOM05D006604 ORTHO05D007974 1.5e-09 68.2 82 47.6
SHI36463 Sapria himalayana HOM05D006604 ORTHO05D007974 3.4e-09 67.0 65 58.5
ECA003G0002 Erigeron canadensis HOM05D006604 ORTHO05D007974 1.0e-08 65.5 36 94.4
SHI12109 Sapria himalayana HOM05D006604 ORTHO05D007974 1.3e-08 65.1 46 69.6
Medtr0248s0030 Medicago truncatula HOM05D006604 ORTHO05D007974 1.2e-06 58.5 31 93.5


User provided reference genes

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