Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 1.6e-37 159.1 91 100.0
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 1.6e-37 159.1 91 100.0
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 1.6e-37 159.1 91 100.0
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 2.1e-37 158.7 91 98.9
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 3.1e-36 154.8 91 97.8
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 3.1e-36 154.8 91 97.8
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 3.1e-36 154.8 91 97.8
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 5.3e-36 154.1 91 97.8
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 6.9e-36 153.7 90 97.8
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 6.9e-36 153.7 90 97.8
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 9.0e-36 153.3 91 96.7
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 95.6
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 95.6
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 96.7
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 96.7
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 96.7
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 96.7
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 2.6e-35 151.8 91 96.7
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 3.4e-35 151.4 85 98.8
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 3.4e-35 151.4 85 98.8
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 3.4e-35 151.4 85 98.8
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 4.5e-35 151.0 84 100.0
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 4.5e-35 151.0 84 100.0
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 6.4e-34 147.1 85 97.6
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 6.4e-34 147.1 85 97.6
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.1e-33 146.4 85 96.5
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.1e-33 146.4 85 96.5
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 4.2e-33 144.4 84 97.6
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 5.5e-33 144.1 85 95.3
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 9.3e-33 143.3 83 97.6
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 7.9e-32 140.2 87 93.1
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 1.8e-31 139.0 88 92.0
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 3.9e-31 137.9 91 90.1
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 3.9e-31 137.9 91 90.1
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 6.7e-31 137.1 81 97.5
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.1e-30 136.3 86 90.7
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.5e-30 136.0 85 90.6
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 7.4e-30 133.7 87 88.5
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 2.1e-29 132.1 84 91.7
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 2.1e-29 132.1 78 97.4
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 6.2e-29 130.6 91 87.9
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 6.2e-29 130.6 91 87.9
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 6.2e-29 130.6 91 87.9
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 9.0e-28 126.7 74 97.3
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 9.0e-28 126.7 74 97.3
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 5.8e-27 124.0 72 97.2
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 5.8e-27 124.0 81 86.4
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 2.2e-26 122.1 70 97.1
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.2e-26 122.1 70 98.6
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 2.5e-25 118.6 70 95.7
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 2.1e-24 115.5 70 94.3
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 1.3e-23 112.8 71 93.0
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 3.0e-23 111.7 90 76.7
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 2.5e-22 108.6 64 96.9
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 3.3e-22 108.2 69 91.3
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 9.7e-22 106.7 62 96.8
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 1.8e-20 102.4 63 88.9
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 6.9e-20 100.5 63 92.1
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 5.5e-17 90.9 67 80.6
HanXRQChr07g0189011 Helianthus annuus HOM05D008204 ORTHO05D010378 1.2e-16 89.7 54 94.4
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 3.0e-15 85.1 63 84.1
PSO764G0230 Papaver somniferum HOM05D017042 ORTHO05D018469 1.9e-14 82.4 55 83.6
unitig_87.g27951 Utricularia gibba HOM05D008204 ORTHO05D010378 2.8e-13 78.6 45 97.8
BraSC54t46364Z Brassica rapa HOM05D008204 ORTHO05D010378 4.8e-13 77.8 46 95.7
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 6.3e-13 77.4 45 95.6
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 6.3e-13 77.4 45 95.6
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 9.1e-12 73.6 54 77.8
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 6.5e-10 67.4 50 78.0
SEGI_26273 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 3.2e-09 65.1 57 71.9
Mapoly0002s0163 Marchantia polymorpha HOM05D008204 ORTHO05D010378 5.5e-09 64.3 45 82.2
C02p41480 Brassica napus HOM05D008204 ORTHO05D010378 3.6e-08 61.6 71 60.6
BolC2t10165H Brassica oleracea HOM05D008204 ORTHO05D010378 3.6e-08 61.6 71 60.6
Nitab4.5_0000172g1780 Nicotiana tabacum HOM05D008204 ORTHO05D010378 4.7e-08 61.2 43 81.4
SHI07475 Sapria himalayana HOM05D008204 ORTHO05D010378 1.8e-07 59.3 70 55.7
Nitab4.5_0000172g2070 Nicotiana tabacum HOM05D008204 ORTHO05D010378 2.0e-06 55.8 32 90.6
BraA02t07598Z Brassica rapa HOM05D008204 ORTHO05D010378 7.4e-06 53.9 38 76.3
Nitab4.5_0001152g0280 Nicotiana tabacum HOM05D008204 ORTHO05D016167 7.4e-06 53.9 37 81.1


User provided reference genes

Program Settings