Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 7.1e-92 340.5 162 100.0
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-87 325.1 191 84.8
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-87 325.1 191 84.8
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-87 325.1 191 84.8
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-84 316.6 191 83.2
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-84 316.6 191 83.2
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 5.4e-84 314.3 191 82.7
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 5.4e-84 314.3 191 82.7
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 5.4e-84 314.3 191 82.7
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 7.1e-84 313.9 191 82.2
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.2e-83 313.2 191 82.2
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.6e-83 312.8 191 82.2
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 2.7e-83 312.0 191 82.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.7e-83 312.0 191 81.7
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.7e-83 312.0 191 81.7
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.6e-83 311.2 191 81.7
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 6.0e-83 310.8 191 81.7
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 5.1e-82 307.8 191 80.6
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.9e-81 305.8 191 81.2
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 3.3e-81 305.1 191 81.2
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 3.3e-81 305.1 191 81.2
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 5.6e-81 304.3 191 80.1
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.1e-80 302.4 191 80.1
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 8.1e-80 300.4 189 80.4
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-79 300.1 191 80.1
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-79 300.1 191 80.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-79 300.1 184 82.1
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.4e-79 298.9 188 79.3
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.3e-79 297.7 188 78.7
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 5.3e-79 297.7 191 78.5
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 3.4e-78 295.0 188 78.7
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 3.4e-78 295.0 191 79.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 2.2e-77 292.4 191 78.5
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.2e-75 286.6 191 77.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.0e-75 284.3 189 77.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-73 280.0 179 78.8
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 9.6e-73 276.9 188 73.4
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.1e-71 273.5 186 74.2
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.1e-71 273.5 186 74.2
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 2.4e-71 272.3 170 81.8
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 3.1e-71 271.9 170 81.8
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.0e-71 271.6 170 81.2
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 7.6e-70 267.3 170 80.0
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.3e-69 266.5 170 80.6
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.7e-69 266.2 170 80.6
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.7e-69 266.2 170 80.0
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.9e-69 265.4 167 80.8
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 7.1e-68 260.8 168 79.8
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 9.3e-68 260.4 170 79.4
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 4.6e-67 258.1 168 79.2
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.6e-67 258.1 166 79.5
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.6e-67 258.1 170 78.8
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.6e-67 258.1 170 78.8
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.8e-66 256.1 170 78.2
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-65 253.4 177 74.0
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-65 253.1 170 76.5
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 7.4e-65 250.8 121 99.2
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 7.4e-65 250.8 121 99.2
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.3e-64 250.0 165 77.6
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 4.8e-64 248.1 121 98.3
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 3.1e-63 245.4 185 68.6
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-63 244.6 163 76.7
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.9e-63 244.2 132 90.2
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 9.0e-63 243.8 170 75.3
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.5e-62 243.0 121 96.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.4e-62 241.9 166 75.3
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-62 240.7 121 95.9
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.3e-61 240.0 161 75.2
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-61 238.0 179 69.8
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 9.3e-60 233.8 168 71.4
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-59 233.4 177 68.4
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-59 233.4 118 94.1
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-58 229.6 121 91.7
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 2.3e-58 229.2 191 63.9
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-58 228.0 165 70.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-58 227.3 121 90.9
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-58 227.3 121 90.9
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-57 226.5 164 70.7
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 9.6e-57 223.8 164 71.3
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-56 223.4 115 92.2
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 3.7e-56 221.9 154 74.7
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-55 219.5 121 87.6
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-55 217.6 167 66.5
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.2e-54 216.9 148 75.0
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-54 215.7 120 88.3
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-54 214.2 119 87.4
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 2.2e-53 212.6 100 99.0
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 8.4e-53 210.7 153 73.2
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.4e-52 209.9 99 99.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.5e-52 209.1 109 91.7
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-52 208.4 119 86.6
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 5.5e-52 208.0 189 61.9
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 9.3e-52 207.2 97 99.0
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.6e-51 206.5 96 100.0
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.6e-51 206.5 99 98.0
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.8e-50 203.0 189 61.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-50 203.0 114 86.8
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.7e-50 200.7 103 92.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-48 196.4 115 85.2
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-46 188.0 142 69.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 7.7e-46 187.6 100 89.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.2e-45 186.0 99 88.9
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-44 181.0 131 71.0
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-44 180.6 155 63.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 1.6e-43 179.9 170 62.4
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-43 178.7 94 89.4
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 5.1e-42 174.9 79 100.0
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.4e-39 166.8 115 67.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 5.3e-39 164.9 86 91.9
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-37 159.5 128 66.4
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 2.9e-37 159.1 116 61.2
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-37 159.1 81 92.6
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-37 159.1 87 85.1
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-37 159.1 87 85.1
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 8.5e-37 157.5 74 98.6
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 8.5e-37 157.5 74 98.6
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.2e-36 155.2 114 67.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 5.5e-36 154.8 74 97.3
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 5.5e-36 154.8 74 97.3
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 5.5e-36 154.8 74 97.3
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 5.5e-36 154.8 74 97.3
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 7.2e-36 154.5 136 63.2
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 7.2e-36 154.5 74 94.6
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.0e-34 149.1 71 95.8
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-34 147.5 81 85.2
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.7e-33 144.8 72 93.1
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-32 142.1 74 89.2
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-32 141.4 73 90.4
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-32 141.0 74 89.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-31 139.8 74 89.2
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-31 139.4 74 87.8
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-31 139.0 74 87.8
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.0e-31 137.9 74 86.5
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-30 136.3 72 88.9
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 3.5e-30 135.6 185 47.0
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-30 135.2 70 90.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-30 135.2 74 86.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-29 133.3 72 86.1
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.8e-29 132.1 121 60.3
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-29 131.0 74 85.1
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.9e-28 129.8 67 88.1
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-28 129.8 74 85.1
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-28 128.3 71 85.9
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-27 125.6 74 82.4
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.6e-27 125.6 102 67.6
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.4e-26 123.6 110 55.5
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 3.0e-26 122.5 109 63.3
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 1.1e-25 120.6 59 96.6
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.3e-24 114.8 64 84.4
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-23 111.7 143 48.3
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.7e-21 106.7 103 59.2
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 6.5e-21 104.8 96 59.4
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-20 102.4 94 61.7
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-20 100.9 105 57.1
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-20 100.9 105 57.1
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-19 99.8 72 69.4
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-17 92.8 69 68.1
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-17 92.0 58 77.6
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 4.8e-16 88.6 152 40.1
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.3e-16 87.8 44 93.2
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 1.2e-14 84.0 62 69.4
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 1.6e-14 83.6 64 65.6
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 2.9e-13 79.3 42 90.5
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.9e-13 79.3 45 80.0
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 8.5e-13 77.8 42 92.9
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-11 73.6 50 72.0
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 8.8e-10 67.8 86 46.5
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.0e-09 66.6 35 85.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 5.7e-09 65.1 30 96.7
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 7.5e-09 64.7 30 93.3
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 2.2e-08 63.2 39 84.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-08 61.6 94 42.6
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-08 61.2 34 82.4


User provided reference genes

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