Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.6e-74 282.0 142 100.0
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.6e-74 282.0 142 100.0
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 9.3e-72 273.5 142 97.9
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 9.3e-72 273.5 142 97.9
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 3.8e-33 145.2 104 70.2
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.4e-30 136.7 133 57.9
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 9.1e-27 124.0 130 54.6
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 1.3e-25 120.2 123 54.5
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.7e-25 119.8 124 54.0
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.7e-25 119.8 124 54.0
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 5.0e-25 118.2 125 52.8
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 6.5e-25 117.9 136 50.0
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.1e-24 117.1 104 59.6
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.1e-24 117.1 116 56.0
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 7.2e-24 114.4 129 47.3
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 9.4e-24 114.0 91 63.7
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 4.7e-23 111.7 125 51.2
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 4.7e-23 111.7 130 50.0
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 6.1e-23 111.3 117 55.6
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 8.0e-23 110.9 130 49.2
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 2.3e-22 109.4 168 41.7
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 4.0e-22 108.6 132 48.5
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 4.0e-22 108.6 126 53.2
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 8.8e-22 107.5 125 48.8
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 2.6e-21 105.9 106 54.7
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 2.6e-21 105.9 104 53.8
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 2.6e-21 105.9 137 48.9
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 2.6e-21 105.9 134 47.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 2.6e-21 105.9 106 53.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 4.4e-21 105.1 124 50.0
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 7.5e-21 104.4 123 47.2
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 7.5e-21 104.4 106 54.7
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 1.3e-20 103.6 129 46.5
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.3e-20 103.6 132 50.0
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 1.7e-20 103.2 131 48.1
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.2e-20 102.8 132 48.5
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 2.8e-20 102.4 107 49.5
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 2.8e-20 102.4 129 49.6
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.8e-20 102.4 132 48.5
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 2.8e-20 102.4 131 48.1
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 3.7e-20 102.1 127 48.8
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 6.3e-20 101.3 96 54.2
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 8.3e-20 100.9 126 48.4
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.1e-19 100.5 125 46.4
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 1.1e-19 100.5 131 45.0
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.4e-19 100.1 132 47.7
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 1.4e-19 100.1 104 51.9
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.8e-19 99.8 124 47.6
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 1.8e-19 99.8 128 46.1
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 3.1e-19 99.0 125 48.0
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.4e-19 98.2 119 48.7
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 5.4e-19 98.2 132 44.7
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 5.4e-19 98.2 95 54.7
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 7.0e-19 97.8 121 47.1
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 9.1e-19 97.4 105 49.5
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 1.6e-18 96.7 107 50.5
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 2.0e-18 96.3 118 46.6
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.7e-18 95.9 125 45.6
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 4.5e-18 95.1 103 52.4
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.5e-18 95.1 125 45.6
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 7.7e-18 94.4 118 49.2
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 7.7e-18 94.4 88 53.4
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 1.0e-17 94.0 130 43.1
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.0e-17 94.0 88 54.5
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.7e-17 93.2 126 46.8
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.7e-17 93.2 131 48.9
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.3e-17 92.8 130 46.2
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 3.8e-17 92.0 109 49.5
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.8e-17 92.0 126 47.6
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 6.5e-17 91.3 139 40.3
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-16 90.1 121 45.5
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-16 90.1 115 45.2
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.5e-16 90.1 130 43.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.5e-16 89.4 124 46.0
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.2e-15 87.0 139 43.9
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 1.6e-15 86.7 141 39.7
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 2.8e-15 85.9 83 51.8
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 4.7e-15 85.1 90 52.2
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 6.1e-15 84.7 160 38.8
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.0e-14 84.0 135 37.0
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 4.0e-14 82.0 139 41.7
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 8.9e-14 80.9 168 36.9
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.2e-13 80.5 142 38.0
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.5e-13 80.1 56 67.9
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 2.0e-13 79.7 120 40.8
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 2.0e-13 79.7 115 43.5
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 2.6e-13 79.3 83 47.0
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 4.4e-13 78.6 117 40.2
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.7e-12 76.6 84 45.2
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 3.7e-12 75.5 115 40.9
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 3.1e-11 72.4 54 61.1
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 7.0e-11 71.2 121 42.1
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.2e-10 70.5 54 59.3
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 7.8e-10 67.8 123 36.6
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.3e-09 67.0 59 54.2
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.3e-09 66.2 125 36.0
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.8e-09 65.5 48 64.6
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.2e-07 60.5 55 56.4
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 4.0e-06 55.5 53 47.2


User provided reference genes

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