Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31221 Selenicereus undatus HOM05D003108 ORTHO05D000003 2.3e-66 255.4 125 100.0
Hund17611 Selenicereus undatus HOM05D003108 ORTHO05D000003 2.7e-51 205.3 117 86.3
EL10Ac1g01814 Beta vulgaris HOM05D003108 ORTHO05D000003 4.9e-16 88.2 116 46.6
Sc15g0006470 Simmondsia chinensis HOM05D003108 ORTHO05D000003 3.2e-15 85.5 90 51.1
PGR031G0001 Punica granatum HOM05D003108 ORTHO05D000003 7.8e-14 80.9 112 44.6
Dinv39344 Davidia involucrata HOM05D003108 ORTHO05D000003 3.0e-13 79.0 107 47.7
TAR625G0703 Trochodendron aralioides HOM05D003108 ORTHO05D000003 2.1e-11 72.8 71 49.3
Ah.05g168890 Amaranthus hybridus HOM05D003108 ORTHO05D000003 3.6e-11 72.0 54 64.8
AUR62031374 Chenopodium quinoa HOM05D003108 ORTHO05D000003 3.6e-11 72.0 108 45.4
CSS0020615 Camellia sinensis var. sinensis HOM05D003108 ORTHO05D000003 1.4e-10 70.1 70 51.4
CSS0040327 Camellia sinensis var. sinensis HOM05D003108 ORTHO05D000003 1.4e-10 70.1 70 51.4
VMungo0647G2206 Vigna mungo HOM05D003108 ORTHO05D000003 1.4e-10 70.1 106 37.7
Hma1.2p1_0337F.1_g129250 Hydrangea macrophylla HOM05D003108 ORTHO05D000003 1.8e-10 69.7 70 48.6
Oeu009567.1 Olea europaea HOM05D003108 ORTHO05D000003 1.8e-10 69.7 64 54.7
Solyc04g079410.3 Solanum lycopersicum HOM05D003108 ORTHO05D000003 1.8e-10 69.7 64 51.6
Sopen04g033020 Solanum pennellii HOM05D003108 ORTHO05D000003 1.8e-10 69.7 64 51.6
PGSC0003DMG400007998 Solanum tuberosum HOM05D003108 ORTHO05D000003 1.8e-10 69.7 64 51.6
Rhsim06G0042100 Rhododendron simsii HOM05D003108 ORTHO05D000003 2.3e-10 69.3 116 39.7
Glyma.14G079700 Glycine max HOM05D003108 ORTHO05D000003 5.2e-10 68.2 80 46.2
Thecc.08G015000 Theobroma cacao HOM05D003108 ORTHO05D000003 2.6e-09 65.9 81 48.1
Glyma.14G079900 Glycine max HOM05D003108 ORTHO05D000003 5.8e-09 64.7 106 41.5
Ca_13312_v3 Cicer arietinum L. HOM05D003108 ORTHO05D000003 7.5e-09 64.3 63 47.6
Ca_30258_v3 Cicer arietinum L. HOM05D003108 ORTHO05D000003 7.5e-09 64.3 63 47.6
Haze_22194 Corylus avellana HOM05D003108 ORTHO05D000003 1.7e-08 63.2 89 43.8
GSVIVG01009574001 Vitis vinifera HOM05D003108 ORTHO05D000003 1.7e-08 63.2 102 38.2
Duzib116G0569 Durio zibethinus HOM05D003108 ORTHO05D000003 2.2e-08 62.8 76 50.0
Psat6g011160 Pisum sativum HOM05D003108 ORTHO05D000003 2.2e-08 62.8 63 46.0
Lj4A49T80 Lonicera japonica HOM05D003108 ORTHO05D000003 2.9e-08 62.4 68 45.6
Nitab4.5_0000068g0300 Nicotiana tabacum HOM05D003108 ORTHO05D000003 2.9e-08 62.4 109 39.4
Actinidia15271 Actinidia chinensis HOM05D003108 ORTHO05D000003 3.7e-08 62.0 70 47.1
Nitab4.5_0011646g0010 Nicotiana tabacum HOM05D003108 ORTHO05D000003 3.7e-08 62.0 64 48.4
Nn5g29345 Nelumbo nucifera HOM05D003108 ORTHO05D000003 8.3e-08 60.8 71 43.7
Phvul.001G019000 Phaseolus vulgaris HOM05D003108 ORTHO05D000003 8.3e-08 60.8 101 35.6
Cfa013576 Carpinus fangiana HOM05D003108 ORTHO05D000003 1.1e-07 60.5 117 35.0
TPR.G13680 Trifolium pratense HOM05D003108 ORTHO05D000003 1.9e-07 59.7 63 46.0
Ciclev10002154m.g Citrus clementina HOM05D003108 ORTHO05D000003 2.4e-07 59.3 78 47.4
Rhsim06G0033100 Rhododendron simsii HOM05D003108 ORTHO05D000003 2.4e-07 59.3 115 33.9
COL.COLO4_26441 Corchorus olitorius HOM05D003108 ORTHO05D000003 9.2e-07 57.4 70 48.6
Peaxi162Scf01092g00113 Petunia axillaris HOM05D003108 ORTHO05D000003 1.6e-06 56.6 91 38.5
CiPaw.16G050200 Carya illinoinensis HOM05D003108 ORTHO05D000003 2.7e-06 55.8 98 37.8
Gohir.A05G199800 Gossypium hirsutum HOM05D003108 ORTHO05D000003 2.7e-06 55.8 107 39.3
Lj5g0023909 Lotus japonicus HOM05D003108 ORTHO05D000003 3.5e-06 55.5 77 37.7
TWI56G1072 Tripterygium wilfordii HOM05D003108 ORTHO05D000003 6.0e-06 54.7 95 35.8


User provided reference genes

Program Settings