Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 9.6e-143 510.4 302 100.0
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 3.0e-136 488.8 302 96.4
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 2.4e-48 196.8 316 49.4
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-46 190.3 287 51.2
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 2.2e-46 190.3 287 51.2
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 4.4e-39 166.0 173 57.8
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 4.8e-33 146.0 174 52.3
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 3.4e-31 139.8 274 40.5
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 7.6e-31 138.7 190 47.4
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 9.9e-31 138.3 282 39.4
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 9.9e-31 138.3 282 39.4
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.3e-30 137.9 188 47.3
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 4.9e-30 136.0 282 39.7
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 6.4e-30 135.6 282 38.7
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 2.4e-29 133.7 139 60.4
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 4.2e-29 132.9 178 53.9
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 5.5e-29 132.5 286 41.3
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 5.5e-29 132.5 159 53.5
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 7.1e-29 132.1 187 46.0
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 9.3e-29 131.7 189 47.6
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 9.3e-29 131.7 93 71.0
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 1.6e-28 131.0 281 39.1
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 1.6e-28 131.0 286 41.6
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.6e-28 131.0 283 39.9
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 2.1e-28 130.6 108 65.7
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 2.1e-28 130.6 282 40.1
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 2.7e-28 130.2 180 48.9
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 7.9e-28 128.6 172 51.2
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 7.9e-28 128.6 175 54.3
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.3e-27 127.9 176 50.0
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 1.8e-27 127.5 115 60.0
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 1.8e-27 127.5 176 50.6
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 2.3e-27 127.1 193 44.0
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 3.0e-27 126.7 194 44.3
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 3.0e-27 126.7 92 70.7
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 3.9e-27 126.3 129 59.7
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 6.7e-27 125.6 281 40.6
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 8.7e-27 125.2 182 44.5
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.1e-26 124.8 112 64.3
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 1.5e-26 124.4 135 57.8
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.5e-26 124.4 184 48.9
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 4.3e-26 122.9 96 69.8
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 4.3e-26 122.9 127 58.3
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 7.4e-26 122.1 175 51.4
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 1.6e-25 120.9 136 54.4
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.6e-25 120.9 136 54.4
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 1.6e-25 120.9 174 48.9
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 1.6e-25 120.9 295 41.0
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 1.6e-25 120.9 186 47.8
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 2.8e-25 120.2 136 54.4
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 6.2e-25 119.0 282 40.8
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 6.2e-25 119.0 281 40.6
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.1e-24 118.2 290 37.2
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.1e-24 118.2 153 51.0
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 1.8e-24 117.5 179 48.6
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 2.4e-24 117.1 268 38.4
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 9.0e-24 115.2 190 45.3
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.5e-23 114.4 180 46.1
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 4.5e-23 112.8 282 40.1
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 7.6e-23 112.1 83 73.5
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.7e-22 110.9 108 58.3
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.7e-22 110.9 136 52.9
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.7e-22 110.9 184 45.1
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.9e-22 110.2 108 60.2
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 2.9e-22 110.2 191 45.0
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 3.8e-22 109.8 172 47.1
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.5e-22 109.0 136 52.2
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 8.4e-22 108.6 99 62.6
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 1.1e-21 108.2 273 35.9
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.1e-21 108.2 191 45.0
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 3.2e-21 106.7 187 45.5
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 7.1e-21 105.5 276 40.9
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 2.1e-20 104.0 132 50.8
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 2.1e-20 104.0 84 63.1
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 3.5e-20 103.2 94 58.5
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 4.6e-20 102.8 109 55.0
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 7.9e-20 102.1 188 41.0
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 1.3e-19 101.3 83 65.1
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.8e-19 100.9 181 39.2
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 2.3e-19 100.5 195 41.0
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 1.1e-18 98.2 182 41.2
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.5e-18 97.8 181 38.7
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 3.3e-18 96.7 145 49.0
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 9.6e-18 95.1 115 53.9
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 3.7e-17 93.2 142 47.2
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 6.3e-17 92.4 180 41.7
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 6.3e-17 92.4 105 57.1
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 1.1e-16 91.7 122 48.4
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.1e-16 91.7 275 35.6
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 9.0e-16 88.6 139 44.6
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 9.0e-16 88.6 139 44.6
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 1.2e-15 88.2 209 38.8
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 6.5e-14 82.4 140 45.0
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 8.4e-14 82.0 138 44.9
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 8.4e-14 82.0 173 41.0
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 8.4e-14 82.0 173 41.0
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.4e-13 81.3 138 44.9
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 2.5e-13 80.5 141 44.7
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 2.5e-13 80.5 141 44.7
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 2.5e-13 80.5 142 42.3
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 4.2e-13 79.7 119 46.2
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 4.2e-13 79.7 341 31.4
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 4.6e-12 76.3 74 60.8
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 7.9e-12 75.5 83 53.0
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 2.5e-10 70.5 144 40.3
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 2.5e-10 70.5 82 51.2
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 9.7e-10 68.6 55 65.5
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.3e-09 68.2 65 56.9
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 1.3e-09 68.2 115 39.1
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 4.8e-09 66.2 119 45.4
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.8e-08 64.3 58 58.6
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 6.9e-08 62.4 186 30.1
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.2e-07 61.6 98 42.9
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 4.5e-07 59.7 37 75.7
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 7.7e-07 58.9 117 41.0
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.0e-06 58.5 114 44.7
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 1.7e-06 57.8 85 44.7
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 5.0e-06 56.2 105 41.9
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 6.5e-06 55.8 99 39.4


User provided reference genes

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