Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.8e-73 278.1 142 100.0
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.8e-73 278.1 142 100.0
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.1e-71 272.3 142 97.9
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.1e-71 272.3 142 97.9
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.0e-33 147.1 104 71.2
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 4.7e-31 138.3 133 58.6
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.8e-27 126.3 130 55.4
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.9e-25 119.0 124 54.0
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 2.9e-25 119.0 124 54.0
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.0e-25 118.2 132 51.5
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 2.5e-24 115.9 104 59.6
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.5e-24 115.9 91 64.8
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.5e-24 115.9 107 55.1
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 4.2e-24 115.2 136 50.0
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 5.5e-24 114.8 123 52.8
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 7.2e-24 114.4 116 55.2
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.0e-22 110.5 125 51.2
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 1.8e-22 109.8 107 56.1
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 3.0e-22 109.0 117 54.7
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 4.0e-22 108.6 130 49.2
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 6.8e-22 107.8 168 41.7
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 6.8e-22 107.8 130 49.2
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 2.6e-21 105.9 126 52.4
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 4.4e-21 105.1 131 46.6
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 4.4e-21 105.1 104 53.8
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 5.7e-21 104.8 124 50.0
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 1.3e-20 103.6 134 47.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 1.3e-20 103.6 106 52.8
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 1.7e-20 103.2 107 49.5
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 1.7e-20 103.2 132 50.0
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 2.8e-20 102.4 104 54.8
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 2.8e-20 102.4 124 49.2
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 2.8e-20 102.4 131 48.1
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 2.8e-20 102.4 131 48.1
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 3.7e-20 102.1 129 45.0
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 3.7e-20 102.1 106 53.8
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 4.8e-20 101.7 131 45.0
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 4.8e-20 101.7 129 46.5
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 4.8e-20 101.7 127 50.4
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 6.3e-20 101.3 127 48.8
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 8.3e-20 100.9 125 46.4
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.1e-19 100.5 96 54.2
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.4e-19 100.1 128 50.0
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.8e-19 99.8 126 48.4
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.4e-19 99.4 127 49.6
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.4e-19 99.4 104 51.9
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 3.1e-19 99.0 119 48.7
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.1e-19 99.0 127 49.6
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 7.0e-19 97.8 125 48.0
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 9.1e-19 97.4 122 48.4
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 9.1e-19 97.4 128 45.3
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 1.2e-18 97.1 124 46.8
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.2e-18 97.1 95 54.7
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 2.0e-18 96.3 105 49.5
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 3.5e-18 95.5 132 43.9
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 3.5e-18 95.5 107 50.5
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 7.7e-18 94.4 103 52.4
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 7.7e-18 94.4 129 44.2
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.0e-17 94.0 88 53.4
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 1.3e-17 93.6 125 44.8
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 1.7e-17 93.2 126 46.8
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.7e-17 93.2 88 54.5
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.7e-17 93.2 129 42.6
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 2.3e-17 92.8 109 49.5
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 3.8e-17 92.0 129 43.4
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 5.0e-17 91.7 130 46.2
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 5.0e-17 91.7 118 48.3
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 8.6e-17 90.9 126 47.6
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.1e-16 90.5 131 48.1
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.5e-16 90.1 115 45.2
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 1.5e-16 90.1 141 41.8
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.5e-16 90.1 130 43.1
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.5e-16 89.4 124 45.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 9.5e-16 87.4 130 43.8
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.8e-15 85.9 139 43.9
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 3.6e-15 85.5 83 51.8
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 3.6e-15 85.5 141 39.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 6.1e-15 84.7 90 52.2
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 8.0e-15 84.3 160 38.8
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.0e-14 82.4 135 37.0
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 4.0e-14 82.0 139 41.7
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 2.0e-13 79.7 115 43.5
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 2.6e-13 79.3 56 67.9
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.4e-13 79.0 120 40.8
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 5.7e-13 78.2 117 40.2
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 5.7e-13 78.2 83 47.0
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 7.5e-13 77.8 142 37.3
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.3e-12 77.0 168 36.3
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 3.7e-12 75.5 115 40.9
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 1.8e-11 73.2 151 36.4
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 7.0e-11 71.2 54 61.1
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 7.0e-11 71.2 121 42.1
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.6e-10 70.1 54 59.3
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 7.8e-10 67.8 59 54.2
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 5.0e-09 65.1 123 35.8
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 8.6e-09 64.3 48 64.6
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.5e-08 63.5 123 35.8
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 1.2e-07 60.5 55 56.4
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 8.9e-06 54.3 53 47.2


User provided reference genes

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