Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10285 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-67 259.2 139 100.0
Hund30552 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-67 259.2 139 100.0
Hund30554 Selenicereus undatus HOM05D005015 ORTHO05D005696 1.8e-67 259.2 139 100.0
Hund03959 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund19316 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27454 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27640 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27652 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27672 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27697 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27742 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27807 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27824 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27931 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27946 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund27994 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28016 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28060 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28129 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28142 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28151 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28161 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28177 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28187 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28210 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28258 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28390 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28502 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28650 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund28906 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund29887 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund30205 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund30312 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund30436 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund30665 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Hund31017 Selenicereus undatus HOM05D005015 ORTHO05D005696 5.4e-64 247.7 132 100.0
Ah.10g027630 Amaranthus hybridus HOM05D005015 ORTHO05D005696 9.1e-56 220.3 132 90.2
Ah.10g027770 Amaranthus hybridus HOM05D005015 ORTHO05D005696 9.1e-56 220.3 132 90.2
Hma1.2p1_2181F.1_g316260 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 9.1e-56 220.3 138 86.2
Hma1.2p1_2181F.1_g316275 Hydrangea macrophylla HOM05D005015 ORTHO05D005696 9.1e-56 220.3 138 86.2
Potri.013G137900 Populus trichocarpa HOM05D005015 ORTHO05D005696 9.1e-56 220.3 133 89.5
PGR111G0021 Punica granatum HOM05D005015 ORTHO05D005696 2.7e-55 218.8 133 88.0
CSS0020927 Camellia sinensis var. sinensis HOM05D005015 ORTHO05D005696 1.0e-54 216.9 139 84.9
Cpa.g.sc30.79 Carica papaya HOM05D005015 ORTHO05D005696 1.9e-53 212.6 132 88.6
Solyc00g500322.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.9e-53 212.6 133 86.5
Lj2C1239T52 Lonicera japonica HOM05D005015 ORTHO05D005696 2.5e-53 212.2 132 86.4
LjContig00489g0021854 Lotus japonicus HOM05D005015 ORTHO05D005696 4.3e-53 211.5 139 83.5
Peaxi162Scf00379g00087 Petunia axillaris HOM05D005015 ORTHO05D005696 2.8e-52 208.8 139 82.0
Lsat_1_v5_gn_1_38680 Lactuca sativa HOM05D005015 ORTHO05D005696 4.0e-51 204.9 132 84.8
CARHR281880 Cardamine hirsuta HOM05D005015 ORTHO05D005696 5.2e-51 204.5 133 83.5
ATCG00130 Arabidopsis thaliana HOM05D005015 ORTHO05D005696 1.2e-50 203.4 133 82.7
RcHm_v2.0_CPg0502451 Rosa chinensis HOM05D005015 ORTHO05D005696 1.2e-50 203.4 133 82.0
BNapus_Darmor_BZH_scaffold_253p00020 Brassica napus HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BolSC29t60569H Brassica oleracea HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BolSC37t60772H Brassica oleracea HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BolSC45t60880H Brassica oleracea HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BolSC46t60983H Brassica oleracea HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BraSC140t45592Z Brassica rapa HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BraSC140t45595Z Brassica rapa HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
BraSC179t45790Z Brassica rapa HOM05D005015 ORTHO05D005696 2.0e-50 202.6 139 79.9
Eucgr.H02991 Eucalyptus grandis HOM05D005015 ORTHO05D005696 2.0e-50 202.6 140 80.7
Aa31csc39G190 Aethionema arabicum HOM05D005015 ORTHO05D005696 3.4e-50 201.8 139 79.1
CAN.G877.4 Capsicum annuum HOM05D005015 ORTHO05D005696 7.5e-50 200.7 133 82.0
EL10As12g24014 Beta vulgaris HOM05D000743 ORTHO05D000580 2.2e-49 199.1 120 90.8
Gohir.A11G101400 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.9e-49 198.7 129 83.7
Sed0007367 Sechium edule HOM05D005015 ORTHO05D005696 2.9e-49 198.7 139 78.4
Sed0025514 Sechium edule HOM05D005015 ORTHO05D005696 2.9e-49 198.7 139 78.4
CAN.G612.5 Capsicum annuum HOM05D005015 ORTHO05D005696 6.4e-49 197.6 139 77.7
LjContig00318g0021444 Lotus japonicus HOM05D005015 ORTHO05D005696 1.1e-48 196.8 135 80.0
DCAR_032470 Daucus carota HOM05D005015 ORTHO05D005696 3.2e-48 195.3 129 82.2
BolSC45t60933H Brassica oleracea HOM05D005015 ORTHO05D005696 4.1e-48 194.9 140 77.9
Peaxi162Scf00211g00235 Petunia axillaris HOM05D000743 ORTHO05D005696 3.5e-47 191.8 127 82.7
Gorai.003G134800 Gossypium raimondii HOM05D005015 ORTHO05D005696 1.0e-46 190.3 131 80.9
Lalb_Chr03g0042651 Lupinus albus HOM05D005015 ORTHO05D005696 1.7e-46 189.5 133 78.9
SabraPtG0000800 Salix brachista HOM05D000743 ORTHO05D000580 8.6e-46 187.2 127 81.1
Glyma.12G231900 Glycine max HOM05D005015 ORTHO05D005696 4.3e-45 184.9 128 80.5
arahy.Tifrunner.gnm1.ann1.6U43FV Arachis hypogaea HOM05D005015 ORTHO05D005696 8.0e-44 180.6 127 81.1
Nitab4.5_0027992g0020 Nicotiana tabacum HOM05D005015 ORTHO05D005696 2.3e-43 179.1 119 82.4
Solyc00g500333.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 3.1e-43 178.7 112 85.7
TWI34G0268 Tripterygium wilfordii HOM05D005015 ORTHO05D005696 3.1e-43 178.7 129 76.7
arahy.Tifrunner.gnm1.ann1.VXR7WZ Arachis hypogaea HOM05D005015 ORTHO05D005696 2.0e-42 176.0 124 76.6
CAN.G1648.11 Capsicum annuum HOM05D000216 ORTHO05D005696 2.6e-42 175.6 118 80.5
Sed0007878 Sechium edule HOM05D005015 ORTHO05D005696 2.6e-42 175.6 115 83.5
Medtr0002s0540 Medicago truncatula HOM05D005015 ORTHO05D005696 4.4e-42 174.9 131 71.0
Nitab4.5_0005637g0090 Nicotiana tabacum HOM05D005015 ORTHO05D005696 5.8e-42 174.5 113 84.1
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 9.8e-42 173.7 118 78.8
Psat0s2754g0200 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-40 169.9 115 80.9
Psat1g003840 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-40 169.9 115 80.9
Psat6g219360 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-40 169.9 115 80.9
Medtr1g109420 Medicago truncatula HOM05D005015 ORTHO05D005696 7.0e-40 167.5 113 80.5
Gohir.A05G314033 Gossypium hirsutum HOM05D005015 ORTHO05D005696 3.5e-39 165.2 106 84.0
Gohir.D03G128101 Gossypium hirsutum HOM05D005015 ORTHO05D005696 7.8e-39 164.1 112 80.4
HanXRQChr00c0313g0573431 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-37 158.3 104 83.7
HanXRQChr04g0120711 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-37 158.3 104 83.7
HanXRQChr08g0210221 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-37 158.3 104 83.7
HanXRQChr11g0326651 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-37 158.3 104 83.7
HanXRQCPg0579841 Helianthus annuus HOM05D000743 ORTHO05D000580 4.3e-37 158.3 104 83.7
Psat0s2288g0080 Pisum sativum HOM05D000743 ORTHO05D000580 1.6e-36 156.4 144 65.3
Nitab4.5_0000435g0090 Nicotiana tabacum HOM05D005015 ORTHO05D005696 6.2e-36 154.5 98 83.7
Psat0s1586g0080 Pisum sativum HOM05D000743 ORTHO05D000580 1.4e-35 153.3 115 77.4
HanXRQChr10g0282491 Helianthus annuus HOM05D000743 ORTHO05D000580 1.8e-35 152.9 112 75.9
BraSC25t45885Z Brassica rapa HOM05D005015 ORTHO05D005696 3.1e-35 152.1 96 83.3
arahy.Tifrunner.gnm1.ann1.XNS64L Arachis hypogaea HOM05D001387 ORTHO05D005696 5.8e-34 147.9 105 78.1
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 1.3e-33 146.7 90 85.6
BraSC58t46477Z Brassica rapa HOM05D005015 ORTHO05D005696 2.9e-33 145.6 92 82.6
SEGI_04828 Sequoiadendron giganteum HOM05D005015 ORTHO05D005696 6.4e-33 144.4 132 62.1
SEGI_35208 Sequoiadendron giganteum HOM05D005015 ORTHO05D005696 6.4e-33 144.4 132 62.1
MELO3C000827.2 Cucumis melo HOM05D005015 ORTHO05D005696 2.4e-32 142.5 95 84.2
MELO3C027845.2 Cucumis melo HOM05D005015 ORTHO05D005696 2.4e-32 142.5 95 84.2
Peaxi162Scf00027g00003 Petunia axillaris HOM05D005015 ORTHO05D005696 9.2e-32 140.6 97 80.4
arahy.Tifrunner.gnm1.ann1.MI951N Arachis hypogaea HOM05D005015 ORTHO05D005696 1.9e-29 132.9 127 63.0
Gohir.A10G065880 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.2e-28 130.2 83 83.1
Solyc07g021380.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 4.0e-27 125.2 92 76.1
Migut.D01410 Erythranthe guttata HOM05D005015 ORTHO05D005696 3.4e-26 122.1 133 58.6
Lj1P433T25 Lonicera japonica HOM05D005015 ORTHO05D005696 2.2e-25 119.4 73 84.9
HanXRQChr04g0099301 Helianthus annuus HOM05D005015 ORTHO05D005696 3.7e-25 118.6 91 71.4
Lalb_Chr08g0232621 Lupinus albus HOM05D005015 ORTHO05D005696 1.9e-24 116.3 83 78.3
Gohir.D05G292450 Gossypium hirsutum HOM05D005015 ORTHO05D005696 9.2e-24 114.0 77 80.5
Solyc02g012020.3 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.2e-23 113.6 82 75.6
Gorai.009G308800 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.7e-23 112.5 76 80.3
Lsat_1_v5_gn_3_117960 Lactuca sativa HOM05D005015 ORTHO05D005696 3.9e-22 108.6 76 80.3
Gohir.A07G129651 Gossypium hirsutum HOM05D005015 ORTHO05D005696 5.1e-22 108.2 72 83.3
BraSC143t45677Z Brassica rapa HOM05D005015 ORTHO05D005696 2.5e-21 105.9 85 70.6
Gorai.002G106400 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.5e-21 105.9 76 75.0
BolSC49t61201H Brassica oleracea HOM05D005015 ORTHO05D005696 5.6e-21 104.8 77 75.3
Gohir.A07G153850 Gossypium hirsutum HOM05D005015 ORTHO05D005696 4.7e-20 101.7 71 80.3
Solyc10g044535.1 Solanum lycopersicum HOM05D005015 ORTHO05D005696 1.1e-19 100.5 132 51.5
Medtr4g071050 Medicago truncatula HOM05D005015 ORTHO05D005696 1.8e-19 99.8 71 76.1
HanXRQChr00c0272g0573041 Helianthus annuus HOM05D005015 ORTHO05D005696 6.8e-19 97.8 64 79.7
Gorai.010G147200 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.6e-18 95.9 68 76.5
Atru.chr7.976 Acer truncatum HOM05D005015 ORTHO05D005696 5.8e-18 94.7 66 75.8
MD08G1060700 Malus domestica HOM05D005015 ORTHO05D005696 5.8e-18 94.7 61 78.7
Gohir.A10G154675 Gossypium hirsutum HOM05D005015 ORTHO05D005696 9.9e-18 94.0 67 76.1
A03p46590 Brassica napus HOM05D005015 ORTHO05D005696 1.7e-17 93.2 54 87.0
BolC2t10574H Brassica oleracea HOM05D005015 ORTHO05D005696 1.7e-17 93.2 61 82.0
Gorai.011G122900 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.2e-17 92.8 72 72.2
EL10Ac5g12103 Beta vulgaris HOM05D005015 ORTHO05D005696 1.2e-15 87.0 70 72.9
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 2.1e-15 86.3 92 57.6
SEGI_03619 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 3.5e-15 85.5 64 70.3
CsaV3_UNG207830 Cucumis sativus L. HOM05D000216 ORTHO05D003638 4.6e-15 85.1 57 82.5
TPR.G15298 Trifolium pratense HOM05D005015 ORTHO05D005696 2.3e-14 82.8 61 73.8
Gohir.D06G126233 Gossypium hirsutum HOM05D005015 ORTHO05D005696 3.3e-13 79.0 51 82.4
HanXRQChr00c0300g0573221 Helianthus annuus HOM05D005015 ORTHO05D005696 3.3e-13 79.0 58 72.4
Gohir.D10G206350 Gossypium hirsutum HOM05D005015 ORTHO05D005696 2.8e-12 75.9 80 57.5
Nn020s41497 Nelumbo nucifera HOM05D005015 ORTHO05D005696 2.8e-12 75.9 58 70.7
Gohir.D10G209550 Gossypium hirsutum HOM05D005015 ORTHO05D005696 1.4e-11 73.6 48 79.2
Gorai.011G231900 Gossypium raimondii HOM05D005015 ORTHO05D005696 6.9e-11 71.2 52 75.0
SMO086G0010 Selaginella moellendorffii HOM05D005015 ORTHO05D005696 1.2e-10 70.5 129 37.2
Gorai.011G235400 Gossypium raimondii HOM05D005015 ORTHO05D005696 2.0e-10 69.7 48 77.1
Gorai.004G111300 Gossypium raimondii HOM05D000743 ORTHO05D000580 1.7e-09 66.6 83 51.8
Lj2C1238T11 Lonicera japonica HOM05D000743 ORTHO05D000580 8.4e-09 64.3 41 80.5
arahy.Tifrunner.gnm1.ann1.KLBW9T Arachis hypogaea HOM05D005015 ORTHO05D005696 9.3e-08 60.8 81 49.4
Nn1g01955 Nelumbo nucifera HOM05D005015 ORTHO05D005696 9.3e-08 60.8 38 78.9
Nn2g15007 Nelumbo nucifera HOM05D005015 ORTHO05D005696 9.3e-08 60.8 38 78.9
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-07 60.5 40 82.5


User provided reference genes

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