Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1278.5 698 100.0
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1276.2 698 99.9
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.1
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1239.2 684 99.3
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1167.5 680 95.0
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1142.1 639 99.1
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1105.1 629 98.1
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1105.1 629 98.1
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1104.7 616 99.4
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1086.6 612 99.0
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-312 1073.5 633 95.1
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.3e-295 1016.9 574 98.6
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.4e-282 976.1 549 99.3
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-199 699.9 409 100.0
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-199 699.9 409 100.0
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-174 617.1 431 89.6
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.1e-152 543.1 308 97.7
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.1e-136 491.5 747 43.4
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 6.7e-131 472.2 739 42.2
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.9e-126 456.8 733 42.0
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.3e-121 441.4 726 42.0
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.0e-120 435.6 745 41.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-112 411.0 213 96.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 6.5e-110 402.5 732 39.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-105 387.5 732 37.7
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-105 387.5 732 37.7
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-105 387.5 732 37.7
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-105 387.5 732 37.7
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-104 384.8 732 37.6
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-103 380.6 732 37.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 4.2e-101 373.2 735 38.2
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.2e-97 360.9 693 37.2
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.2e-91 339.7 632 38.0
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 2.4e-88 330.9 415 49.9
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 2.4e-88 330.9 413 49.2
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 4.6e-87 326.6 708 34.6
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 4.6e-87 326.6 708 34.6
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 5.9e-87 326.2 721 34.8
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.1e-85 322.0 747 34.9
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.9e-85 321.2 707 34.4
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 5.8e-82 309.7 646 35.6
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 5.8e-82 309.7 646 35.6
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.9e-81 306.6 162 95.7
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.4e-72 278.5 719 32.0
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.4e-72 276.6 140 99.3
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.3e-70 271.9 610 35.6
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 1.9e-69 268.1 658 34.0
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 7.8e-63 246.1 623 31.6
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 3.6e-60 237.3 398 41.2
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 9.9e-58 229.2 645 31.6
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 1.7e-54 218.4 390 38.5
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.3e-54 218.0 408 38.5
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 3.0e-54 217.6 482 31.3
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 9.6e-53 212.6 378 39.7
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 2.1e-52 211.5 397 37.8
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.8e-52 210.3 102 98.0
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 1.4e-51 208.8 391 39.1
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 2.4e-51 208.0 385 40.8
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 3.8e-49 200.7 375 35.7
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 1.9e-48 198.4 371 34.5
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 2.3e-46 191.4 208 50.5
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.8e-44 183.7 205 51.7
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-43 179.5 183 51.9
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 2.2e-41 174.9 388 35.3
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 3.8e-41 174.1 340 34.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 4.2e-40 170.6 263 39.2
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-40 169.9 131 72.5
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 9.6e-37 159.5 184 50.5
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 3.7e-36 157.5 157 56.7
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 6.5e-33 146.7 144 54.2
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.1e-32 146.0 214 42.5
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 7.4e-29 133.3 274 34.7
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 4.8e-28 130.6 346 33.2
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.8e-27 128.6 113 58.4
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 1.2e-26 125.9 95 66.3
Medtr2g039370 Medicago truncatula HOM05D001070 ORTHO05D005132 2.6e-26 124.8 131 52.7
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 6.5e-25 120.2 351 30.2
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 6.1e-23 113.6 192 40.1
Medtr6g042180 Medicago truncatula HOM05D001070 ORTHO05D005132 2.3e-22 111.7 92 59.8
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 3.9e-22 110.9 168 39.9
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.5e-21 108.2 106 55.7
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.7e-21 107.1 210 36.2
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.3e-20 105.9 128 49.2
arahy.Tifrunner.gnm1.ann1.1Y8W5R Arachis hypogaea HOM05D001070 ORTHO05D018510 2.4e-19 101.7 87 59.8
Gohir.A09G039280 Gossypium hirsutum HOM05D001070 ORTHO05D005132 6.9e-19 100.1 113 53.1
Gorai.004G219800 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.0e-18 98.6 260 31.5
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 2.0e-18 98.6 192 35.9
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-18 98.2 227 33.0
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.6e-18 98.2 86 57.0
Gohir.D11G334275 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.0e-17 96.3 113 51.3
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.7e-17 95.5 93 58.1
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.7e-17 95.5 87 59.8
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.8e-17 94.4 136 45.6
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 5.0e-17 94.0 262 31.3
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 5.0e-17 94.0 110 51.8
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 5.0e-17 94.0 140 43.6
SEGI_20187 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 8.5e-17 93.2 122 41.8
SEGI_30878 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 8.5e-17 93.2 122 41.8
SEGI_36485 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 8.5e-17 93.2 122 41.8
SEGI_27427 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.1e-16 92.8 122 41.8
SEGI_38135 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.4e-16 92.4 121 42.1
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.4e-16 89.7 232 31.9
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.1e-15 88.6 150 40.0
Gohir.D11G237240 Gossypium hirsutum HOM05D001070 ORTHO05D005132 2.7e-15 88.2 113 47.8
arahy.Tifrunner.gnm1.ann1.IUHB90 Arachis hypogaea HOM05D001070 ORTHO05D005132 5.1e-14 84.0 93 49.5
SEGI_01987 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.5e-13 82.4 143 35.7
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.0e-13 82.0 143 36.4
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.3e-12 79.3 57 66.7
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.7e-12 79.0 278 26.3
Medtr7g104140 Medicago truncatula HOM05D001070 ORTHO05D005132 2.2e-12 78.6 72 55.6
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.1e-11 76.3 141 34.0
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.3e-11 73.9 93 47.3
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.2e-10 72.8 64 57.8
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 5.9e-10 70.5 167 33.5
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.9e-10 70.5 67 52.2
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.3e-09 69.3 94 45.7
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 1.7e-09 68.9 150 38.0
Hund18411 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.0e-09 67.4 80 46.2
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.0e-09 67.4 79 51.9
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.5e-09 66.6 96 44.8
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.5e-08 65.1 104 41.3
arahy.Tifrunner.gnm1.ann1.LH3NEH Arachis hypogaea HOM05D001070 ORTHO05D005132 9.4e-08 63.2 151 33.1
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.7e-07 61.6 117 38.5
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.7e-07 60.8 167 30.5
Nitab4.5_0006502g0050 Nicotiana tabacum HOM05D001070 ORTHO05D036944 4.7e-07 60.8 119 37.0
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.1e-07 60.5 85 41.2
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 3.9e-06 57.8 200 31.5
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.8e-06 56.6 32 68.8


User provided reference genes

Program Settings