Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 5.0e-54 214.2 107 100.0
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 1.5e-18 96.3 91 60.4
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.7e-17 92.8 114 52.6
Hund30242 Selenicereus undatus HOM05D004719 ORTHO05D005519 6.7e-14 80.9 41 100.0
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.5e-13 79.7 111 49.5
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 9.6e-13 77.0 112 49.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.3e-12 76.6 95 50.5
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.6e-12 76.3 94 50.0
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 2.1e-12 75.9 103 47.6
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 8.2e-12 73.9 94 53.2
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 1.1e-11 73.6 119 42.9
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 3.1e-11 72.0 92 50.0
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 3.1e-11 72.0 92 51.1
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 4.0e-11 71.6 97 46.4
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 5.3e-11 71.2 96 49.0
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 5.3e-11 71.2 96 49.0
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 5.3e-11 71.2 114 43.9
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 9.0e-11 70.5 93 50.5
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.2e-10 70.1 91 46.2
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 1.2e-10 70.1 108 45.4
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.2e-10 70.1 94 44.7
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.5e-10 69.7 99 48.5
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 1.5e-10 69.7 99 48.5
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 2.0e-10 69.3 90 51.1
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 2.6e-10 68.9 92 46.7
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 4.5e-10 68.2 91 48.4
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 4.5e-10 68.2 90 50.0
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.0e-09 67.0 94 45.7
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.3e-09 66.6 100 45.0
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.3e-09 66.6 100 45.0
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.3e-09 66.6 100 45.0
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.7e-09 66.2 91 44.0
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.2e-09 65.9 104 45.2
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 2.9e-09 65.5 101 44.6
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 3.8e-09 65.1 95 46.3
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 4.9e-09 64.7 94 45.7
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 4.9e-09 64.7 103 46.6
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 6.5e-09 64.3 91 48.4
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 6.5e-09 64.3 93 49.5
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 6.5e-09 64.3 95 46.3
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 1.9e-08 62.8 94 46.8
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.9e-08 62.8 91 42.9
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 1.9e-08 62.8 99 43.4
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 3.2e-08 62.0 94 43.6
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.2e-08 61.6 94 43.6
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 5.5e-08 61.2 98 45.9
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 5.5e-08 61.2 97 42.3
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 7.1e-08 60.8 100 43.0
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 1.2e-07 60.1 114 40.4
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 1.2e-07 60.1 114 40.4
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 1.6e-07 59.7 89 46.1
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 2.1e-07 59.3 89 46.1
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 2.1e-07 59.3 89 46.1
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 2.1e-07 59.3 89 44.9
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 3.5e-07 58.5 98 41.8
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 6.0e-07 57.8 96 41.7
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 6.0e-07 57.8 102 42.2
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 6.0e-07 57.8 74 43.2
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 7.9e-07 57.4 58 60.3
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 1.0e-06 57.0 69 55.1
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.3e-06 56.6 51 58.8
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 1.8e-06 56.2 109 44.0
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.8e-06 56.2 102 42.2
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.8e-06 56.2 88 42.0
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 1.8e-06 56.2 88 42.0
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.8e-06 56.2 108 39.8
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 2.3e-06 55.8 64 51.6
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.3e-06 55.8 95 41.1
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 3.0e-06 55.5 100 44.0
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 3.0e-06 55.5 100 41.0
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 3.9e-06 55.1 89 44.9
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 3.9e-06 55.1 96 40.6
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 8.7e-06 53.9 100 39.0


User provided reference genes

Program Settings