Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1193.7 651 100.0
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.4
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 680 95.1
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1169.1 676 95.6
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1167.1 680 95.0
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 8.9e-312 1072.8 632 95.1
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.1e-303 1044.6 617 95.1
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.4e-300 1035.8 622 94.1
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.4e-300 1035.8 622 94.1
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-295 1018.5 574 98.8
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.2e-295 1017.3 605 94.9
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.6e-283 977.6 549 99.5
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.7e-280 967.6 616 89.8
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-199 699.9 409 100.0
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.8e-199 699.9 409 100.0
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.0e-154 548.1 424 83.5
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.9e-152 543.1 308 97.7
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.9e-119 434.1 705 41.3
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 4.5e-113 412.9 676 40.2
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.7e-112 411.0 213 96.7
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.0e-110 402.1 691 39.9
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.5e-105 386.7 684 39.9
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.7e-102 377.1 700 39.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.7e-94 350.5 669 38.0
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-91 341.7 673 37.0
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-91 341.7 673 37.0
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-91 341.7 673 37.0
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.3e-91 341.7 673 37.0
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 8.3e-91 339.0 673 36.8
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.4e-90 338.2 632 38.0
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 2.0e-89 334.3 673 36.4
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.7e-89 334.0 665 36.5
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.6e-86 323.6 676 36.8
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 2.0e-81 307.8 647 35.9
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 2.0e-81 307.8 647 35.9
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.5e-81 306.6 162 95.7
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 1.4e-74 285.0 652 33.6
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 3.2e-74 283.9 654 32.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 3.2e-74 283.9 654 32.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.0e-72 278.9 687 33.3
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-72 278.5 653 32.6
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 2.5e-71 274.2 396 44.7
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 2.5e-71 274.2 394 44.2
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 1.2e-62 245.4 623 31.6
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.2e-62 245.4 672 31.1
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.1e-61 242.3 603 33.8
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 1.6e-57 228.4 645 31.6
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 3.0e-56 224.2 614 31.6
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 2.1e-54 218.0 390 38.5
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 4.7e-54 216.9 482 31.3
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-52 212.2 102 99.0
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.5e-52 211.8 378 39.7
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-52 211.1 397 37.8
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 3.8e-51 207.2 385 40.8
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 6.0e-49 199.9 375 35.7
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 3.0e-48 197.6 371 34.5
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 8.7e-48 196.1 335 39.7
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 6.0e-41 173.3 340 34.4
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 5.1e-40 170.2 263 39.2
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.6e-40 169.9 131 72.5
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 1.5e-39 168.7 349 35.8
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.5e-39 168.7 123 72.4
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 1.6e-38 165.2 347 35.4
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 9.0e-37 159.5 184 50.5
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 5.8e-36 156.8 157 56.7
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 4.0e-29 134.0 194 41.8
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.3e-29 133.7 274 34.7
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 9.0e-29 132.9 334 32.0
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-29 132.9 123 52.8
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.6e-28 129.8 144 47.9
Medtr2g039370 Medicago truncatula HOM05D001070 ORTHO05D005132 4.2e-26 124.0 131 52.7
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 7.1e-26 123.2 195 40.5
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 7.1e-26 123.2 175 44.0
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 5.6e-23 113.6 192 40.1
Medtr6g042180 Medicago truncatula HOM05D001070 ORTHO05D005132 3.7e-22 110.9 92 59.8
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 9.0e-21 106.3 210 36.2
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 5.8e-20 103.6 299 29.4
arahy.Tifrunner.gnm1.ann1.1Y8W5R Arachis hypogaea HOM05D001070 ORTHO05D018510 2.9e-19 101.3 87 59.8
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 4.9e-19 100.5 87 54.0
Gohir.A09G039280 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.1e-18 99.4 113 53.1
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 2.5e-18 98.2 227 33.0
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 2.5e-18 98.2 192 35.9
Gorai.004G219800 Gossypium raimondii HOM05D001070 ORTHO05D005132 3.2e-18 97.8 260 31.5
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 4.2e-18 97.4 104 47.1
Gohir.D11G334275 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.6e-17 95.5 113 51.3
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 4.6e-17 94.0 262 31.3
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 4.6e-17 94.0 140 43.6
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.6e-17 94.0 133 46.6
SEGI_20187 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.3e-16 92.4 122 41.8
SEGI_30878 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.3e-16 92.4 122 41.8
SEGI_36485 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.3e-16 92.4 122 41.8
SEGI_27427 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.8e-16 92.0 122 41.8
SEGI_38135 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.8e-16 92.0 121 42.1
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.7e-16 89.7 232 31.9
Gohir.D11G237240 Gossypium hirsutum HOM05D001070 ORTHO05D005132 4.3e-15 87.4 113 47.8
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.3e-15 87.4 150 40.0
arahy.Tifrunner.gnm1.ann1.IUHB90 Arachis hypogaea HOM05D001070 ORTHO05D005132 8.2e-14 83.2 93 49.5
SEGI_01987 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.8e-13 82.0 143 35.7
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.8e-13 82.0 143 36.4
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.5e-12 79.0 278 26.3
Medtr7g104140 Medicago truncatula HOM05D001070 ORTHO05D005132 2.0e-12 78.6 72 55.6
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.0e-11 76.3 141 34.0
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.0e-11 76.3 69 52.2
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.2e-11 75.1 104 40.4
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.0e-11 73.9 93 47.3
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.1e-10 72.8 64 57.8
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 5.5e-10 70.5 167 33.5
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.2e-09 69.3 94 45.7
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 1.6e-09 68.9 150 38.0
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 2.7e-09 68.2 75 48.0
Hund18411 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.6e-09 67.4 80 46.2
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 7.9e-09 66.6 96 44.8
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.3e-08 65.1 104 41.3
arahy.Tifrunner.gnm1.ann1.LH3NEH Arachis hypogaea HOM05D001070 ORTHO05D005132 8.8e-08 63.2 151 33.1
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.0e-07 62.0 76 43.4
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.5e-07 61.6 117 38.5
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.3e-07 60.8 167 30.5
Nitab4.5_0006502g0050 Nicotiana tabacum HOM05D001070 ORTHO05D036944 4.3e-07 60.8 119 37.0
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 9.7e-07 59.7 39 66.7
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.7e-07 59.7 39 66.7
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.7e-07 59.7 85 41.2
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.8e-06 58.2 97 37.1
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 3.7e-06 57.8 200 31.5
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.2e-06 56.6 32 68.8


User provided reference genes

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