Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.9e-282 974.5 490 100.0
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-233 812.8 513 84.4
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.8e-231 805.8 513 84.0
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.1e-228 794.7 513 83.2
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-227 793.1 513 83.0
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.6e-226 787.3 513 82.7
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.8e-223 777.3 495 84.0
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.2e-220 768.5 510 80.8
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.8e-216 755.4 513 80.1
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.4e-214 748.4 513 79.5
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 7.6e-190 667.5 508 72.0
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 9.7e-177 624.0 517 68.5
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 3.9e-170 602.1 511 67.1
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.0e-167 591.3 409 79.5
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 3.0e-162 575.9 517 64.0
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 2.0e-158 563.1 513 63.2
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 3.5e-158 562.4 519 60.3
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 5.0e-157 558.5 518 61.8
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.2e-155 553.9 514 63.0
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-151 540.0 523 61.2
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.8e-151 540.0 523 61.2
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 7.0e-151 538.1 522 60.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.7e-147 525.4 490 61.4
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 4.0e-146 522.3 518 59.7
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 8.8e-146 521.2 522 57.5
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 2.7e-142 509.6 511 57.7
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.8e-138 496.9 505 57.4
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 2.6e-137 493.0 509 59.5
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 2.2e-136 490.0 520 55.8
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 1.8e-135 486.9 513 56.1
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 9.5e-132 474.6 514 56.6
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 3.6e-131 472.6 504 55.4
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 4.0e-130 469.2 511 54.2
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 6.8e-130 468.4 511 54.2
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 3.4e-129 466.1 511 53.8
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-129 466.1 517 56.5
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-129 466.1 517 56.5
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-129 466.1 517 56.5
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-129 466.1 517 56.5
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 3.4e-129 466.1 517 56.5
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 5.8e-129 465.3 488 58.8
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 7.5e-129 464.9 511 54.4
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 6.0e-126 455.3 517 55.1
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 7.8e-126 454.9 444 60.1
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.7e-125 453.8 464 58.4
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.0e-125 453.0 387 65.4
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 7.3e-124 448.4 460 58.5
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.0e-121 440.3 467 56.5
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 9.8e-121 438.0 520 53.1
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 1.1e-116 424.5 516 50.6
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.0e-113 413.7 388 61.1
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 3.4e-113 412.9 497 51.7
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 1.4e-111 407.5 477 52.2
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 1.6e-102 377.5 370 57.3
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 2.1e-102 377.1 387 55.8
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.3e-101 374.4 347 62.5
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 2.3e-101 373.6 527 47.2
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.0e-98 361.7 494 49.8
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 9.0e-98 361.7 440 52.3
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.4e-96 355.5 282 71.3
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 6.0e-94 349.0 342 59.1
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 7.4e-92 342.0 303 64.4
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 2.2e-88 330.5 455 48.8
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 7.6e-73 278.9 282 59.2
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-72 278.1 277 58.5
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.9e-72 276.9 374 51.1
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 5.0e-72 276.2 271 59.8
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 1.1e-71 275.0 233 63.5
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.4e-65 253.4 308 50.0
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 1.8e-58 231.1 309 46.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 1.8e-58 231.1 309 46.9
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 8.5e-56 222.2 248 52.4
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 1.9e-55 221.1 353 45.0
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 2.6e-52 210.7 277 46.2
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 9.7e-52 208.8 188 64.4
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 4.8e-51 206.5 161 71.4
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 1.6e-49 201.4 213 52.1
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 1.6e-49 201.4 213 52.1
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 1.6e-49 201.4 213 52.1
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 1.6e-49 201.4 213 52.1
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 1.6e-49 201.4 213 52.1
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-48 198.7 198 58.6
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 3.2e-47 193.7 183 59.6
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 8.8e-45 185.7 219 53.9
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 1.3e-43 181.8 124 78.2
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.5e-41 173.3 170 59.4
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 9.4e-39 165.6 121 73.6
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.7e-38 164.1 234 44.0
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 1.8e-37 161.4 135 66.7
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 5.2e-37 159.8 159 59.1
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 9.8e-36 155.6 156 57.1
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 5.4e-34 149.8 138 68.1
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 2.7e-33 147.5 159 56.0
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-31 140.6 135 64.4
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 9.5e-31 139.0 222 43.2
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 2.3e-29 134.4 145 55.9
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.0e-28 131.3 86 79.1
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.4e-28 130.2 93 75.3
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 9.8e-28 129.0 141 58.2
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.8e-28 129.0 94 74.5
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 2.2e-27 127.9 106 62.3
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 3.7e-27 127.1 144 56.2
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.4e-26 124.4 123 61.8
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.0e-25 121.3 93 72.0
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 4.5e-25 120.2 98 64.3
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 5.9e-25 119.8 110 60.9
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 1.3e-24 118.6 106 52.8
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.9e-24 117.5 492 29.5
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 3.8e-24 117.1 125 57.6
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 5.0e-24 116.7 86 67.4
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 8.6e-24 115.9 91 59.3
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 2.5e-23 114.4 99 56.6
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 2.8e-22 110.9 82 64.6
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.8e-22 110.9 66 81.8
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.6e-22 110.5 166 46.4
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 6.1e-22 109.8 76 80.3
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 5.2e-21 106.7 174 44.8
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.2e-20 105.5 130 46.2
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 2.6e-20 104.4 135 47.4
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.2e-19 101.3 74 64.9
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 4.9e-19 100.1 84 71.4
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 3.2e-18 97.4 102 53.9
Nn3g16148 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.6e-17 93.6 78 64.1
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 5.9e-17 93.2 87 62.1
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 3.0e-16 90.9 122 49.2
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.6e-14 84.0 389 26.5
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 4.7e-14 83.6 65 67.7
FAN24G2630 Fragaria x ananassa HOM05D004473 ORTHO05D005652 2.3e-13 81.3 84 52.4
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 5.2e-13 80.1 109 49.5
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 6.8e-13 79.7 124 42.7
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 5.8e-12 76.6 82 50.0
Os11g0517350 Oryza sativa ssp. japonica HOM05D004473 ORTHO05D005652 4.9e-11 73.6 60 58.3
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 1.1e-10 72.4 59 59.3
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.1e-10 70.5 56 64.3
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.1e-10 70.5 56 64.3
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 2.7e-09 67.8 54 63.0
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 4.6e-09 67.0 89 47.2
BraSC58t46474Z Brassica rapa HOM05D004473 ORTHO05D005652 1.7e-08 65.1 49 53.1
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 6.6e-08 63.2 49 71.4
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 1.9e-07 61.6 56 57.1
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 4.3e-07 60.5 42 78.6
TPR.G7920 Trifolium pratense HOM05D004473 ORTHO05D005652 7.3e-07 59.7 64 60.9
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 9.5e-07 59.3 88 47.7
CSS0010292 Camellia sinensis var. sinensis HOM05D004473 ORTHO05D005652 2.1e-06 58.2 34 76.5
Lalb_Chr07g0192631 Lupinus albus HOM05D004473 ORTHO05D005652 4.7e-06 57.0 54 50.0
Gorai.006G008300 Gossypium raimondii HOM05D004473 ORTHO05D005652 6.2e-06 56.6 95 37.9


User provided reference genes

Program Settings