Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 5.2e-41 170.6 87 100.0
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 5.2e-41 170.6 87 100.0
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 2.7e-29 131.7 83 74.7
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 5.6e-27 124.0 80 71.2
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 2.9e-23 111.7 123 49.6
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 2.8e-18 95.1 113 46.0
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 4.7e-18 94.4 123 42.3
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 6.2e-18 94.0 125 40.8
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 8.1e-18 93.6 123 42.3
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 1.4e-17 92.8 123 41.5
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 1.4e-17 92.8 123 41.5
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 3.1e-17 91.7 123 40.7
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 4.0e-17 91.3 110 43.6
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 5.2e-17 90.9 68 61.8
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 6.8e-17 90.5 123 40.7
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 6.8e-17 90.5 78 56.4
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 6.8e-17 90.5 123 41.5
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 1.2e-16 89.7 126 40.5
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 2.0e-16 89.0 68 63.2
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 2.0e-16 89.0 64 64.1
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.6e-16 88.6 68 60.3
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 3.4e-16 88.2 126 38.1
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 3.4e-16 88.2 123 39.8
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 3.4e-16 88.2 123 40.7
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.4e-16 87.8 123 40.7
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 4.4e-16 87.8 68 57.4
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 4.4e-16 87.8 68 60.3
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 4.4e-16 87.8 123 40.7
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 9.9e-16 86.7 68 60.3
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.3e-15 86.3 123 39.0
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.3e-15 86.3 112 42.0
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 1.3e-15 86.3 112 42.0
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 1.3e-15 86.3 122 39.3
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 1.3e-15 86.3 68 60.3
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.3e-15 86.3 123 40.7
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 1.7e-15 85.9 112 42.9
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 1.7e-15 85.9 68 57.4
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 2.9e-15 85.1 123 40.7
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 3.8e-15 84.7 122 37.7
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 3.8e-15 84.7 68 57.4
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.9e-15 84.3 122 37.7
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 4.9e-15 84.3 68 58.8
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 8.4e-15 83.6 123 37.4
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 8.4e-15 83.6 122 40.2
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 1.1e-14 83.2 68 61.8
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 1.1e-14 83.2 122 37.7
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 1.1e-14 83.2 121 39.7
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 1.1e-14 83.2 123 41.5
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.4e-14 82.8 123 39.8
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 1.9e-14 82.4 123 37.4
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 1.9e-14 82.4 68 52.9
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 1.9e-14 82.4 68 52.9
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 1.9e-14 82.4 122 36.9
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 2.4e-14 82.0 122 36.9
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 2.4e-14 82.0 122 42.6
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 2.4e-14 82.0 122 40.2
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 2.4e-14 82.0 122 40.2
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 2.4e-14 82.0 123 38.2
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 3.2e-14 81.6 68 52.9
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 3.2e-14 81.6 68 52.9
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 3.2e-14 81.6 68 52.9
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 4.2e-14 81.3 123 36.6
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 4.2e-14 81.3 68 57.4
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 5.4e-14 80.9 119 38.7
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 5.4e-14 80.9 122 41.8
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 7.1e-14 80.5 68 54.4
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 7.1e-14 80.5 121 40.5
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 7.1e-14 80.5 121 40.5
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 7.1e-14 80.5 123 35.8
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 9.2e-14 80.1 112 42.9
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 1.2e-13 79.7 66 56.1
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 1.2e-13 79.7 68 52.9
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.1e-13 79.0 123 39.0
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 2.7e-13 78.6 123 36.6
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 2.7e-13 78.6 68 54.4
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 3.5e-13 78.2 68 54.4
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 6.0e-13 77.4 68 51.5
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 7.8e-13 77.0 123 38.2
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 3.0e-12 75.1 123 35.8
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 8.7e-12 73.6 70 48.6
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 8.7e-12 73.6 70 52.9
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 1.9e-11 72.4 99 37.4
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 3.3e-11 71.6 121 33.9
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.1e-10 68.9 123 32.5
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 2.8e-10 68.6 112 34.8
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 4.8e-10 67.8 103 33.0
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 6.2e-10 67.4 99 34.3
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 8.1e-10 67.0 115 33.0
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 3.1e-09 65.1 100 33.0
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 3.1e-09 65.1 68 44.1
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 3.1e-09 65.1 112 33.9
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 6.9e-09 63.9 100 32.0
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 6.9e-09 63.9 58 56.9
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 1.5e-08 62.8 55 49.1
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 2.6e-08 62.0 64 45.3
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 2.6e-08 62.0 64 45.3
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 4.4e-08 61.2 59 45.8
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 1.1e-06 56.6 55 43.6


User provided reference genes

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