Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1255.7 691 100.0
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1191.8 657 99.8
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.7
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1117.4 627 98.9
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1108.2 629 98.3
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1107.8 613 99.8
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1106.3 629 98.1
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1098.2 610 99.8
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1094.3 604 99.8
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.0e-301 1039.6 620 94.4
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.8e-301 1036.9 622 94.1
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.9e-297 1023.8 581 98.5
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.7e-200 701.4 410 99.8
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.7e-200 701.4 410 99.8
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.2e-178 628.2 429 90.7
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 5.7e-175 618.6 338 99.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-135 486.5 243 99.6
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.2e-108 398.3 684 40.4
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.0e-104 382.1 192 99.5
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 7.9e-100 369.0 700 37.9
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.2e-97 359.0 658 38.9
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 5.9e-95 352.8 679 38.3
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.6e-92 343.6 651 38.9
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 4.1e-88 330.1 393 50.9
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 5.3e-88 329.7 391 50.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 6.1e-84 316.2 689 35.3
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-77 293.5 677 34.7
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-77 293.5 677 34.7
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-77 293.5 677 34.7
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-77 293.5 677 34.7
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-76 290.8 677 34.6
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 8.0e-76 289.3 662 35.6
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 6.7e-75 286.2 677 34.1
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.9e-71 273.1 624 34.3
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.7e-70 271.6 610 35.6
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 4.2e-69 266.9 623 34.5
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 8.3e-65 252.7 649 32.5
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 3.1e-64 250.8 634 32.5
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 3.1e-64 250.8 634 32.5
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-62 245.4 633 32.2
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.3e-62 245.4 587 33.6
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.2e-61 239.6 126 96.0
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 6.1e-60 236.5 383 41.8
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.2e-58 232.3 666 31.7
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.9e-54 217.6 384 39.6
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-53 215.3 604 31.8
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-53 215.3 604 31.8
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.2e-52 212.2 102 99.0
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 3.1e-51 207.6 367 39.5
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.5e-50 205.3 755 27.9
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 5.6e-45 186.8 199 52.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.7e-44 183.7 183 54.6
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 4.4e-42 177.2 170 53.5
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-41 175.6 387 35.4
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.0e-40 169.9 131 72.5
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 9.2e-40 169.5 550 28.7
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 1.1e-32 146.0 581 27.5
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.4e-32 145.6 214 42.5
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.4e-32 145.6 144 54.2
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 3.5e-31 141.0 409 27.4
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.6e-29 133.7 274 34.7
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 4.7e-28 130.6 314 33.4
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 1.2e-26 125.9 95 66.3
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-26 125.6 347 31.7
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.5e-26 125.6 97 62.9
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 2.6e-26 124.8 336 34.8
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 4.4e-26 124.0 302 31.5
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 7.6e-26 123.2 175 44.0
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 2.9e-25 121.3 298 29.9
Hund29439 Selenicereus undatus HOM05D001070 ORTHO05D010350 6.4e-25 120.2 69 94.2
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 6.4e-25 120.2 351 30.2
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 1.9e-24 118.6 354 31.1
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 6.0e-23 113.6 192 40.1
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 7.3e-21 106.7 96 55.2
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 9.6e-21 106.3 91 54.9
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.1e-20 105.1 91 59.3
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.6e-18 98.2 86 57.0
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 5.8e-18 97.1 267 29.2
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.3e-17 95.9 93 58.1
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 4.9e-17 94.0 262 31.3
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.9e-17 94.0 133 46.6
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.4e-17 93.2 154 42.9
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 8.4e-17 93.2 81 61.7
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-16 92.8 139 41.0
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.1e-16 92.8 200 33.0
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.3e-16 89.7 232 31.9
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 9.3e-16 89.7 209 32.5
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.6e-15 87.4 150 40.0
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 5.1e-14 84.0 221 32.6
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.9e-13 82.0 143 36.4
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.3e-12 79.3 57 66.7
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.6e-12 79.0 278 26.3
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.1e-11 76.3 141 34.0
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.3e-11 73.9 93 47.3
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.2e-10 72.8 64 57.8
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.8e-10 70.5 67 52.2
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 9.9e-10 69.7 91 47.3
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.3e-09 69.3 94 45.7
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.7e-09 68.9 35 97.1
Hund18411 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.9e-09 67.4 80 46.2
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.4e-09 66.6 96 44.8
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.9e-08 65.5 72 52.8
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.4e-08 65.1 104 41.3
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 7.1e-08 63.5 142 35.2
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 1.6e-07 62.4 143 34.3
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.7e-07 61.6 117 38.5
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.6e-07 60.8 167 30.5
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 7.9e-07 60.1 126 34.1
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.0e-06 59.7 85 41.2
Nitab4.5_0006502g0050 Nicotiana tabacum HOM05D001070 ORTHO05D036944 1.8e-06 58.9 119 37.0
Medtr1g037160 Medicago truncatula HOM05D001070 ORTHO05D005132 3.0e-06 58.2 58 58.6
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 3.9e-06 57.8 200 31.5
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 6.7e-06 57.0 52 57.7
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 6.7e-06 57.0 52 57.7
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.7e-06 56.6 32 68.8


User provided reference genes

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