Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1114.8 617 100.0
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.7
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1099.0 610 99.8
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 605 99.8
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1089.7 612 99.2
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1087.8 612 99.0
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-296 1021.5 612 94.3
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-295 1018.5 605 94.9
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.8e-290 1001.5 557 99.8
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-274 948.7 531 99.8
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-194 682.9 402 99.8
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.2e-194 682.9 402 99.8
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-178 628.2 429 90.7
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.5e-147 526.2 291 99.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.7e-107 393.7 196 99.5
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.6e-104 384.4 651 40.9
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.6e-96 357.8 655 38.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 5.8e-94 349.4 653 38.9
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.8e-94 349.4 652 38.7
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.9e-89 334.3 645 38.6
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 3.6e-88 330.1 393 50.9
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 4.8e-88 329.7 391 50.4
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.8e-80 303.9 646 36.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-76 290.0 650 35.2
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-76 290.0 650 35.2
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-76 290.0 650 35.2
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-76 290.0 650 35.2
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-76 289.3 145 99.3
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-75 287.3 650 35.1
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.7e-75 287.3 633 36.5
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 5.1e-74 283.1 650 34.6
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.5e-70 271.6 610 35.6
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.5e-68 264.2 616 33.9
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 2.1e-67 261.2 620 34.4
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 2.1e-64 251.1 631 33.0
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 6.3e-64 249.6 633 32.4
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 6.3e-64 249.6 633 32.4
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 2.6e-62 244.2 632 32.1
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.5e-61 239.6 126 96.0
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 5.5e-60 236.5 383 41.8
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 9.3e-60 235.7 557 33.8
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 2.3e-58 231.1 658 31.9
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.6e-54 217.6 384 39.6
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.1e-52 212.2 102 99.0
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-52 211.8 577 32.2
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 1.4e-52 211.8 577 32.2
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 2.7e-51 207.6 367 39.5
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 3.3e-49 200.7 627 29.7
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 5.0e-45 186.8 199 52.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.2e-44 183.7 183 54.6
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 3.9e-42 177.2 170 53.5
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 1.1e-41 175.6 387 35.4
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.3e-40 169.9 131 72.5
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 1.8e-39 168.3 549 28.6
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.3e-32 145.6 214 42.5
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.3e-32 145.6 144 54.2
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 2.2e-32 144.8 572 27.8
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 9.1e-31 139.4 408 27.2
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.0e-29 133.7 274 34.7
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 1.0e-26 125.9 95 66.3
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.4e-26 125.6 97 62.9
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 6.8e-26 123.2 175 44.0
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 1.2e-25 122.5 301 31.2
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 1.2e-25 122.5 307 36.5
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-25 122.1 320 32.5
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 2.0e-25 121.7 305 33.1
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 5.7e-25 120.2 297 29.6
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 5.7e-25 120.2 351 30.2
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-23 115.2 327 31.8
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 5.4e-23 113.6 192 40.1
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 6.5e-21 106.7 96 55.2
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 8.5e-21 106.3 91 54.9
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.9e-20 105.1 91 59.3
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.3e-18 98.2 86 57.0
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 1.2e-17 95.9 266 28.9
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.2e-17 95.9 93 58.1
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 4.4e-17 94.0 262 31.3
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.4e-17 94.0 133 46.6
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 7.5e-17 93.2 154 42.9
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 7.5e-17 93.2 81 61.7
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 8.3e-16 89.7 232 31.9
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 2.4e-15 88.2 194 32.5
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.1e-15 87.4 150 40.0
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 7.0e-15 86.7 126 41.3
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 7.0e-15 86.7 201 33.3
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.7e-13 82.0 143 36.4
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.1e-12 79.3 57 66.7
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.5e-12 79.0 278 26.3
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 9.5e-12 76.3 141 34.0
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 4.7e-11 73.9 93 47.3
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.0e-10 72.8 64 57.8
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 4.0e-10 70.9 143 37.1
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.2e-10 70.5 67 52.2
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.2e-09 69.3 94 45.7
Hund18411 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.4e-09 67.4 80 46.2
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.8e-09 66.2 96 44.8
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.7e-08 65.5 72 52.8
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.2e-08 65.1 104 41.3
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.4e-07 61.6 117 38.5
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 4.1e-07 60.8 82 47.6
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 4.1e-07 60.8 167 30.5
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.2e-07 59.7 85 41.2
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 1.2e-06 59.3 124 33.9
Medtr1g037160 Medicago truncatula HOM05D001070 ORTHO05D005132 2.7e-06 58.2 58 58.6
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 3.5e-06 57.8 200 31.5
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 7.8e-06 56.6 32 68.8


User provided reference genes

Program Settings