Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1105.9 611 100.0
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 0.0e+00 1076.6 633 95.3
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.2e-312 1074.7 633 95.1
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.9e-303 1044.6 619 94.7
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.1e-302 1040.8 620 94.4
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.1e-302 1040.8 620 94.4
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.3
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 7.1e-302 1040.0 619 94.5
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.4e-296 1021.1 612 94.3
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.0e-280 968.8 616 89.8
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.5e-275 952.6 565 94.5
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.5e-259 898.7 538 94.4
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.7e-181 638.6 413 92.7
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.7e-181 638.6 413 92.7
Hund28853 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.9e-155 551.2 431 82.8
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.4e-132 476.9 299 89.6
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.9e-114 416.8 237 94.5
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.3e-98 364.8 672 39.7
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.4e-92 344.7 674 37.4
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.7e-90 337.8 632 38.9
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.8e-88 330.5 667 37.2
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.1e-84 318.5 672 36.9
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.9e-81 307.8 153 99.3
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 6.8e-79 299.3 386 49.0
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 8.9e-79 298.9 386 49.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.9e-77 293.1 647 35.9
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-72 278.5 645 34.9
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-72 278.5 645 34.9
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-72 278.5 645 34.9
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-72 278.5 645 34.9
Hund28589 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.2e-72 276.2 140 99.3
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 8.1e-72 275.8 645 34.7
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-70 271.6 645 34.3
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.2e-67 261.9 663 34.4
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 2.4e-63 247.7 603 34.2
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.4e-62 243.4 628 32.6
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 2.9e-61 240.7 654 33.2
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 9.6e-57 225.7 641 31.4
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 2.4e-55 221.1 632 30.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 2.4e-55 221.1 632 30.9
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 4.4e-54 216.9 631 30.6
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 9.9e-54 215.7 565 32.2
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 2.2e-53 214.5 381 40.4
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 6.4e-53 213.0 661 31.3
Hund31094 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.1e-52 212.2 102 99.0
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 3.3e-49 200.7 559 32.0
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 3.3e-49 200.7 559 32.0
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.1e-48 198.0 375 38.4
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 3.4e-46 190.7 208 50.5
Lj2P1238T100 Lonicera japonica HOM05D001070 ORTHO05D005132 1.7e-45 188.3 372 38.7
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 3.8e-45 187.2 634 29.5
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 9.3e-44 182.6 205 51.7
HanXRQChr08g0222871 Helianthus annuus HOM05D001070 ORTHO05D005132 5.1e-42 176.8 183 51.4
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-34 152.1 387 33.3
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 1.9e-33 148.3 556 28.2
ClCG11G009250 Citrullus lanatus HOM05D001070 ORTHO05D005132 1.3e-32 145.6 214 42.5
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 1.3e-32 145.6 144 54.2
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 2.4e-31 141.4 547 26.9
MBI10_g47595_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.6e-27 128.6 113 58.4
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 2.7e-27 127.9 345 32.8
Potri.005G150450 Populus trichocarpa HOM05D001070 ORTHO05D005132 1.0e-26 125.9 95 66.3
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 6.9e-23 113.2 408 26.5
Hund20483 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.0e-23 112.8 99 66.7
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 2.6e-22 111.3 303 32.3
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.6e-22 111.3 336 30.1
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 3.4e-22 110.9 302 32.1
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 4.5e-22 110.5 157 40.8
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.3e-21 109.0 241 33.6
MBI09_g14156_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.2e-21 108.2 106 55.7
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.1e-20 105.9 128 49.2
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 4.2e-20 104.0 309 31.4
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 4.2e-20 104.0 308 34.7
MBI08_g37092_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 2.3e-18 98.2 86 57.0
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 1.5e-17 95.5 299 28.1
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.5e-17 95.5 93 58.1
MBI08_g41352_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D005132 1.5e-17 95.5 87 59.8
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 4.3e-17 94.0 297 28.6
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.3e-17 94.0 133 46.6
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 5.7e-17 93.6 172 33.7
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 7.4e-17 93.2 200 33.0
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 9.7e-17 92.8 154 42.9
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 9.7e-17 92.8 178 37.6
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 1.3e-16 92.4 131 42.7
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 6.3e-16 90.1 209 32.5
Solyc02g011820.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.1e-15 87.4 150 40.0
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.1e-12 79.3 57 66.7
Hund18411 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.7e-11 74.7 162 34.6
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 4.7e-11 73.9 93 47.3
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 3.0e-10 71.2 143 37.1
Solyc02g011830.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.1e-10 70.5 67 52.2
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 6.7e-10 70.1 94 45.7
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 1.1e-09 69.3 94 45.7
Solyc01g009550.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.4e-09 67.4 79 51.9
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 7.4e-09 66.6 96 44.8
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-08 65.9 259 27.4
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 2.2e-08 65.1 104 41.3
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 2.8e-08 64.7 113 38.1
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 6.3e-08 63.5 205 30.2
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.4e-07 62.4 132 32.6
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.4e-07 61.6 117 38.5
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 7.0e-07 60.1 126 34.1
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.1e-07 59.7 117 35.0
Solyc10g047390.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 9.1e-07 59.7 85 41.2
Gorai.012G102100 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.6e-06 58.2 164 30.5
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 7.7e-06 56.6 32 68.8


User provided reference genes

Program Settings