Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.9e-114 415.2 210 100.0
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 2.9e-114 415.2 210 100.0
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 3.1e-47 192.6 211 56.9
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 9.9e-46 187.6 215 54.9
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 2.7e-43 179.5 208 51.0
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 4.6e-43 178.7 208 52.9
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.3e-40 170.6 204 50.0
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.1e-40 169.9 208 51.0
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 3.7e-40 169.1 209 50.7
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 8.1e-40 167.9 209 50.2
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.4e-39 167.2 209 50.2
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 2.0e-38 163.3 208 48.6
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 4.5e-38 162.2 209 48.8
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 1.0e-37 161.0 212 49.1
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 1.3e-37 160.6 209 48.8
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 1.3e-37 160.6 211 47.4
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 1.7e-37 160.2 209 48.3
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 4.9e-37 158.7 209 48.3
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 6.5e-37 158.3 209 47.4
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.9e-36 156.8 210 48.6
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.9e-36 156.8 211 45.0
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 3.2e-36 156.0 185 50.3
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 4.2e-36 155.6 209 48.8
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 7.1e-36 154.8 213 46.5
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 7.1e-36 154.8 229 45.9
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 1.2e-35 154.1 199 48.2
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.2e-35 154.1 209 46.9
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.6e-35 153.7 209 47.8
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 1.6e-35 153.7 211 44.1
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 2.7e-35 152.9 256 44.1
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 2.7e-35 152.9 212 48.6
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 2.7e-35 152.9 202 48.0
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 3.5e-35 152.5 201 48.8
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 4.6e-35 152.1 209 46.9
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.0e-34 151.0 212 47.2
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 1.0e-34 151.0 205 47.8
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.0e-34 151.0 194 45.9
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.3e-34 149.8 231 45.0
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 2.3e-34 149.8 215 44.7
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 2.3e-34 149.8 202 47.0
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 3.0e-34 149.4 217 45.2
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 3.9e-34 149.1 207 45.4
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 6.7e-34 148.3 218 44.0
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.1e-33 147.5 208 46.6
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.1e-33 147.5 206 46.6
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.9e-33 146.7 207 44.9
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 2.5e-33 146.4 210 47.1
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 5.7e-33 145.2 216 43.5
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 7.4e-33 144.8 208 46.2
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 9.6e-33 144.4 205 44.4
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.6e-32 143.7 208 45.2
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 2.1e-32 143.3 173 49.1
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 2.8e-32 142.9 204 45.1
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.8e-32 142.1 215 44.7
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 6.2e-32 141.7 199 44.7
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 8.2e-32 141.4 200 45.0
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.1e-31 141.0 201 44.8
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 2.4e-31 139.8 211 43.6
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 2.4e-31 139.8 211 43.6
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 9.0e-31 137.9 210 41.9
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 9.0e-31 137.9 210 41.9
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 2.0e-30 136.7 211 43.1
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 2.6e-30 136.3 211 43.1
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 5.8e-30 135.2 207 42.5
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 7.6e-30 134.8 211 42.7
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 1.3e-29 134.0 218 44.5
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.7e-29 133.7 200 42.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.2e-29 133.3 176 46.6
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 2.2e-29 133.3 172 47.1
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.8e-29 132.5 120 54.2
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 5.0e-29 132.1 206 41.7
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.4e-28 130.6 196 43.9
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.9e-28 130.2 206 41.3
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 3.2e-28 129.4 210 42.9
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.2e-27 127.5 176 46.0
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.7e-27 126.3 171 46.2
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.6e-27 125.6 210 42.9
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 6.1e-27 125.2 186 42.5
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 7.9e-27 124.8 197 42.6
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 1.0e-26 124.4 218 41.3
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.0e-26 124.4 204 41.7
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.8e-26 123.6 205 40.0
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 3.0e-26 122.9 205 42.4
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.1e-26 122.1 211 41.7
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 6.7e-26 121.7 199 42.2
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.7e-26 121.3 209 41.6
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 1.5e-25 120.6 208 40.4
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.9e-25 120.2 174 45.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 6.3e-24 115.2 175 40.6
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 1.4e-23 114.0 204 40.2
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 3.1e-23 112.8 222 39.2
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 5.3e-23 112.1 276 34.1
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 9.0e-23 111.3 119 47.9
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 3.2e-20 102.8 167 40.1
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.2e-20 102.8 74 62.2
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 4.2e-20 102.4 164 42.1
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 3.6e-19 99.4 99 48.5
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 5.1e-18 95.5 118 51.7
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 7.4e-17 91.7 181 38.1
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 7.4e-17 91.7 185 37.3
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.2e-16 90.1 162 38.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 2.8e-16 89.7 210 37.6
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 4.1e-15 85.9 102 52.0
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 4.1e-15 85.9 75 61.3
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 5.3e-15 85.5 193 37.3
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-13 81.3 118 46.6
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 1.1e-07 61.2 90 38.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 1.5e-06 57.4 109 41.3
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 5.9e-06 55.5 125 32.8


User provided reference genes

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