Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 2.6e-181 638.6 336 100.0
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 2.6e-181 638.6 336 100.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.9e-75 287.0 283 61.5
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.2e-72 277.7 284 58.5
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 5.6e-67 258.8 251 60.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.1e-66 255.0 309 54.4
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.1e-65 253.1 283 55.8
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.2e-64 251.1 319 52.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 7.8e-61 238.4 208 63.0
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.9e-59 233.8 313 48.2
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 4.3e-59 232.6 164 73.2
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 1.3e-58 231.1 184 65.8
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 8.1e-58 228.4 215 59.5
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 4.0e-57 226.1 181 66.9
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 6.9e-57 225.3 183 66.7
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.5e-56 224.2 172 68.0
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 4.5e-56 222.6 154 72.1
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 7.6e-56 221.9 182 67.0
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 1.7e-55 220.7 183 64.5
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.7e-55 220.7 180 65.6
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 2.9e-55 219.9 182 64.3
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 6.4e-55 218.8 236 53.0
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 6.4e-55 218.8 184 63.6
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 1.4e-54 217.6 221 58.4
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 2.4e-54 216.9 182 65.9
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 2.4e-54 216.9 292 47.6
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.4e-54 216.9 193 62.7
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 3.2e-54 216.5 189 60.3
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 3.2e-54 216.5 257 52.9
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 4.2e-54 216.1 310 47.7
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 5.4e-54 215.7 180 62.8
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 7.1e-54 215.3 196 61.7
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 2.7e-53 213.4 273 51.6
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 7.9e-53 211.8 277 50.2
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 7.9e-53 211.8 145 75.2
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 7.9e-53 211.8 285 44.9
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 1.0e-52 211.5 305 45.2
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 1.3e-52 211.1 150 72.7
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.8e-52 210.7 189 59.3
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.3e-52 210.3 250 52.8
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 3.0e-52 209.9 299 48.5
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 3.0e-52 209.9 230 52.2
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 3.0e-52 209.9 150 72.7
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 3.0e-52 209.9 278 46.8
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.0e-52 209.9 278 47.5
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 3.9e-52 209.5 278 47.5
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 5.1e-52 209.1 134 80.6
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 5.1e-52 209.1 190 61.6
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 5.1e-52 209.1 154 64.9
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 5.1e-52 209.1 144 75.0
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 8.7e-52 208.4 225 54.7
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 8.7e-52 208.4 150 72.7
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 8.7e-52 208.4 286 47.2
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 8.7e-52 208.4 252 49.2
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 1.9e-51 207.2 150 70.7
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 1.9e-51 207.2 150 70.7
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 1.9e-51 207.2 150 70.7
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 1.9e-51 207.2 150 70.7
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 2.5e-51 206.8 151 70.2
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 2.5e-51 206.8 299 47.2
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 2.5e-51 206.8 276 52.2
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 5.6e-51 205.7 203 58.1
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 7.4e-51 205.3 306 44.8
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 1.6e-50 204.1 283 48.1
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 2.1e-50 203.8 295 45.8
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 3.7e-50 203.0 225 53.8
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 4.8e-50 202.6 158 67.1
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 8.1e-50 201.8 225 53.8
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.4e-49 201.1 217 54.4
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.4e-49 201.1 220 55.0
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 1.4e-49 201.1 289 46.7
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.4e-49 201.1 309 44.3
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.8e-49 200.7 217 53.9
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 2.4e-49 200.3 241 52.3
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 4.0e-49 199.5 296 45.3
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 5.3e-49 199.1 161 67.1
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.3e-49 199.1 161 67.1
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.2e-48 198.0 187 58.3
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 2.0e-48 197.2 132 76.5
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.0e-48 197.2 294 44.9
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 5.8e-48 195.7 139 71.9
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 7.6e-48 195.3 134 74.6
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 7.6e-48 195.3 154 61.7
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 1.0e-47 194.9 207 54.6
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 1.0e-47 194.9 169 63.9
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.3e-47 194.5 134 72.4
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-47 194.1 158 63.9
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.2e-47 193.7 285 44.6
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 6.5e-47 192.2 132 73.5
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 6.5e-47 192.2 183 57.9
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.4e-46 191.0 186 62.4
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 2.5e-46 190.3 296 44.6
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 5.5e-46 189.1 320 41.6
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.3e-46 188.3 247 50.6
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 2.7e-45 186.8 230 53.5
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 3.5e-45 186.4 157 63.7
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 3.5e-45 186.4 205 53.7
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 3.5e-45 186.4 284 42.6
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.6e-45 186.0 142 69.0
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-44 184.5 159 62.3
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-44 184.5 159 62.3
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.8e-44 184.1 165 63.0
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.8e-44 184.1 136 71.3
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 3.0e-44 183.3 262 48.1
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 3.0e-44 183.3 201 55.2
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 8.7e-44 181.8 203 56.2
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 1.5e-43 181.0 340 39.4
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 1.9e-43 180.6 234 47.9
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.9e-43 180.6 292 43.5
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 3.3e-43 179.9 159 62.9
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 4.3e-43 179.5 282 44.3
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 7.4e-43 178.7 183 55.7
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 4.8e-42 176.0 228 48.2
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 6.2e-42 175.6 159 59.7
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.1e-41 174.9 304 42.4
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.4e-41 174.5 182 56.6
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.0e-40 170.6 202 51.0
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 7.6e-40 168.7 222 46.4
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.8e-39 166.4 136 66.9
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.9e-38 164.1 155 55.5
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.5e-38 162.5 357 34.5
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 7.1e-38 162.2 132 63.6
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 3.5e-37 159.8 188 50.5
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-36 157.9 152 59.9
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 7.4e-35 152.1 132 62.1
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 7.7e-32 142.1 89 83.1
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 1.1e-30 138.3 165 49.7
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 9.4e-30 135.2 205 43.9
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.2e-29 134.8 142 54.2
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.6e-29 132.9 102 70.6
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.4e-28 131.3 178 44.9
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 2.3e-28 130.6 259 37.1
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-27 128.3 125 56.0
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.3e-26 124.8 130 49.2
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 6.7e-20 102.4 131 44.3
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 8.2e-18 95.5 198 33.8
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 3.8e-15 86.7 87 54.0
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 6.1e-13 79.3 100 50.0
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.0e-12 78.6 133 34.6
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 3.9e-12 76.6 204 37.3
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 1.1e-11 75.1 141 34.8
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 1.5e-11 74.7 215 32.1
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 1.1e-09 68.6 57 63.2
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 1.2e-08 65.1 176 28.4


User provided reference genes

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