Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27505 Selenicereus undatus HOM05D021897 ORTHO05D010954 2.1e-103 379.0 194 100.0
Hund21891 Selenicereus undatus HOM05D008994 ORTHO05D010954 1.6e-37 160.2 113 76.1
Hund21894 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.5e-35 153.7 88 87.5
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 3.2e-30 136.0 88 78.4
Hund21890 Selenicereus undatus HOM05D021897 ORTHO05D010307 2.3e-28 129.8 69 98.6
AUR62005166 Chenopodium quinoa HOM05D001413 ORTHO05D003288 1.4e-22 110.5 88 62.5
AUR62006791 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.1e-20 102.1 83 60.2
AUR62006756 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.1e-19 100.9 84 59.5
AUR62000462 Chenopodium quinoa HOM05D000162 ORTHO05D010954 4.3e-19 99.0 84 58.3
AUR62000390 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.6e-19 97.8 81 59.3
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.2e-18 97.4 84 57.1
AUR62000391 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.1e-12 75.5 89 46.1
AUR62017647 Chenopodium quinoa HOM05D000162 ORTHO05D003288 6.6e-12 75.1 63 60.3
AUR62000443 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.7e-12 74.7 59 61.0
AUR62006962 Chenopodium quinoa HOM05D000162 ORTHO05D003288 8.7e-12 74.7 62 61.3
EL10Ac4g09782 Beta vulgaris HOM05D000162 ORTHO05D000090 1.1e-11 74.3 123 35.8
AUR62000667 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.1e-11 74.3 63 60.3
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 2.5e-11 73.2 82 42.7
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 2.5e-11 73.2 82 42.7
Ah.06g190010 Amaranthus hybridus HOM05D000162 ORTHO05D000090 3.3e-11 72.8 120 36.7
AUR62000691 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.3e-11 72.8 63 60.3
AUR62005167 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.6e-11 72.0 59 64.4
AUR62005214 Chenopodium quinoa HOM05D000162 ORTHO05D003288 5.6e-11 72.0 59 64.4
AUR62005305 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.3e-11 71.6 59 64.4
AUR62005307 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.3e-11 71.6 59 64.4
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 7.3e-11 71.6 84 45.2
Hund21879 Selenicereus undatus HOM05D000031 ORTHO05D000030 1.3e-10 70.9 49 73.5
EL10Ac4g09779 Beta vulgaris HOM05D004640 ORTHO05D005489 1.6e-10 70.5 58 58.6
AUR62005276 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.6e-10 70.5 59 61.0
AUR62005303 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.6e-10 70.5 59 61.0
AUR62007002 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.6e-10 70.5 59 61.0
AUR62005301 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.1e-10 70.1 121 36.4
MBI11_g20198_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 2.1e-10 70.1 80 42.5
EL10Ac4g09824 Beta vulgaris HOM05D000162 ORTHO05D000090 2.8e-10 69.7 83 42.2
EL10Ac4g09780 Beta vulgaris HOM05D000162 ORTHO05D000090 3.6e-10 69.3 120 35.0
Ca_31091_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 3.6e-10 69.3 86 40.7
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 3.6e-10 69.3 92 41.3
FAN11G2498 Fragaria x ananassa HOM05D000044 ORTHO05D000090 6.2e-10 68.6 90 44.4
AUR62000456 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.1e-10 68.2 55 61.8
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 1.1e-09 67.8 72 47.2
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.4e-09 67.4 66 50.0
Ah.06g195650 Amaranthus hybridus HOM05D000162 ORTHO05D000090 1.8e-09 67.0 82 42.7
EL10Ac4g09784 Beta vulgaris HOM05D000162 ORTHO05D000090 1.8e-09 67.0 55 61.8
AUR62006790 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.8e-09 67.0 55 60.0
AUR62005267 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.4e-09 66.6 59 61.0
AUR62000458 Chenopodium quinoa HOM05D000162 ORTHO05D000090 3.1e-09 66.2 55 60.0
EL10Ac4g09382 Beta vulgaris HOM05D000162 ORTHO05D000090 5.3e-09 65.5 49 61.2
EL10Ac4g09388 Beta vulgaris HOM05D000162 ORTHO05D000090 5.3e-09 65.5 49 61.2
EL10Ac4g09485 Beta vulgaris HOM05D000162 ORTHO05D000090 5.3e-09 65.5 74 54.1
Prupe.6G093300 Prunus persica HOM05D000162 ORTHO05D000090 5.3e-09 65.5 98 39.8
EL10Ac4g09728 Beta vulgaris HOM05D000162 ORTHO05D000090 6.9e-09 65.1 59 54.2
AUR62000678 Chenopodium quinoa HOM05D000162 ORTHO05D003288 6.9e-09 65.1 53 64.2
EL10Ac4g09725 Beta vulgaris HOM05D000162 ORTHO05D000090 9.0e-09 64.7 58 55.2
AUR62004849 Chenopodium quinoa HOM05D000162 ORTHO05D000090 9.0e-09 64.7 55 61.8
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.0e-09 64.7 84 40.5
EL10Ac4g09445 Beta vulgaris HOM05D000162 ORTHO05D000090 1.2e-08 64.3 49 59.2
AUR62000700 Chenopodium quinoa HOM05D000162 ORTHO05D003288 1.2e-08 64.3 53 64.2
AUR62000690 Chenopodium quinoa HOM05D000162 ORTHO05D003288 2.0e-08 63.5 123 36.6
FAN11G2213 Fragaria x ananassa HOM05D000162 ORTHO05D000090 2.0e-08 63.5 66 50.0
ECA240G1752 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.6e-08 63.2 82 40.2
Ah.13g076900 Amaranthus hybridus HOM05D000162 ORTHO05D000090 3.4e-08 62.8 83 44.6
AUR62000649 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.4e-08 62.8 55 60.0
ECA238G3298 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.5e-08 62.4 66 47.0
AUR62000489 Chenopodium quinoa HOM05D000162 ORTHO05D000090 5.8e-08 62.0 51 60.8
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 5.8e-08 62.0 87 37.9
RcHm_v2.0_Chr5g0076121 Rosa chinensis HOM05D010115 ORTHO05D014601 7.6e-08 61.6 65 52.3
Migut.F00849 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-08 61.2 79 39.2
PSO675G5598 Papaver somniferum HOM05D008994 ORTHO05D010954 9.9e-08 61.2 78 44.9
RcHm_v2.0_Chr5g0078541 Rosa chinensis HOM05D009346 ORTHO05D012019 9.9e-08 61.2 80 47.5
EL10Ac4g09599 Beta vulgaris HOM05D000162 ORTHO05D000090 1.7e-07 60.5 55 56.4
Dinv00587 Davidia involucrata HOM05D010002 ORTHO05D011797 1.7e-07 60.5 87 35.6
MD04G1014300 Malus domestica HOM05D000162 ORTHO05D000090 1.7e-07 60.5 85 36.5
arahy.Tifrunner.gnm1.ann1.H82N3I Arachis hypogaea HOM05D000162 ORTHO05D000090 2.2e-07 60.1 82 36.6
PSO675G1932 Papaver somniferum HOM05D008994 ORTHO05D010954 2.2e-07 60.1 76 43.4
AUR62040932 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.9e-07 59.7 59 57.6
ECA240G4052 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.9e-07 59.7 65 40.0
Glyma.07G102000 Glycine max HOM05D010072 ORTHO05D011797 2.9e-07 59.7 73 42.5
Rhsim13G0031600 Rhododendron simsii HOM05D001376 ORTHO05D003384 2.9e-07 59.7 95 38.9
AUR62000650 Chenopodium quinoa HOM05D000162 ORTHO05D003288 3.8e-07 59.3 47 66.0
PGSC0003DMG400020556 Solanum tuberosum HOM05D000162 ORTHO05D000090 3.8e-07 59.3 66 47.0
SGA_v2.0_scaffold19G08853 Striga asiatica HOM05D000162 ORTHO05D000090 3.8e-07 59.3 93 37.6
AUR62000760 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.9e-07 58.9 55 60.0
MD11G1128300 Malus domestica HOM05D014620 ORTHO05D016319 6.4e-07 58.5 53 52.8
AUR62005302 Chenopodium quinoa HOM05D000162 ORTHO05D000090 8.4e-07 58.2 57 56.1
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 8.4e-07 58.2 83 42.2
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 1.1e-06 57.8 82 36.6
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.1e-06 57.8 83 36.1
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 1.1e-06 57.8 82 36.6
AUR62000652 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.1e-06 57.8 121 32.2
Dinv10023 Davidia involucrata HOM05D010072 ORTHO05D011797 1.1e-06 57.8 75 37.3
ECA234G1654 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-06 57.8 89 34.8
FAN21G3177 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.1e-06 57.8 83 38.6
PGR083G1952 Punica granatum HOM05D009346 ORTHO05D003288 1.1e-06 57.8 73 43.8
SGA_v2.0_scaffold19G08828 Striga asiatica HOM05D000162 ORTHO05D000090 1.1e-06 57.8 65 41.5
VMungo0464G0652 Vigna mungo HOM05D000162 ORTHO05D000090 1.1e-06 57.8 79 40.5
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.4e-06 57.4 82 36.6
Cc02_g34440 Coffea canephora HOM05D000162 ORTHO05D000090 1.4e-06 57.4 87 34.5
MD11G1117500 Malus domestica HOM05D010115 ORTHO05D014601 1.4e-06 57.4 50 58.0
PSO675G8851 Papaver somniferum HOM05D008994 ORTHO05D010954 1.4e-06 57.4 72 45.8
AUR62000692 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 57.0 53 60.4
Migut.F00916 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.9e-06 57.0 83 37.3
Medtr0014s0260 Medicago truncatula HOM05D008100 ORTHO05D009715 1.9e-06 57.0 57 49.1
TAR633G1519 Trochodendron aralioides HOM05D017878 ORTHO05D018225 1.9e-06 57.0 88 30.7
Cc02_g34450 Coffea canephora HOM05D000162 ORTHO05D000090 2.4e-06 56.6 81 37.0
ECA240G0604 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.4e-06 56.6 74 39.2
Hund21889 Selenicereus undatus HOM05D021897 ORTHO05D000090 2.4e-06 56.6 53 58.5
RcHm_v2.0_Chr6g0265911 Rosa chinensis HOM05D010115 ORTHO05D000090 3.2e-06 56.2 50 60.0
TPR.G7961 Trifolium pratense HOM05D000424 ORTHO05D000355 3.2e-06 56.2 83 32.5
BcaC03g13436 Brassica carinata HOM05D000424 ORTHO05D000355 4.2e-06 55.8 82 34.1
C02p07450 Brassica napus HOM05D000424 ORTHO05D000355 4.2e-06 55.8 82 34.1
BolC2t06676H Brassica oleracea HOM05D000424 ORTHO05D000355 4.2e-06 55.8 82 34.1
AUR62000447 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.2e-06 55.8 45 60.0
Migut.F00914 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.2e-06 55.8 68 39.7
HanXRQChr07g0204981 Helianthus annuus HOM05D000162 ORTHO05D000090 4.2e-06 55.8 79 39.2
PSO339G3988 Papaver somniferum HOM05D007212 ORTHO05D009094 4.2e-06 55.8 86 29.1
PSO675G5929 Papaver somniferum HOM05D008994 ORTHO05D010954 4.2e-06 55.8 76 40.8
Migut.F00848 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.4e-06 55.5 82 35.4
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 5.4e-06 55.5 73 41.1
Hma1.2p1_0286F.1_g114160 Hydrangea macrophylla HOM05D005287 ORTHO05D006893 5.4e-06 55.5 76 38.2
MSTRG.8165 Avicennia marina HOM05D005287 ORTHO05D006893 7.1e-06 55.1 81 40.7
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 7.1e-06 55.1 79 35.4
FvH4_3g42580 Fragaria vesca HOM05D000002 ORTHO05D000001 7.1e-06 55.1 82 35.4
HanXRQChr07g0204091 Helianthus annuus HOM05D000162 ORTHO05D000090 7.1e-06 55.1 79 40.5
Nn1g09793 Nelumbo nucifera HOM05D002453 ORTHO05D002107 7.1e-06 55.1 84 38.1
Rhsim08G0155900 Rhododendron simsii HOM05D002453 ORTHO05D002107 7.1e-06 55.1 85 35.3
RcHm_v2.0_Chr6g0265891 Rosa chinensis HOM05D010115 ORTHO05D000090 7.1e-06 55.1 50 58.0
MSTRG.9116 Avicennia marina HOM05D000162 ORTHO05D000090 9.3e-06 54.7 90 34.4
HanXRQChr07g0204971 Helianthus annuus HOM05D000162 ORTHO05D000090 9.3e-06 54.7 79 38.0
PSO832G3010 Papaver somniferum HOM05D008994 ORTHO05D010954 9.3e-06 54.7 74 44.6
PGR083G0809 Punica granatum HOM05D010002 ORTHO05D011797 9.3e-06 54.7 80 36.2
VMungo0464G0905 Vigna mungo HOM05D008100 ORTHO05D009715 9.3e-06 54.7 91 36.3


User provided reference genes

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