Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 0.0e+00 1251.5 642 100.0
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.2e-297 1024.2 576 83.7
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 2.2e-293 1011.9 584 82.7
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 3.5e-283 978.0 584 79.3
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.3e-269 932.9 583 74.1
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.6e-267 926.0 581 74.0
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 2.7e-267 925.2 577 75.7
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 2.3e-266 922.2 578 74.6
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.9e-266 921.8 584 74.0
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.5e-265 919.5 581 74.9
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.9e-265 919.1 580 74.5
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 3.3e-265 918.3 576 74.3
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.1e-264 915.6 587 73.8
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.8e-264 915.2 587 73.3
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.6e-262 908.7 581 73.7
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.4e-262 907.9 581 73.8
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.9e-261 904.4 580 72.8
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 7.0e-260 900.6 587 72.4
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 7.0e-260 900.6 578 73.2
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 1.2e-259 899.8 584 73.5
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 3.5e-259 898.3 575 72.0
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 7.8e-259 897.1 582 72.9
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.3e-258 896.3 587 72.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 3.0e-258 895.2 587 73.4
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 5.6e-257 891.0 592 71.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 7.3e-257 890.6 576 72.7
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 7.3e-257 890.6 584 71.4
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 9.5e-257 890.2 586 72.5
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.7e-256 887.9 590 70.8
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.0e-255 886.7 590 70.0
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.0e-255 886.7 583 71.9
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.0e-255 886.7 575 71.5
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.4e-255 886.3 582 72.0
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 3.1e-255 885.2 571 73.0
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 4.0e-255 884.8 578 71.3
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 4.0e-255 884.8 571 72.9
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 8.9e-255 883.6 583 71.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 8.9e-255 883.6 570 73.2
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 4.4e-254 881.3 578 72.7
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 2.2e-253 879.0 574 71.4
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 2.2e-253 879.0 585 70.9
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 2.9e-253 878.6 581 71.6
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 3.7e-253 878.2 577 70.7
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.4e-252 876.3 669 64.0
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 2.4e-252 875.5 574 71.4
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 3.2e-252 875.2 581 71.4
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.0e-252 874.0 606 69.1
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 9.2e-252 873.6 617 68.1
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.0e-251 872.5 574 73.9
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.0e-250 870.2 583 69.6
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 8.6e-250 867.1 583 70.5
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.1e-249 866.7 580 69.7
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.9e-249 865.9 577 69.8
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 3.3e-249 865.1 580 69.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 4.7e-248 861.3 583 69.1
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 8.1e-248 860.5 583 69.0
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.8e-247 859.4 580 70.0
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 6.8e-247 857.4 583 69.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.2e-246 856.7 576 70.5
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.5e-246 856.3 583 68.8
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.0e-246 855.9 569 71.0
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 5.8e-246 854.4 626 66.8
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.7e-245 852.8 580 70.3
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.1e-244 850.1 581 69.2
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.9e-244 849.4 588 68.7
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 4.1e-244 848.2 575 70.4
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.1e-243 845.9 583 68.1
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 9.5e-241 837.0 579 68.0
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 4.7e-240 834.7 589 67.4
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 8.1e-240 833.9 542 71.8
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 2.0e-238 829.3 586 68.4
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 3.5e-235 818.5 580 67.4
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 7.8e-235 817.4 580 67.2
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 3.9e-234 815.1 582 66.7
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 9.6e-233 810.4 584 66.8
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 2.8e-232 808.9 584 66.8
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 1.8e-231 806.2 533 72.0
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.0e-226 790.4 585 66.0
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 8.7e-226 787.3 589 65.9
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 1.1e-225 786.9 571 66.4
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 5.6e-225 784.6 575 65.6
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 2.4e-223 779.2 590 65.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 2.4e-223 779.2 590 65.3
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 9.0e-223 777.3 581 64.7
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.2e-222 776.9 589 64.5
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.6e-222 775.8 540 68.0
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 3.4e-222 775.4 587 64.9
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 1.7e-221 773.1 579 63.2
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 9.3e-220 767.3 584 65.1
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 7.1e-212 741.1 582 61.5
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 4.0e-207 725.3 617 59.2
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.9e-204 716.5 575 60.5
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.3e-189 667.2 549 59.2
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 1.7e-189 666.8 579 58.4
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 3.7e-184 649.0 581 56.1
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.7e-181 640.2 580 56.0
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 7.7e-174 614.8 593 53.5
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.2e-169 600.9 474 61.4
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 4.4e-169 599.0 589 53.1
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.5e-166 589.3 371 71.7
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 3.2e-164 582.8 574 50.9
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.9e-128 463.4 528 49.1
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.6e-123 447.6 255 80.4
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.8e-93 347.8 210 77.1
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 1.8e-69 268.1 196 66.8
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 2.2e-64 251.1 196 58.2
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 4.7e-54 216.9 223 52.5
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 9.4e-47 192.6 102 81.4
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.9e-39 168.3 133 57.1
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 4.1e-26 124.0 103 54.4
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.2e-25 122.5 65 80.0
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.3e-24 119.0 75 74.7
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 1.9e-23 115.2 65 76.9
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.4e-13 82.4 37 97.3
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.3e-13 81.6 72 55.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 6.4e-11 73.6 39 79.5
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 8.3e-11 73.2 38 84.2
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 6.6e-08 63.5 62 50.0


User provided reference genes

Program Settings