Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 0.0e+00 1213.0 704 100.0
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 5.3e-200 701.8 700 61.0
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 4.6e-196 688.7 707 59.4
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 7.8e-196 688.0 694 61.5
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.8e-193 679.5 694 61.1
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 2.3e-179 633.3 690 57.0
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 8.7e-179 631.3 690 54.3
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.1e-176 624.4 692 56.1
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 3.1e-176 622.9 699 54.2
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.2e-175 620.9 706 56.1
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.3e-174 617.5 701 56.8
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.9e-174 616.3 705 55.6
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.6e-172 610.5 697 55.7
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.6e-169 600.5 691 55.6
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 3.7e-169 599.4 697 55.2
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.1e-168 597.8 691 56.2
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 1.8e-168 597.0 691 55.4
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.1e-168 596.3 726 52.6
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.5e-167 594.0 696 53.4
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.2e-166 590.1 707 52.6
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 6.5e-166 588.6 684 53.1
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 1.4e-165 587.4 690 54.8
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 4.2e-165 585.9 695 54.4
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 5.5e-165 585.5 691 53.5
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.1e-164 583.6 700 54.6
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.0e-163 581.3 707 53.7
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 3.0e-163 579.7 698 53.6
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 6.7e-163 578.6 696 52.6
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 8.8e-163 578.2 710 53.2
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 2.0e-162 577.0 692 53.8
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.5e-162 576.6 700 54.4
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 3.3e-162 576.2 688 54.5
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 2.8e-161 573.2 706 52.7
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.1e-160 571.2 692 53.5
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 2.6e-159 566.6 715 50.3
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 3.4e-159 566.2 684 53.7
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 4.5e-159 565.8 714 53.2
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.3e-158 564.3 715 53.8
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.7e-158 563.9 694 51.9
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 7.2e-157 558.5 704 47.4
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 2.7e-156 556.6 768 49.3
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 3.6e-156 556.2 704 52.3
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 1.4e-155 554.3 711 51.5
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 2.3e-155 553.5 714 48.5
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 3.0e-155 553.1 689 51.7
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.0e-154 550.4 726 50.6
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 2.0e-154 550.4 702 52.3
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 3.3e-154 549.7 714 50.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.3e-154 549.7 692 50.3
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.8e-153 546.6 714 48.0
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 3.7e-153 546.2 724 52.6
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.4e-152 544.3 712 52.5
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 3.1e-152 543.1 720 50.7
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 5.3e-152 542.3 708 51.7
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 5.3e-152 542.3 711 48.4
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 1.2e-151 541.2 708 49.9
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 4.5e-151 539.3 693 54.5
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.3e-150 537.7 697 50.9
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 3.8e-150 536.2 715 47.4
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 8.5e-150 535.0 713 47.7
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.6e-148 530.8 608 53.0
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.8e-147 527.3 587 53.7
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.3e-145 521.2 692 54.5
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 2.8e-145 520.0 547 54.1
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 2.9e-142 510.0 704 49.0
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.1e-141 508.1 690 48.7
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 3.2e-141 506.5 695 49.6
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 4.2e-141 506.1 702 51.4
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 4.7e-140 502.7 551 55.2
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 8.0e-140 501.9 547 53.6
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.4e-139 501.1 699 48.8
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 3.0e-139 500.0 710 46.5
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.2e-138 498.0 540 55.6
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-138 497.3 540 55.6
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 9.7e-138 495.0 682 52.5
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 9.7e-138 495.0 695 46.5
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 2.7e-135 486.9 691 50.4
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 1.7e-134 484.2 591 54.5
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 8.5e-134 481.9 714 48.2
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 2.0e-130 470.7 691 46.0
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 5.7e-130 469.2 739 45.7
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 7.5e-130 468.8 529 49.5
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 2.8e-129 466.8 541 51.8
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.2e-127 461.5 529 52.4
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.0e-126 458.4 541 49.9
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.3e-126 458.0 583 53.2
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.3e-126 457.2 546 48.9
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 4.2e-125 453.0 688 45.6
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.4e-123 448.0 607 45.3
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 5.2e-123 446.0 521 49.9
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.6e-122 443.7 576 51.0
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.5e-119 433.3 640 44.8
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 3.6e-116 423.3 519 48.4
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 3.6e-116 423.3 519 48.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.4e-115 421.4 476 52.1
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 2.9e-113 413.7 519 48.2
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 5.6e-109 399.4 605 47.9
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.5e-101 374.8 540 47.0
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 8.3e-97 359.0 303 58.7
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 2.4e-96 357.5 702 41.5
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 5.4e-96 356.3 477 47.0
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 2.9e-89 334.0 619 42.2
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.1e-87 327.8 379 49.1
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 5.6e-85 319.7 475 41.7
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.0e-63 246.5 331 46.5
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.3e-59 233.4 539 34.7
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 3.5e-55 220.7 223 56.1
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.3e-54 218.8 504 34.1
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 7.7e-42 176.4 231 45.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 2.6e-37 161.4 318 34.6
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.9e-32 145.2 534 30.3
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.4e-22 112.5 166 44.0
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 7.0e-19 100.1 199 55.8
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 4.1e-11 74.3 57 57.9
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 4.7e-07 60.8 115 35.7
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 6.8e-06 57.0 150 36.0


User provided reference genes

Program Settings