Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 3.2e-228 794.7 383 100.0
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.2e-169 600.1 336 84.2
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.0e-157 560.5 332 79.5
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.5e-156 556.6 333 79.3
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 8.1e-155 550.8 299 83.9
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.1e-154 550.4 328 77.7
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 2.4e-154 549.3 332 78.6
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 4.0e-154 548.5 305 83.0
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 4.0e-154 548.5 333 77.2
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 6.9e-154 547.7 313 80.8
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 9.0e-154 547.4 336 77.1
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 9.0e-154 547.4 336 77.1
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 1.2e-153 547.0 333 76.9
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.5e-153 546.6 298 83.9
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.5e-153 546.6 335 77.0
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 2.0e-153 546.2 302 83.4
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 3.4e-153 545.4 323 78.9
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 4.5e-153 545.0 334 76.9
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 4.5e-153 545.0 303 82.5
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 4.5e-153 545.0 336 76.8
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.0e-152 543.9 333 76.6
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.3e-152 543.5 325 79.1
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 1.3e-152 543.5 305 82.6
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 1.7e-152 543.1 306 81.0
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 3.8e-152 542.0 326 78.2
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 3.8e-152 542.0 329 77.5
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 6.5e-152 541.2 333 77.5
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 6.5e-152 541.2 295 83.1
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.1e-151 540.4 309 80.9
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.9e-151 539.7 311 80.1
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-151 539.7 311 80.1
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.9e-151 539.7 311 80.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.9e-151 539.7 299 83.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.5e-151 539.3 330 77.3
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 9.3e-151 537.3 305 82.0
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 9.3e-151 537.3 329 76.9
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 9.3e-151 537.3 297 81.5
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 9.3e-151 537.3 335 76.4
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-150 536.6 311 79.7
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 2.1e-150 536.2 305 81.3
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 6.0e-150 534.6 318 78.3
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 6.0e-150 534.6 347 74.9
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 7.9e-150 534.3 325 77.8
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.0e-149 533.9 311 79.1
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.9e-149 531.9 311 78.5
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 6.7e-149 531.2 320 77.5
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 6.7e-149 531.2 305 80.7
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 8.7e-149 530.8 306 79.1
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.5e-148 530.0 298 81.9
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.9e-148 529.6 330 76.7
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.9e-148 529.6 318 76.7
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 9.6e-148 527.3 320 75.6
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 9.6e-148 527.3 328 74.4
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 9.6e-148 527.3 326 75.8
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 2.1e-147 526.2 309 80.3
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 2.8e-147 525.8 327 75.5
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 2.8e-147 525.8 313 78.3
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 4.8e-147 525.0 335 75.5
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 4.8e-147 525.0 330 74.2
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 6.2e-147 524.6 317 77.9
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.1e-146 522.3 295 81.4
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 4.1e-146 521.9 304 78.9
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 4.1e-146 521.9 327 75.5
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.2e-145 520.4 317 78.5
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.5e-145 520.0 326 74.5
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.5e-145 518.5 335 74.6
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 4.5e-145 518.5 321 75.7
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 5.8e-145 518.1 342 74.0
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 5.8e-145 518.1 342 74.0
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 5.8e-145 518.1 328 74.7
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 7.6e-145 517.7 312 76.6
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 3.8e-144 515.4 317 77.3
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.8e-144 515.4 299 78.6
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 5.5e-143 511.5 338 71.3
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.2e-142 510.4 296 78.4
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 8.2e-139 497.7 333 71.5
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 4.1e-138 495.4 295 76.3
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 5.9e-137 491.5 361 66.2
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.3e-133 479.6 250 88.4
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 2.6e-129 466.1 281 77.9
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 7.2e-127 458.0 269 78.1
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 4.4e-124 448.7 263 77.2
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 4.4e-124 448.7 333 67.3
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 9.1e-122 441.0 255 78.4
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.6e-121 439.5 241 83.4
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 3.5e-121 439.1 292 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 5.0e-120 435.3 289 69.2
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.1e-119 434.1 264 75.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.2e-118 430.6 263 76.4
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 1.2e-118 430.6 241 81.3
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.1e-118 429.9 241 80.9
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 6.1e-118 428.3 292 66.4
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 6.7e-117 424.9 343 60.1
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 8.2e-115 417.9 264 74.6
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 2.4e-114 416.4 291 65.6
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 5.5e-111 405.2 262 74.4
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 9.4e-103 377.9 235 75.3
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 3.7e-99 365.9 208 80.3
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 4.1e-98 362.5 204 79.9
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 5.6e-95 352.1 182 85.2
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 8.0e-94 348.2 249 66.3
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.0e-89 333.6 236 69.1
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 9.2e-74 281.6 170 74.7
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 1.2e-70 271.2 294 48.3
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 8.1e-70 268.5 301 48.8
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 6.8e-69 265.4 202 66.3
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.5e-60 237.7 187 63.6
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 1.3e-59 234.6 156 72.4
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.3e-56 224.6 136 77.9
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.8e-54 216.9 310 41.3
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 1.1e-45 188.3 150 66.0
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 1.5e-44 184.5 186 57.0
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 7.6e-44 182.2 275 36.0
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.7e-43 181.0 285 41.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 9.3e-42 175.3 133 66.9
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.1e-34 151.8 281 36.3
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 6.9e-29 132.5 157 43.9
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 2.6e-28 130.6 271 32.8
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.3e-22 111.7 82 65.9
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 5.9e-20 102.8 87 63.2
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 2.4e-13 80.9 57 68.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.3e-13 79.7 95 48.4
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.4e-10 71.6 42 76.2
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 2.5e-10 70.9 41 75.6
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.7e-06 57.0 30 83.3


User provided reference genes

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