Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 1.2e-144 516.5 269 100.0
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 1.5e-118 429.9 269 79.9
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 3.6e-117 425.2 269 75.8
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 8.1e-117 424.1 269 75.8
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 8.1e-117 424.1 269 76.2
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 1.1e-116 423.7 269 75.5
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 2.3e-116 422.5 269 76.2
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 3.1e-116 422.2 269 75.8
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 8.9e-116 420.6 270 75.6
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 2.0e-115 419.5 271 77.5
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 2.6e-115 419.1 269 75.1
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 3.4e-115 418.7 270 75.6
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 3.4e-115 418.7 268 74.3
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 7.6e-115 417.5 269 75.1
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 9.9e-115 417.2 269 74.0
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 9.9e-115 417.2 269 74.7
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.7e-114 416.4 271 76.4
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 2.2e-114 416.0 269 74.0
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 2.9e-114 415.6 271 76.0
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 2.9e-114 415.6 269 75.5
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 2.9e-114 415.6 269 75.1
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 3.8e-114 415.2 269 74.0
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 4.9e-114 414.8 269 74.0
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 4.9e-114 414.8 267 74.5
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 6.4e-114 414.5 269 74.3
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.1e-113 413.7 269 74.0
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 1.1e-113 413.7 268 75.4
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 1.4e-113 413.3 269 73.6
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 1.9e-113 412.9 269 74.3
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 5.4e-113 411.4 269 74.0
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 5.4e-113 411.4 269 74.7
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 7.1e-113 411.0 274 75.2
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 7.1e-113 411.0 267 74.5
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 7.1e-113 411.0 263 74.5
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 9.2e-113 410.6 269 74.3
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.2e-112 410.2 269 73.6
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 1.2e-112 410.2 269 73.2
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 1.2e-112 410.2 269 73.6
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 1.2e-112 410.2 269 74.3
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 1.6e-112 409.8 269 73.6
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.6e-112 409.8 269 73.6
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 2.1e-112 409.5 266 73.3
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 2.1e-112 409.5 269 73.2
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 2.1e-112 409.5 269 73.6
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 3.5e-112 408.7 269 73.2
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 4.6e-112 408.3 269 74.0
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 6.0e-112 407.9 268 74.3
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 6.0e-112 407.9 269 74.3
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 6.0e-112 407.9 269 74.0
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 7.8e-112 407.5 269 74.0
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 1.7e-111 406.4 269 73.6
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 2.3e-111 406.0 269 72.5
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 72.1
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 73.6
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 73.2
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 72.5
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 74.0
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 3.9e-111 405.2 269 72.5
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 3.9e-111 405.2 269 72.5
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 6.6e-111 404.4 267 72.7
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 8.6e-111 404.1 269 72.5
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 8.6e-111 404.1 269 74.0
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 8.6e-111 404.1 281 70.1
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 8.6e-111 404.1 269 72.5
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 1.5e-110 403.3 269 71.4
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 1.9e-110 402.9 269 72.1
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 1.9e-110 402.9 270 72.2
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.3e-110 402.1 269 71.4
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 4.3e-110 401.7 269 71.7
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.3e-110 401.7 269 71.7
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 4.3e-110 401.7 269 72.1
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 9.6e-110 400.6 271 72.3
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.2e-109 400.2 269 71.7
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 1.2e-109 400.2 270 71.9
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-109 399.8 269 71.4
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 3.6e-109 398.7 270 71.9
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 3.6e-109 398.7 270 71.9
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 3.6e-109 398.7 269 74.3
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 4.7e-109 398.3 269 72.1
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 4.7e-109 398.3 269 72.1
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 8.1e-109 397.5 269 71.7
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 8.1e-109 397.5 267 73.4
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 1.4e-108 396.7 306 66.0
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 4.0e-108 395.2 269 69.9
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 4.0e-108 395.2 269 69.9
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 269 70.6
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 275 70.2
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 6.9e-108 394.4 270 71.1
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.9e-108 394.4 269 70.6
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.9e-108 394.0 275 70.2
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.2e-107 393.7 275 70.2
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 1.2e-107 393.7 269 68.8
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 2.6e-107 392.5 268 68.3
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.9e-107 390.6 269 70.3
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 2.9e-106 389.0 269 71.0
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 4.9e-106 388.3 269 70.6
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 8.4e-106 387.5 269 73.2
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 2.4e-105 386.0 268 69.4
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 3.2e-105 385.6 265 68.7
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 9.3e-105 384.0 286 67.1
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 1.2e-104 383.6 269 68.8
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 1.6e-104 383.3 269 69.9
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 4.6e-104 381.7 269 69.1
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 2.3e-103 379.4 268 65.7
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 3.9e-103 378.6 269 69.5
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 5.1e-103 378.3 269 69.5
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 8.7e-103 377.5 270 70.4
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 1.9e-102 376.3 265 69.4
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 5.6e-102 374.8 266 66.9
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 9.6e-102 374.0 269 68.4
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 1.3e-101 373.6 252 73.0
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 1.6e-101 373.2 269 68.0
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 6.2e-101 371.3 269 67.7
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 3.1e-100 369.0 269 68.0
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 3.1e-100 369.0 269 67.7
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 4.0e-100 368.6 269 65.1
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.2e-99 367.1 269 67.7
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 9.9e-99 364.0 267 65.9
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 2.9e-98 362.5 269 66.5
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.8e-98 362.1 269 66.9
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.1e-97 360.5 275 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 1.4e-97 360.1 270 64.4
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.2e-97 359.0 276 63.4
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.3e-97 357.5 269 66.2
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.2e-96 357.1 276 62.7
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 4.6e-96 355.1 270 63.7
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 6.0e-96 354.8 269 66.2
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 1.8e-95 353.2 236 71.6
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 1.8e-95 353.2 269 62.8
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.3e-95 352.8 270 63.7
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.0e-95 352.4 276 62.7
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.0e-95 352.4 270 63.7
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 1.9e-94 349.7 270 62.2
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.3e-94 348.6 271 62.4
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 2.1e-93 346.3 271 62.0
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.1e-93 344.4 271 61.6
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 1.1e-92 344.0 212 76.4
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.8e-92 343.2 267 65.5
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 1.8e-92 343.2 269 63.9
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 2.4e-92 342.8 271 62.0
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 6.9e-92 341.3 211 80.1
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 4.6e-88 328.6 270 59.3
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 6.0e-88 328.2 222 71.2
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 7.9e-88 327.8 271 60.5
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 3.9e-87 325.5 271 59.8
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 8.7e-87 324.3 270 58.9
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 2.4e-84 316.2 249 61.8
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.5e-81 306.2 197 74.1
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 2.3e-79 299.7 217 69.1
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 3.9e-79 298.9 187 75.4
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 1.1e-78 297.4 295 52.2
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.7e-78 295.0 189 72.5
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 7.2e-73 278.1 269 52.8
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 2.8e-53 213.0 189 57.1
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 7.0e-52 208.4 136 75.0
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 7.7e-51 204.9 181 59.1
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.3e-50 204.1 131 72.5
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 2.7e-48 196.4 270 39.6
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 1.4e-47 194.1 143 66.4
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 6.3e-45 185.3 267 39.0
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 1.2e-40 171.0 188 51.6
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 2.1e-32 143.7 285 35.8
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 1.8e-31 140.6 141 51.8
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 5.2e-31 139.0 269 35.7
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 1.2e-30 137.9 88 75.0
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 5.4e-28 129.0 82 75.6
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 9.2e-28 128.3 77 75.3
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 9.8e-22 108.2 109 54.1
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 4.6e-19 99.4 67 61.2
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 3.9e-18 96.3 68 69.1
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.8e-15 85.5 82 51.2
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 1.4e-12 77.8 49 71.4
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 1.4e-12 77.8 49 71.4
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 5.4e-12 75.9 53 66.0
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 9.2e-12 75.1 108 38.9
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.6e-11 74.3 69 55.1
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 1.3e-10 71.2 67 53.7
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 3.6e-08 63.2 57 57.9
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 6.2e-08 62.4 57 56.1
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 2.0e-06 57.4 52 55.8
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 9.9e-06 55.1 40 57.5


User provided reference genes

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