Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27188 Selenicereus undatus HOM05D007265 ORTHO05D009118 1.2e-29 132.5 68 100.0
EL10Ac1g00247 Beta vulgaris HOM05D007265 ORTHO05D009118 2.0e-19 98.6 56 82.1
Sc01g0002550 Simmondsia chinensis HOM05D007265 ORTHO05D009118 2.6e-19 98.2 55 87.3
Ah.05g179400 Amaranthus hybridus HOM05D007265 ORTHO05D009118 1.7e-18 95.5 62 77.4
Aqoxy5G04249 Aquilegia oxysepala HOM05D007265 ORTHO05D009118 3.7e-18 94.4 57 80.7
arahy.Tifrunner.gnm1.ann1.4N8QKH Arachis hypogaea HOM05D007265 ORTHO05D009118 4.8e-18 94.0 57 82.5
A05p01230 Brassica napus HOM05D007265 ORTHO05D009118 6.3e-18 93.6 67 70.1
Lsat_1_v5_gn_3_126500 Lactuca sativa HOM05D007265 ORTHO05D009118 6.3e-18 93.6 58 79.3
CiPaw.01G077600 Carya illinoinensis HOM05D007265 ORTHO05D009118 8.3e-18 93.2 57 78.9
Ciclev10023834m.g Citrus clementina HOM05D007265 ORTHO05D009118 8.3e-18 93.2 57 82.5
Hma1.2p1_0390F.1_g142620 Hydrangea macrophylla HOM05D007265 ORTHO05D009118 8.3e-18 93.2 57 82.5
MD01G1083600 Malus domestica HOM05D007265 ORTHO05D009118 1.1e-17 92.8 57 80.7
MD07G1152300 Malus domestica HOM05D007265 ORTHO05D009118 1.1e-17 92.8 57 80.7
Oeu007878.1 Olea europaea HOM05D007265 ORTHO05D009118 1.1e-17 92.8 64 75.0
SalBow5G3999 Salvia bowleyana HOM05D002476 ORTHO05D002652 1.1e-17 92.8 56 82.1
THA.LOC104802081 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 1.4e-17 92.4 57 75.4
Atru.chr5.686 Acer truncatum HOM05D007265 ORTHO05D009118 1.8e-17 92.0 57 80.7
AUR62004508 Chenopodium quinoa HOM05D007265 ORTHO05D009118 1.8e-17 92.0 54 79.6
HanXRQChr03g0093001 Helianthus annuus HOM05D007265 ORTHO05D009118 1.8e-17 92.0 57 80.7
MSTRG.17355 Avicennia marina HOM05D007265 ORTHO05D009118 2.4e-17 91.7 61 72.1
CAN.G1415.20 Capsicum annuum HOM05D007265 ORTHO05D009118 2.4e-17 91.7 57 78.9
Cc02_g39560 Coffea canephora HOM05D007265 ORTHO05D009118 2.4e-17 91.7 57 80.7
Prupe.2G190600 Prunus persica HOM05D007265 ORTHO05D009118 2.4e-17 91.7 57 80.7
ATR0602G127 Amborella trichopoda HOM05D007265 ORTHO05D009118 3.1e-17 91.3 57 77.2
Nn1g00287 Nelumbo nucifera HOM05D007265 ORTHO05D009118 4.1e-17 90.9 57 77.2
Nitab4.5_0003865g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 4.1e-17 90.9 57 80.7
Nitab4.5_0000258g0270 Nicotiana tabacum HOM05D007265 ORTHO05D009118 5.3e-17 90.5 57 78.9
THA.LOC104817372 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 5.3e-17 90.5 57 73.7
DCAR_005402 Daucus carota HOM05D007265 ORTHO05D009118 7.0e-17 90.1 57 80.7
PGR042G1917 Punica granatum HOM05D007265 ORTHO05D009118 9.1e-17 89.7 57 75.4
Duzib138G0325 Durio zibethinus HOM05D007265 ORTHO05D009118 1.2e-16 89.4 57 77.2
Lsat_1_v5_gn_4_39661 Lactuca sativa HOM05D007265 ORTHO05D009118 1.2e-16 89.4 57 77.2
AT2G46540 Arabidopsis thaliana HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
BcaC02g12671 Brassica carinata HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
BcaC02g12679 Brassica carinata HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
C04p01380 Brassica napus HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
BolC4t21791H Brassica oleracea HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
BraA05t19124Z Brassica rapa HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
Carub.0004s2926 Capsella rubella HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
Gorai.008G126400 Gossypium raimondii HOM05D007265 ORTHO05D009118 1.6e-16 89.0 64 70.3
Sp4g28590 Schrenkiella parvula HOM05D007265 ORTHO05D009118 1.6e-16 89.0 57 77.2
AL4G45970 Arabidopsis lyrata HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 75.4
CSS0038215 Camellia sinensis var. sinensis HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 75.4
Lj7E499T0 Lonicera japonica HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 75.4
Nitab4.5_0001763g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 78.9
Oeu008708.1 Olea europaea HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 77.2
Gohir.D12G116700 Gossypium hirsutum HOM05D007265 ORTHO05D009118 2.7e-16 88.2 55 78.2
PSO063G4371 Papaver somniferum HOM05D007265 ORTHO05D009118 2.7e-16 88.2 57 75.4
TAR374G1528 Trochodendron aralioides HOM05D007265 ORTHO05D009118 3.5e-16 87.8 54 77.8
ClCG06G002640 Citrullus lanatus HOM05D007265 ORTHO05D009118 4.5e-16 87.4 55 76.4
MELO3C022263.2 Cucumis melo HOM05D007265 ORTHO05D009118 4.5e-16 87.4 57 75.4
Gohir.A12G113200 Gossypium hirsutum HOM05D007265 ORTHO05D009118 4.5e-16 87.4 55 78.2
Migut.N01534 Erythranthe guttata HOM05D007265 ORTHO05D009118 5.9e-16 87.0 57 77.2
Os05g0542100 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 5.9e-16 87.0 57 71.9
PSO170G4391 Papaver somniferum HOM05D007265 ORTHO05D009118 5.9e-16 87.0 57 73.7
Psat3g174080 Pisum sativum HOM05D007265 ORTHO05D009118 5.9e-16 87.0 65 66.2
arahy.Tifrunner.gnm1.ann1.PH1UFL Arachis hypogaea HOM05D007265 ORTHO05D009118 7.7e-16 86.7 57 75.4
COL.COLO4_06226 Corchorus olitorius HOM05D007265 ORTHO05D009118 7.7e-16 86.7 54 77.8
DCAR_025264 Daucus carota HOM05D007265 ORTHO05D009118 7.7e-16 86.7 57 77.2
HanXRQChr13g0423241 Helianthus annuus HOM05D007265 ORTHO05D009118 7.7e-16 86.7 57 77.2
PGSC0003DMG400000233 Solanum tuberosum HOM05D007265 ORTHO05D009118 7.7e-16 86.7 57 77.2
Gohir.A11G097900 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.0e-15 86.3 57 73.7
Gohir.D11G102600 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.0e-15 86.3 57 73.7
MBI07_g24775_MAGBIO Magnolia biondii HOM05D007265 ORTHO05D009118 1.0e-15 86.3 54 74.1
Medtr7g117700 Medicago truncatula HOM05D007265 ORTHO05D009118 1.0e-15 86.3 57 75.4
Sed0002056 Sechium edule HOM05D007265 ORTHO05D009118 1.0e-15 86.3 57 75.4
Sabra02G0140200 Salix brachista HOM05D007265 ORTHO05D009118 1.3e-15 85.9 59 74.6
Thecc.01G340400 Theobroma cacao HOM05D007265 ORTHO05D009118 1.3e-15 85.9 57 73.7
CsaV3_6G008500 Cucumis sativus L. HOM05D007265 ORTHO05D009118 1.7e-15 85.5 57 75.4
Psat3g001880 Pisum sativum HOM05D007265 ORTHO05D009118 1.7e-15 85.5 53 79.2
vmacro13170 Vaccinium macrocarpon HOM05D007265 ORTHO05D009118 1.7e-15 85.5 62 67.7
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 1.7e-15 85.5 57 70.2
Hund16719 Selenicereus undatus HOM05D007265 ORTHO05D009118 2.2e-15 85.1 75 64.0
Glyma.03G258500 Glycine max HOM05D007265 ORTHO05D009118 2.9e-15 84.7 57 73.7
Glyma.19G257100 Glycine max HOM05D007265 ORTHO05D009118 2.9e-15 84.7 57 73.7
Aa31LG1G27910 Aethionema arabicum HOM05D007265 ORTHO05D009118 3.8e-15 84.3 54 74.1
BcaC02g07039 Brassica carinata HOM05D007265 ORTHO05D009118 3.8e-15 84.3 57 73.7
A04p34450 Brassica napus HOM05D007265 ORTHO05D009118 3.8e-15 84.3 57 73.7
Phvul.006G114500 Phaseolus vulgaris HOM05D007265 ORTHO05D009118 3.8e-15 84.3 57 73.7
GSVIVG01027169001 Vitis vinifera HOM05D007265 ORTHO05D009118 3.8e-15 84.3 57 70.2
BraA04t18903Z Brassica rapa HOM05D007265 ORTHO05D009118 5.0e-15 84.0 57 73.7
Duzib133G0073 Durio zibethinus HOM05D007265 ORTHO05D009118 5.0e-15 84.0 55 74.5
Potri.002G173101 Populus trichocarpa HOM05D007265 ORTHO05D009118 5.0e-15 84.0 59 74.6
TWI59G0786 Tripterygium wilfordii HOM05D007265 ORTHO05D009118 5.0e-15 84.0 57 75.4
Ca_09518_v3 Cicer arietinum L. HOM05D007265 ORTHO05D009118 6.5e-15 83.6 57 71.9
Solyc01g096090.4 Solanum lycopersicum HOM05D007265 ORTHO05D009118 6.5e-15 83.6 57 75.4
Sopen01g039810 Solanum pennellii HOM05D007265 ORTHO05D009118 6.5e-15 83.6 57 75.4
CANSAT56G3703 Cannabis sativa HOM05D007265 ORTHO05D009118 1.5e-14 82.4 57 68.4
CARHR141880 Cardamine hirsuta HOM05D007265 ORTHO05D009118 1.5e-14 82.4 57 73.7
HanXRQChr16g0521331 Helianthus annuus HOM05D007265 ORTHO05D009118 1.9e-14 82.0 57 71.9
Lalb_Chr18g0044541 Lupinus albus HOM05D007265 ORTHO05D009118 1.9e-14 82.0 55 76.4
Rhsim01G0174400 Rhododendron simsii HOM05D007265 ORTHO05D009118 1.9e-14 82.0 50 74.0
Manes.01G244801 Manihot esculenta HOM05D007265 ORTHO05D009118 2.5e-14 81.6 57 68.4
Manes.05G021500 Manihot esculenta HOM05D007265 ORTHO05D009118 7.2e-14 80.1 57 68.4
Lj1g0009143 Lotus japonicus HOM05D007265 ORTHO05D009118 9.4e-14 79.7 57 68.4
Lalb_Chr15g0076341 Lupinus albus HOM05D007265 ORTHO05D009118 9.4e-14 79.7 57 70.2
BolC4t28709H Brassica oleracea HOM05D007265 ORTHO05D009118 1.6e-13 79.0 57 68.4
BcaNung06658 Brassica carinata HOM05D007265 ORTHO05D009118 2.7e-13 78.2 48 77.1
Nn3g18955 Nelumbo nucifera HOM05D007265 ORTHO05D009118 6.1e-13 77.0 47 76.6
Os01g0705500 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 1.8e-12 75.5 49 71.4
BcaC02g07016 Brassica carinata HOM05D007265 ORTHO05D009118 4.0e-12 74.3 49 73.5
Gorai.007G109700 Gossypium raimondii HOM05D007265 ORTHO05D009118 1.2e-11 72.8 48 70.8
Thhalv10001742m.g Eutrema salsugineum HOM05D007265 ORTHO05D009118 1.1e-09 66.2 105 41.9
TAR375G0162 Trochodendron aralioides HOM05D007265 ORTHO05D009118 4.2e-06 54.3 45 66.7
AUR62016412 Chenopodium quinoa HOM05D007265 ORTHO05D009118 5.5e-06 53.9 42 61.9


User provided reference genes

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