Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 9.8e-52 206.5 100 100.0
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 3.9e-40 167.9 100 79.0
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 1.9e-39 165.6 100 80.0
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 3.4e-36 154.8 100 75.0
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 3.4e-36 154.8 100 73.0
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 7.6e-36 153.7 100 74.0
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 7.6e-36 153.7 100 74.0
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.2e-35 152.1 100 74.0
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 2.2e-35 152.1 100 73.0
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 2.9e-35 151.8 100 74.0
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 3.8e-35 151.4 100 71.0
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 3.8e-35 151.4 100 74.0
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.9e-35 151.0 100 72.0
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 6.4e-35 150.6 98 72.4
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.4e-34 149.4 100 72.0
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 4.2e-34 147.9 100 72.0
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 7.1e-34 147.1 100 73.0
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 1.2e-33 146.4 100 69.0
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 2.1e-33 145.6 100 71.0
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 2.7e-33 145.2 100 67.0
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.7e-33 145.2 100 68.0
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 7.8e-33 143.7 96 74.0
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 7.8e-33 143.7 100 67.0
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 1.0e-32 143.3 100 69.0
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.7e-32 142.5 100 67.0
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.7e-32 142.5 100 67.0
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 3.9e-32 141.4 100 70.0
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 3.9e-32 141.4 100 69.0
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 8.7e-32 140.2 100 67.0
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 1.1e-31 139.8 99 67.7
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 1.1e-31 139.8 99 66.7
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 1.5e-31 139.4 100 68.0
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 1.9e-31 139.0 100 68.0
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.3e-31 138.3 100 66.0
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 5.6e-31 137.5 100 66.0
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 5.6e-31 137.5 100 64.0
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 7.3e-31 137.1 101 65.3
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 1.6e-30 136.0 100 65.0
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 2.1e-30 135.6 101 64.4
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 2.1e-30 135.6 99 62.6
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 2.1e-30 135.6 100 67.0
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 2.8e-30 135.2 100 65.0
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 2.8e-30 135.2 100 66.0
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 6.2e-30 134.0 99 63.6
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 3.1e-29 131.7 97 66.0
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 4.0e-29 131.3 100 67.0
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 4.0e-29 131.3 96 70.8
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 5.3e-29 131.0 101 64.4
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 5.3e-29 131.0 88 70.5
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 5.3e-29 131.0 97 66.0
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 1.5e-28 129.4 100 64.0
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 2.0e-28 129.0 100 66.0
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 2.6e-28 128.6 100 63.0
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 4.4e-28 127.9 100 59.0
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 4.4e-28 127.9 88 70.5
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 9.9e-28 126.7 88 69.3
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 1.3e-27 126.3 100 62.0
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 1.7e-27 125.9 100 60.0
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 2.2e-27 125.6 96 64.6
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 2.2e-27 125.6 98 62.2
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 3.8e-27 124.8 100 62.0
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 3.8e-27 124.8 88 69.3
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 4.9e-27 124.4 100 59.0
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 8.4e-27 123.6 100 61.0
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 8.4e-27 123.6 88 65.9
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.4e-26 122.9 100 58.0
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 1.4e-26 122.9 100 58.0
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 1.4e-26 122.9 100 60.0
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 2.4e-26 122.1 88 67.0
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 3.2e-26 121.7 100 61.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.2e-26 121.7 100 57.0
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 3.2e-26 121.7 91 64.8
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 7.1e-26 120.6 88 64.8
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 9.3e-26 120.2 97 61.9
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 1.2e-25 119.8 88 68.2
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.1e-25 119.0 88 65.9
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 2.7e-25 118.6 100 59.0
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 2.7e-25 118.6 100 57.0
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 3.5e-25 118.2 101 61.4
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 3.5e-25 118.2 88 64.8
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 6.0e-25 117.5 97 61.9
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 7.8e-25 117.1 105 56.2
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 7.8e-25 117.1 100 56.0
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 1.0e-24 116.7 88 64.8
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 1.7e-24 115.9 101 61.4
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 6.6e-24 114.0 88 63.6
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 6.6e-24 114.0 71 69.0
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.5e-23 112.8 103 54.4
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.5e-23 112.8 100 54.0
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 1.5e-23 112.8 88 62.5
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 2.5e-23 112.1 105 54.3
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 2.5e-23 112.1 88 63.6
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 2.5e-23 112.1 89 60.7
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 3.3e-23 111.7 90 61.1
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 9.6e-23 110.2 76 68.4
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 1.3e-22 109.8 103 52.4
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.3e-22 109.8 88 60.2
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 1.3e-22 109.8 104 52.9
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 1.3e-22 109.8 64 78.1
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 1.6e-22 109.4 108 50.9
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 3.6e-22 108.2 108 50.9
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 4.8e-22 107.8 100 50.0
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 6.2e-22 107.5 102 51.0
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 6.2e-22 107.5 104 50.0
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 1.8e-21 105.9 99 50.5
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 2.4e-21 105.5 104 50.0
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 2.4e-21 105.5 90 55.6
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 4.0e-21 104.8 109 47.7
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 4.0e-21 104.8 103 51.5
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 9.0e-21 103.6 106 53.8
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 9.0e-21 103.6 136 44.9
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 9.0e-21 103.6 77 66.2
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 1.2e-20 103.2 107 49.5
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 1.5e-20 102.8 101 55.4
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 7.6e-20 100.5 77 67.5
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 7.6e-20 100.5 85 58.8
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 4.2e-18 94.7 88 52.3
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 9.3e-18 93.6 84 54.8
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 2.1e-17 92.4 88 53.4
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 2.7e-17 92.0 60 75.0
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 3.0e-16 88.6 58 72.4
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 1.3e-14 83.2 88 44.3
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 1.3e-14 83.2 88 44.3
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 2.1e-14 82.4 55 67.3
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 1.4e-13 79.7 55 65.5
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 2.0e-12 75.9 77 50.6
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 7.6e-12 73.9 87 49.4
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 2.5e-10 68.9 53 52.8
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 5.5e-10 67.8 49 55.1
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 1.2e-09 66.6 79 40.5
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 1.2e-09 66.6 79 40.5
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 1.2e-09 66.6 57 50.9
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 4.6e-09 64.7 41 63.4
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 1.1e-07 60.1 63 49.2
Zm00001eb318190 Zea mays HOM05D000360 ORTHO05D006835 1.1e-07 60.1 43 62.8
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 5.7e-07 57.8 53 56.6


User provided reference genes

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