Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 2129.4 1075 100.0
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1662.5 1094 78.4
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1640.6 1092 77.7
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1607.8 1094 76.4
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1546.6 1095 71.9
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1535.8 1079 72.2
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1528.5 1127 69.6
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1528.1 1078 71.3
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1508.4 1095 72.1
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1506.5 1075 71.2
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1503.0 1071 72.5
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1501.5 1075 69.7
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1499.6 1095 70.0
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1499.2 1094 70.2
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1499.2 1095 69.3
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1496.5 1076 69.5
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1496.1 1075 69.5
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 1493.4 1078 71.2
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1492.2 1084 70.2
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1489.9 1080 68.8
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1487.6 1083 71.8
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1486.5 1081 68.7
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1484.9 1095 68.9
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1483.8 1096 70.5
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1482.6 1089 70.0
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1482.2 1076 70.1
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1481.1 1109 67.8
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1479.9 1082 70.3
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1479.5 1075 70.6
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1478.8 1078 69.3
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1474.1 1090 69.0
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1471.8 1078 70.0
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1471.1 1069 68.9
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1468.4 1084 70.8
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1463.0 1079 68.9
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1463.0 1077 69.5
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1462.2 1080 68.6
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1461.4 1076 68.7
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1458.4 1075 69.6
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1457.6 1078 69.4
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1456.8 1074 70.5
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1454.9 1076 69.4
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1454.5 1095 67.6
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1454.1 1076 69.2
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1452.2 1080 68.2
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1452.2 1098 67.9
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1451.4 1077 69.6
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1450.3 1094 69.0
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1449.1 1068 68.5
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1448.0 1069 68.5
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1448.0 1079 67.8
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1446.4 1108 67.8
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1446.4 1090 68.4
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1438.3 1077 67.3
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1437.2 1116 66.0
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1437.2 1081 69.5
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1437.2 1079 68.5
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1436.4 1059 69.7
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1436.4 1084 67.3
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1435.2 1083 68.1
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1435.2 1090 68.1
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1429.8 1079 68.5
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1427.9 1078 67.7
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1422.9 1078 68.4
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1420.6 1075 69.0
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1418.3 1099 65.5
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1415.6 1077 68.2
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1410.6 1055 70.0
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1409.4 1085 66.7
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1409.0 1074 68.1
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1407.1 1081 67.0
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1401.0 1047 70.2
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1397.5 1072 67.5
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1396.3 1074 67.6
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1393.6 1047 67.8
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1392.5 1078 66.7
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1391.3 1076 66.3
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1390.9 1079 66.5
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1385.5 1078 66.3
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1365.5 1075 66.4
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1354.7 1202 60.2
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1326.6 1081 65.9
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1322.8 1087 63.7
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1319.3 946 71.5
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1308.1 1074 61.9
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1304.3 1138 60.2
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1281.2 1077 61.0
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1271.9 940 69.1
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1261.1 1096 59.9
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1239.2 944 68.5
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1224.9 758 82.1
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1204.1 1196 55.5
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1166.8 1060 58.3
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1156.7 943 65.6
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1115.9 1064 59.2
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1107.4 760 72.5
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1088.2 756 71.4
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 5.1e-287 991.5 721 71.0
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 1.2e-272 943.7 1091 47.9
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 5.8e-259 898.3 1085 47.2
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 8.7e-247 857.8 1017 51.9
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 3.8e-234 815.8 630 66.5
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 1.7e-229 800.4 727 59.4
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 4.5e-219 765.8 1025 43.1
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 1.7e-210 737.3 538 70.6
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 1.2e-182 644.8 1508 31.8
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 1.6e-176 624.4 507 62.5
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 6.8e-175 619.0 655 53.7
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 1.9e-156 557.8 401 72.1
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 1.1e-116 425.6 339 64.6
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 4.4e-73 280.8 169 77.5
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 1.1e-52 213.0 163 65.6
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.1e-39 169.9 127 69.3
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.8e-24 118.2 59 89.8
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 3.3e-20 105.1 54 85.2
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 8.5e-16 90.5 110 41.8
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 8.2e-11 73.9 82 48.8
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 8.2e-11 73.9 82 48.8
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 6.9e-10 70.9 199 27.6
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 1.2e-09 70.1 46 69.6
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 5.5e-07 61.2 57 50.9
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 1.2e-06 60.1 57 49.1


User provided reference genes

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