Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 6.1e-258 893.6 454 100.0
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 6.7e-156 554.7 461 65.1
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 7.4e-155 551.2 461 64.6
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.1e-141 506.5 479 57.0
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 2.7e-141 506.1 460 58.3
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.0e-140 504.2 460 58.0
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 9.7e-139 497.7 458 61.1
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.7e-138 496.9 460 58.5
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.7e-138 496.9 460 58.9
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.8e-138 495.4 458 60.9
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.6e-136 489.6 458 57.4
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 3.4e-136 489.2 461 57.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-135 487.3 465 55.1
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.7e-135 486.9 460 57.0
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.7e-135 486.9 459 55.8
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.1e-134 484.2 482 55.8
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.4e-134 483.8 460 57.4
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.9e-134 483.4 459 57.3
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.9e-134 483.4 458 55.9
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 4.2e-134 482.3 460 56.1
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 7.2e-134 481.5 458 55.9
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.2e-133 480.7 459 56.9
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 1.6e-133 480.3 460 56.3
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.6e-133 480.3 455 56.0
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 4.7e-133 478.8 459 56.9
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 1.8e-132 476.9 459 56.4
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.3e-132 476.5 454 55.5
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 3.0e-132 476.1 483 53.0
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.9e-132 475.7 459 56.4
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 6.7e-132 474.9 453 57.2
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 8.8e-132 474.6 459 56.0
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 8.8e-132 474.6 459 55.3
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.1e-131 474.2 459 55.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 2.0e-131 473.4 459 55.8
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.0e-131 473.4 463 57.2
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 2.0e-131 473.4 460 56.1
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 2.6e-131 473.0 455 56.3
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 2.6e-131 473.0 462 56.7
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 2.6e-131 473.0 456 55.0
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 7.4e-131 471.5 458 55.7
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 9.7e-131 471.1 459 55.1
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.3e-130 470.7 458 54.8
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.7e-130 470.3 459 54.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.7e-130 470.3 459 55.6
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.2e-130 469.9 459 55.3
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.8e-130 468.8 459 55.3
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 8.2e-130 468.0 463 55.5
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 1.4e-129 467.2 460 54.6
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 1.8e-129 466.8 461 56.0
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 4.1e-129 465.7 459 55.3
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.1e-129 465.7 459 54.9
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 7.0e-129 464.9 459 55.1
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 7.0e-129 464.9 457 56.0
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 2.0e-128 463.4 457 53.6
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.6e-128 463.0 486 52.5
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 3.5e-128 462.6 459 55.1
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 5.9e-128 461.8 459 54.7
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 7.7e-128 461.5 460 55.4
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 7.7e-128 461.5 512 51.4
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.0e-127 461.1 460 54.8
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.3e-127 460.7 487 53.2
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 2.9e-127 459.5 458 54.4
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.5e-126 457.2 469 55.4
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 4.2e-126 455.7 455 53.6
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 1.6e-125 453.8 463 54.6
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 2.1e-125 453.4 452 54.4
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.1e-125 453.4 458 54.4
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.6e-125 452.6 460 53.7
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 4.7e-125 452.2 514 49.2
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-123 447.6 459 54.0
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.5e-123 447.2 458 53.7
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 4.4e-123 445.7 465 51.8
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 9.7e-123 444.5 459 53.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.7e-122 443.7 457 53.2
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.7e-122 443.7 459 53.2
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.7e-122 443.7 459 52.9
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 2.2e-122 443.4 459 52.7
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 4.1e-121 439.1 459 52.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 5.3e-121 438.7 464 51.9
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 7.0e-121 438.3 459 52.5
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-120 436.8 454 52.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 7.7e-120 434.9 455 52.7
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.7e-119 433.7 460 52.2
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 1.7e-119 433.7 460 52.2
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.2e-119 433.3 460 51.5
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 3.8e-119 432.6 459 52.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.5e-118 430.6 460 52.4
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 2.5e-118 429.9 436 54.4
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.5e-118 429.9 438 54.6
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.2e-118 429.5 460 52.0
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 5.5e-118 428.7 460 51.7
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 5.5e-118 428.7 460 51.7
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 6.1e-117 425.2 466 52.1
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 5.7e-115 418.7 454 51.1
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 1.8e-113 413.7 468 51.1
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 3.3e-110 402.9 411 53.0
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.8e-109 399.8 458 48.7
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 2.0e-107 393.7 403 52.9
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 5.7e-107 392.1 461 47.9
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 1.1e-102 377.9 463 48.2
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.5e-99 367.5 351 58.4
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 3.5e-96 356.3 493 45.6
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 6.6e-95 352.1 466 45.9
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.5e-91 340.9 353 53.3
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 2.2e-90 337.0 470 45.3
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 5.4e-57 226.1 325 41.8
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 6.7e-55 219.2 500 34.0
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 8.4e-50 202.2 536 30.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-45 188.3 238 45.8
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.1e-44 183.7 238 45.4
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.6e-43 180.6 241 44.4
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 3.9e-39 166.8 142 56.3
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 2.8e-37 160.6 254 39.0
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 8.5e-34 149.1 111 64.0
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.5e-33 147.5 241 39.4
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 3.2e-33 147.1 124 61.3
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.1e-31 139.8 229 39.3
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 6.7e-31 139.4 102 60.8
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.5e-30 138.3 113 60.2
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.1e-25 122.1 95 68.4
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.6e-24 118.2 84 67.9
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 1.8e-23 114.8 103 51.5
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 2.2e-13 81.3 123 42.3


User provided reference genes

Program Settings