Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 3.5e-74 281.6 144 100.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 5.8e-29 131.3 82 78.0
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 5.8e-29 131.3 83 78.3
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.7e-28 129.8 82 79.3
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 1.7e-25 119.8 76 76.3
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 1.1e-24 117.1 76 73.7
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.9e-24 116.3 83 67.5
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 4.7e-23 111.7 76 72.4
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 2.0e-21 106.3 84 64.3
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 4.4e-21 105.1 84 61.9
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 5.8e-21 104.8 83 61.4
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 7.6e-21 104.4 79 65.8
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 7.6e-21 104.4 83 63.9
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.3e-20 103.6 84 63.1
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.7e-20 103.2 83 63.9
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.7e-20 103.2 83 63.9
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.9e-20 102.4 83 57.8
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 6.4e-20 101.3 83 61.4
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 6.4e-20 101.3 84 60.7
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 8.4e-20 100.9 83 61.4
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.4e-19 100.1 83 60.2
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.4e-19 100.1 83 60.2
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.4e-19 100.1 83 60.2
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.4e-19 100.1 83 61.4
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.9e-19 99.8 78 64.1
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 1.9e-19 99.8 84 60.7
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.9e-19 99.8 84 60.7
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 2.4e-19 99.4 85 60.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 4.2e-19 98.6 78 62.8
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 4.2e-19 98.6 84 65.5
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 5.4e-19 98.2 83 62.7
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 7.1e-19 97.8 83 62.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 9.3e-19 97.4 83 60.2
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 9.3e-19 97.4 83 55.4
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 9.3e-19 97.4 83 59.0
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.2e-18 97.1 85 58.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.6e-18 96.7 85 60.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 1.6e-18 96.7 78 61.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.6e-18 96.7 82 57.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.6e-18 96.7 84 64.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 2.1e-18 96.3 83 60.2
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.1e-18 96.3 83 57.8
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 2.1e-18 96.3 84 59.5
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 2.7e-18 95.9 84 58.3
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 2.7e-18 95.9 81 60.5
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.7e-18 95.9 83 61.4
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 3.5e-18 95.5 84 58.3
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 6.0e-18 94.7 85 60.0
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 7.8e-18 94.4 83 56.6
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.8e-18 94.4 84 63.1
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.8e-18 94.4 84 63.1
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 1.7e-17 93.2 83 56.6
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 2.3e-17 92.8 83 62.7
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 3.9e-17 92.0 78 59.0
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 3.9e-17 92.0 81 61.7
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.9e-17 92.0 79 58.2
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 3.9e-17 92.0 84 54.8
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 6.6e-17 91.3 83 57.8
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 1.1e-16 90.5 84 57.1
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.5e-16 90.1 78 60.3
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.9e-16 89.7 83 57.8
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 4.3e-16 88.6 77 58.4
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 5.6e-16 88.2 83 54.2
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 7.3e-16 87.8 82 58.5
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 9.6e-16 87.4 77 59.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.3e-15 87.0 78 55.1
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.6e-15 86.7 77 59.7
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.6e-15 86.7 76 60.5
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 2.1e-15 86.3 82 57.3
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 3.6e-15 85.5 84 58.3
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.6e-15 85.5 83 57.8
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 4.8e-15 85.1 87 55.2
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 6.2e-15 84.7 87 55.2
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 6.2e-15 84.7 87 55.2
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 6.2e-15 84.7 82 56.1
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 8.1e-15 84.3 87 55.2
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.1e-15 84.3 86 55.8
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 8.1e-15 84.3 86 55.8
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.4e-14 83.6 86 54.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.8e-14 83.2 83 55.4
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.1e-14 82.4 71 64.8
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 9.0e-14 80.9 82 56.1
Hund16811 Selenicereus undatus HOM05D007473 ORTHO05D009459 3.4e-13 79.0 63 65.1
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 4.5e-13 78.6 80 56.2
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 6.4e-12 74.7 57 68.4
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 6.4e-12 74.7 79 53.2
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.4e-11 73.6 86 52.3
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-11 73.6 86 52.3
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 1.4e-11 73.6 79 50.6
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.9e-11 73.2 83 49.4
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.9e-11 73.2 80 57.5
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 3.2e-11 72.4 83 51.8
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 5.4e-11 71.6 86 51.2
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 5.4e-11 71.6 84 52.4
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.6e-10 70.1 86 51.2
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-10 69.7 47 74.5
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-08 63.2 97 45.4
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.1e-07 59.7 76 47.4


User provided reference genes

Program Settings