Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 1.5e-149 533.1 319 100.0
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 2.6e-61 240.0 241 58.9
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 4.8e-60 235.7 232 61.2
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 6.5e-57 225.3 218 61.5
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 1.8e-54 217.2 270 51.9
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 2.0e-50 203.8 226 51.8
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 1.1e-43 181.4 229 49.8
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 1.8e-43 180.6 227 50.7
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 5.4e-43 179.1 227 50.2
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 7.0e-43 178.7 279 43.4
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 1.2e-42 177.9 216 50.9
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 1.2e-42 177.9 227 50.2
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 5.9e-42 175.6 258 45.3
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 7.7e-42 175.3 235 49.4
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 7.7e-42 175.3 252 45.2
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 1.0e-41 174.9 217 50.2
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 1.3e-41 174.5 257 47.5
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 1.7e-41 174.1 221 49.8
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 2.3e-41 173.7 216 51.4
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 2.3e-41 173.7 232 50.4
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 2.3e-41 173.7 232 50.4
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 2.9e-41 173.3 226 49.6
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 2.9e-41 173.3 215 50.2
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 1.1e-40 171.4 233 45.9
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 5.6e-40 169.1 258 45.7
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 5.6e-40 169.1 215 51.2
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 5.6e-40 169.1 215 51.2
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 7.3e-40 168.7 235 46.4
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 7.3e-40 168.7 261 43.7
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 1.2e-39 167.9 267 44.2
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 1.6e-39 167.5 221 48.4
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 1.6e-39 167.5 225 48.0
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 2.1e-39 167.2 220 48.6
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 2.8e-39 166.8 228 49.1
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 4.7e-39 166.0 215 51.2
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 6.1e-39 165.6 230 47.4
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 1.0e-38 164.9 215 50.2
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 5.2e-38 162.5 215 47.9
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 6.8e-38 162.2 234 44.9
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 6.8e-38 162.2 215 49.3
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 6.8e-38 162.2 243 45.7
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 8.9e-38 161.8 237 45.6
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 1.5e-37 161.0 246 43.9
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 2.0e-37 160.6 243 45.3
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 5.7e-37 159.1 286 42.3
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 7.5e-37 158.7 243 46.1
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 7.5e-37 158.7 225 45.3
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 7.5e-37 158.7 267 44.6
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 2.9e-36 156.8 224 50.4
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 2.9e-36 156.8 243 46.9
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 3.7e-36 156.4 219 48.9
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 3.7e-36 156.4 230 47.8
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 3.2e-35 153.3 260 44.6
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 4.1e-35 152.9 237 44.3
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 4.1e-35 152.9 220 46.8
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 4.1e-35 152.9 227 45.4
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 3.5e-34 149.8 231 45.9
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 7.8e-34 148.7 215 44.7
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 1.0e-33 148.3 217 46.5
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 1.0e-33 148.3 230 44.3
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 1.3e-33 147.9 219 45.2
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 2.3e-33 147.1 229 45.9
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 3.0e-33 146.7 254 43.7
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 3.0e-33 146.7 225 45.8
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 3.9e-33 146.4 213 45.1
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 3.9e-33 146.4 254 43.3
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 5.6e-32 142.5 243 42.8
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 9.5e-32 141.7 260 40.4
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 1.2e-31 141.4 231 43.3
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 1.6e-31 141.0 219 45.2
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 3.6e-31 139.8 218 44.5
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 3.6e-31 139.8 247 43.3
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 6.2e-31 139.0 222 43.2
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 3.1e-30 136.7 256 37.5
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 5.2e-30 136.0 206 46.6
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 1.5e-29 134.4 172 50.6
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 3.4e-29 133.3 227 44.1
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 9.8e-29 131.7 226 43.4
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 1.3e-28 131.3 212 43.9
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 1.7e-28 131.0 233 41.6
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 1.4e-27 127.9 177 46.3
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 1.9e-27 127.5 232 40.9
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 4.1e-27 126.3 226 40.3
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 1.6e-26 124.4 233 38.6
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 2.0e-26 124.0 233 39.5
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 2.7e-26 123.6 240 41.7
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 1.7e-25 120.9 217 39.6
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 2.3e-25 120.6 218 41.7
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 1.1e-24 118.2 163 49.7
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 1.2e-23 114.8 259 35.1
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 9.8e-21 105.1 150 46.0
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 1.4e-19 101.3 263 32.3
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 2.4e-19 100.5 150 46.7
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 4.1e-19 99.8 86 61.6
CSS0016033 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 3.5e-18 96.7 63 74.6
CSS0017802 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 3.5e-18 96.7 63 74.6
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 1.1e-16 91.7 60 75.0
Psat5g292640 Pisum sativum HOM05D006413 ORTHO05D007722 2.5e-16 90.5 58 75.9
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 1.5e-13 81.3 49 79.6
CSS0033391 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 8.4e-12 75.5 134 38.1
CSS0026125 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 7.1e-11 72.4 134 37.3
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 9.2e-11 72.0 54 61.1
Solyc03g058437.1 Solanum lycopersicum HOM05D006413 ORTHO05D007722 2.1e-10 70.9 51 70.6
Hma1.2p1_0074F.1_g038990 Hydrangea macrophylla HOM05D006413 ORTHO05D007722 3.9e-09 66.6 152 35.5
Nitab4.5_0000001g0010 Nicotiana tabacum HOM05D006413 ORTHO05D007722 3.1e-06 57.0 100 40.0


User provided reference genes

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