Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.2e-119 433.7 211 100.0
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.5e-83 313.9 241 70.5
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.8e-66 256.5 235 60.9
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.4e-63 246.1 153 81.0
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.3e-42 176.4 198 54.0
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 1.9e-35 154.8 252 39.3
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 3.2e-30 137.5 252 37.3
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 7.7e-24 116.3 168 43.5
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 1.0e-23 115.9 251 34.3
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 1.0e-23 115.9 254 34.3
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 1.0e-23 115.9 247 34.0
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.7e-23 115.2 167 43.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 7.2e-22 109.8 246 34.1
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 9.4e-22 109.4 210 37.6
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 2.1e-21 108.2 165 42.4
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 2.7e-21 107.8 254 31.5
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 4.7e-21 107.1 178 42.7
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 3.0e-20 104.4 252 32.9
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 6.7e-20 103.2 248 33.1
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 6.7e-20 103.2 248 32.7
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 6.7e-20 103.2 248 33.1
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 6.7e-20 103.2 182 37.9
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.1e-19 102.4 256 34.4
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 5.7e-19 100.1 178 41.6
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 5.7e-19 100.1 170 40.6
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 1.3e-18 99.0 191 39.3
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.7e-18 98.6 172 41.3
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.8e-18 97.1 184 38.0
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 4.8e-18 97.1 249 30.9
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 6.3e-18 96.7 216 35.6
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 6.3e-18 96.7 160 38.1
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 8.2e-18 96.3 167 37.7
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 8.2e-18 96.3 246 30.1
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 3.1e-17 94.4 175 38.9
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 7.0e-17 93.2 159 40.3
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 9.1e-17 92.8 163 41.1
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.6e-16 92.0 157 40.1
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.0e-16 91.7 261 31.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 2.6e-16 91.3 172 41.3
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 3.5e-16 90.9 255 31.4
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 4.5e-16 90.5 172 36.0
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 5.9e-16 90.1 165 38.8
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.3e-15 89.0 178 35.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 1.3e-15 89.0 246 31.3
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.3e-15 89.0 159 37.7
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 2.2e-15 88.2 168 37.5
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 6.5e-15 86.7 92 52.2
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 6.5e-15 86.7 165 40.0
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.1e-14 85.9 90 53.3
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 2.5e-14 84.7 107 46.7
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 3.2e-14 84.3 92 50.0
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 4.2e-14 84.0 165 38.2
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 7.2e-14 83.2 161 37.9
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 9.4e-14 82.8 108 44.4
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 1.2e-13 82.4 159 36.5
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 1.6e-13 82.0 163 35.6
Glyma.14G184300 Glycine max HOM05D006739 ORTHO05D008402 1.6e-13 82.0 147 40.1
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 2.1e-13 81.6 165 40.6
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 4.7e-13 80.5 156 37.8
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 6.1e-13 80.1 158 38.6
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 8.0e-13 79.7 260 28.8
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 1.4e-12 79.0 156 37.2
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.8e-12 78.6 152 36.2
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 2.3e-12 78.2 89 47.2
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.0e-12 77.4 158 36.7
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 8.8e-12 76.3 139 38.8
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 2.0e-11 75.1 106 41.5
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 3.3e-11 74.3 112 41.1
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 3.3e-11 74.3 106 41.5
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 4.4e-11 73.9 250 28.8
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 4.4e-11 73.9 148 33.8
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 5.7e-11 73.6 163 36.2
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.7e-11 73.6 159 32.7
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 5.7e-11 73.6 177 33.9
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 7.5e-11 73.2 96 44.8
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 7.5e-11 73.2 185 30.8
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 7.5e-11 73.2 177 34.5
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 7.5e-11 73.2 177 34.5
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 7.5e-11 73.2 100 43.0
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 9.7e-11 72.8 250 28.4
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 9.7e-11 72.8 165 36.4
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.3e-10 72.4 232 28.9
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 1.3e-10 72.4 162 35.2
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.3e-10 72.4 177 32.8
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.7e-10 72.0 96 43.8
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.7e-10 72.0 101 43.6
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.2e-10 71.6 158 34.2
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 2.8e-10 71.2 161 34.8
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 3.7e-10 70.9 154 35.7
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 4.8e-10 70.5 180 31.1
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 6.3e-10 70.1 124 40.3
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 6.3e-10 70.1 71 53.5
Lalb_Chr08g0242631 Lupinus albus HOM05D006739 ORTHO05D008402 8.2e-10 69.7 39 84.6
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 1.4e-09 68.9 154 36.4
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.4e-09 68.2 209 27.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.4e-09 68.2 209 27.3
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 7.0e-09 66.6 76 46.1
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 2.0e-08 65.1 106 36.8
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.0e-08 65.1 186 31.2
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.5e-08 63.9 103 34.0
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 6.5e-07 60.1 115 34.8
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 3.2e-06 57.8 83 43.4
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 3.2e-06 57.8 134 32.1
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 4.2e-06 57.4 130 32.3
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 4.2e-06 57.4 88 38.6
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 7.2e-06 56.6 90 34.4
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 9.4e-06 56.2 103 33.0
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 9.4e-06 56.2 42 64.3


User provided reference genes

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