Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 2.8e-224 781.6 377 100.0
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 1.1e-130 470.7 366 65.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 4.4e-129 465.3 355 65.1
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.4e-129 465.3 354 66.4
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.1e-127 460.7 354 64.1
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.6e-126 456.8 355 64.8
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.7e-126 456.1 374 61.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.3e-125 453.8 354 63.8
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 8.6e-125 451.1 354 61.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 8.6e-125 451.1 354 62.4
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.5e-124 450.3 352 61.6
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 5.6e-124 448.4 358 63.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 7.3e-124 448.0 354 63.6
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 6.2e-123 444.9 355 62.3
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.1e-122 442.6 356 63.2
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 5.2e-122 441.8 354 62.1
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 6.8e-122 441.4 354 59.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 2.6e-121 439.5 354 62.1
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 2.6e-121 439.5 353 61.5
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 2.6e-121 439.5 358 61.7
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 9.9e-121 437.6 453 52.3
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 6.4e-120 434.9 354 61.0
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.1e-119 434.1 354 60.5
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.1e-119 434.1 353 60.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 1.1e-119 434.1 354 60.7
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.3e-119 431.0 353 60.3
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.1e-118 429.9 355 61.4
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.1e-118 429.9 387 56.6
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.7e-118 429.5 355 59.4
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 3.5e-118 429.1 354 60.5
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.6e-118 428.7 353 60.1
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 2.3e-117 426.4 355 59.4
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.3e-117 426.4 354 60.5
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 5.1e-117 425.2 356 61.0
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 6.6e-117 424.9 357 59.1
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 1.1e-116 424.1 355 59.4
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 2.5e-116 422.9 355 59.7
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 3.3e-116 422.5 352 59.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 4.3e-116 422.2 353 60.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 9.6e-116 421.0 333 62.8
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 2.1e-115 419.9 353 60.1
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.1e-115 419.9 353 58.4
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 4.8e-115 418.7 355 60.3
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 2.4e-114 416.4 354 59.6
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 5.3e-114 415.2 355 58.6
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 6.9e-114 414.8 366 57.1
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.2e-113 414.1 354 57.9
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.6e-113 411.4 418 51.9
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 7.6e-113 411.4 354 58.5
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.3e-112 410.6 355 59.4
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 2.2e-112 409.8 422 51.4
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 9.3e-111 404.4 355 57.5
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.3e-109 400.6 355 58.3
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 5.1e-109 398.7 356 56.7
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 9.6e-108 394.4 355 56.1
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 1.3e-107 394.0 323 59.1
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 4.8e-107 392.1 342 57.9
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.8e-107 392.1 342 57.9
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.4e-106 389.8 342 57.6
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 3.8e-104 382.5 359 55.2
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.5e-97 360.5 502 43.4
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.2e-95 352.8 353 53.0
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 9.3e-95 351.3 460 45.2
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 4.6e-86 322.4 271 60.5
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.1e-74 284.6 359 42.1
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 1.7e-72 277.3 293 50.5
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.8e-72 276.2 359 42.1
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.1e-71 274.6 192 67.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 3.2e-71 273.1 243 56.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.1e-62 243.8 347 43.8
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 8.0e-62 241.9 197 59.9
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.5e-60 237.7 218 57.3
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 7.2e-55 218.8 152 67.8
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.2e-54 218.0 345 36.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 4.8e-51 206.1 148 64.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 7.0e-50 202.2 257 47.1
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.2e-49 201.4 240 45.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-48 198.0 142 65.5
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 3.0e-37 160.2 106 71.7
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.7e-35 153.3 164 50.6
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.1e-30 137.5 424 27.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.8e-30 137.1 131 55.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.4e-29 134.8 390 29.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 9.8e-28 128.6 69 76.8
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 9.8e-28 128.6 69 76.8
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-27 127.9 69 75.4
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.6e-25 121.3 70 72.9
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.0e-25 119.4 107 50.5
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.3e-21 107.5 104 57.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.2e-20 105.1 109 52.3
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.5e-20 102.4 67 73.1
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.8e-20 102.1 67 71.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-19 100.5 67 71.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 8.3e-19 99.0 67 71.6
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.4e-18 96.3 115 51.3
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.6e-16 89.4 49 69.4
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.2e-14 85.1 79 60.8
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.7e-14 83.2 83 44.6
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.4e-13 81.6 288 26.7
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.8e-13 81.3 88 52.3
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 3.1e-13 80.5 57 57.9
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 6.8e-13 79.3 165 37.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.2e-12 78.6 90 40.0
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.2e-12 78.6 49 65.3
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 3.6e-06 57.0 58 50.0


User provided reference genes

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