Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 9.8e-133 476.9 251 100.0
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 2.6e-77 292.7 243 67.5
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 6.9e-70 268.1 244 60.2
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.3e-65 253.1 225 61.8
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 6.3e-63 245.0 218 59.2
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.1e-62 244.2 248 52.8
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.8e-62 243.4 224 57.1
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 9.0e-62 241.1 245 51.4
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.3e-60 237.3 242 53.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 1.1e-59 234.2 246 52.0
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 2.5e-59 233.0 243 51.4
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 4.2e-59 232.3 216 56.0
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.5e-59 231.9 217 56.2
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 7.2e-59 231.5 237 51.5
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 7.2e-59 231.5 242 52.1
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 1.6e-58 230.3 223 52.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 3.6e-58 229.2 216 56.5
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 6.1e-58 228.4 253 54.2
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 7.9e-58 228.0 235 53.2
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.4e-57 227.3 219 53.9
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 2.0e-56 223.4 216 56.0
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.3e-56 222.6 224 51.8
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 5.7e-56 221.9 242 49.2
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 7.4e-56 221.5 250 48.8
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 7.4e-56 221.5 252 48.4
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 7.4e-56 221.5 212 57.5
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 9.7e-56 221.1 239 50.6
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.7e-55 220.3 219 51.1
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 2.2e-55 219.9 242 50.0
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 2.8e-55 219.5 232 49.6
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 8.2e-55 218.0 216 50.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 2.4e-54 216.5 247 47.8
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 5.3e-54 215.3 229 51.5
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 9.1e-54 214.5 243 54.7
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 9.1e-54 214.5 239 46.0
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 2.6e-53 213.0 260 47.3
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 3.4e-53 212.6 250 48.0
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 3.4e-53 212.6 242 47.1
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.4e-53 212.6 242 47.1
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 4.5e-53 212.2 241 48.1
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.9e-53 211.8 242 47.1
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 7.7e-53 211.5 242 47.1
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.0e-52 211.1 226 50.4
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.7e-52 210.3 221 48.9
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 2.9e-52 209.5 241 50.2
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 5.0e-52 208.8 222 50.9
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 5.0e-52 208.8 213 54.9
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 8.5e-52 208.0 241 49.0
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 1.1e-51 207.6 213 52.1
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.9e-51 206.8 214 50.0
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 1.9e-51 206.8 241 49.4
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 2.5e-51 206.5 258 45.7
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 4.2e-51 205.7 230 53.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 4.2e-51 205.7 220 50.0
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.2e-51 205.7 224 50.4
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 5.5e-51 205.3 220 49.5
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 9.4e-51 204.5 222 50.0
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 9.4e-51 204.5 262 46.6
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 1.6e-50 203.8 237 45.1
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.7e-50 203.0 223 49.8
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 2.7e-50 203.0 218 46.8
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 3.6e-50 202.6 250 47.6
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.6e-50 202.6 224 50.0
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 4.7e-50 202.2 270 41.9
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 6.1e-50 201.8 218 48.2
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.0e-49 201.1 224 48.2
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.0e-49 201.1 222 50.0
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 1.4e-49 200.7 250 48.0
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 1.4e-49 200.7 213 54.0
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.8e-49 200.3 249 51.8
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.0e-49 199.5 213 48.4
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 1.1e-48 197.6 256 46.5
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.1e-48 197.6 262 45.8
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 1.1e-48 197.6 238 44.5
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 2.6e-48 196.4 217 48.8
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 3.3e-48 196.1 246 44.7
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 3.3e-48 196.1 221 50.2
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 5.7e-48 195.3 256 44.5
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 1.7e-47 193.7 239 43.1
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.8e-47 193.0 252 47.2
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 3.7e-47 192.6 229 46.7
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 8.2e-47 191.4 245 46.1
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 8.2e-47 191.4 232 43.5
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 8.2e-47 191.4 220 50.0
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 1.8e-46 190.3 224 46.4
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 3.1e-46 189.5 239 43.9
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 3.1e-46 189.5 189 52.4
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 4.1e-46 189.1 260 45.8
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 4.1e-46 189.1 260 45.8
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 9.1e-46 188.0 260 45.8
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.5e-45 186.0 217 45.2
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 4.5e-45 185.7 260 45.4
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 5.9e-45 185.3 212 46.7
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.3e-44 184.1 266 45.1
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.7e-44 183.7 214 50.5
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.2e-44 183.3 249 45.0
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 5.0e-44 182.2 226 42.9
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 1.9e-43 180.3 241 45.2
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.5e-43 179.9 251 40.6
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.5e-43 179.9 251 40.6
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 7.2e-43 178.3 220 43.6
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 1.2e-42 177.6 294 39.1
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 1.6e-42 177.2 211 47.9
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 2.1e-42 176.8 202 48.0
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 2.6e-40 169.9 223 42.2
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 5.7e-40 168.7 241 41.9
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 9.7e-40 167.9 234 44.0
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 9.7e-40 167.9 206 45.1
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 3.7e-39 166.0 220 42.7
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 5.3e-38 162.2 211 48.8
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 7.0e-38 161.8 208 43.3
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 3.8e-36 156.0 188 43.6
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.0e-36 155.6 117 59.8
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 3.2e-35 152.9 230 42.2
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 4.2e-35 152.5 192 45.8
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 4.2e-35 152.5 196 45.4
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 5.5e-35 152.1 196 45.4
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 6.1e-34 148.7 196 43.9
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 1.0e-33 147.9 196 43.9
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.0e-33 147.9 196 43.9
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.4e-30 137.5 223 41.7
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 7.0e-30 135.2 160 60.0
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 7.2e-27 125.2 135 50.4
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 6.1e-26 122.1 214 36.4
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.0e-21 107.1 231 35.9
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 6.6e-20 102.1 84 66.7
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 4.9e-15 85.9 212 39.2
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 7.8e-13 78.6 106 43.4
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 6.8e-09 65.5 172 30.8
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 5.8e-08 62.4 115 32.2
AagrBONN_evm.TU.Sc2ySwM_228.3977 Anthoceros agrestis HOM05D024008 ORTHO05D000523 6.4e-07 58.9 83 33.7


User provided reference genes

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