Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 0.0e+00 1367.4 681 100.0
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 1.4e-210 736.9 603 62.0
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 3.1e-205 719.2 604 61.9
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 9.3e-194 681.0 601 58.7
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 3.0e-184 649.4 603 55.1
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 5.1e-184 648.7 614 54.9
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 8.7e-184 647.9 604 56.1
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 2.5e-183 646.4 569 57.1
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 6.9e-181 638.3 620 53.9
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 3.4e-180 636.0 607 55.0
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 7.6e-180 634.8 602 54.3
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 3.8e-179 632.5 570 55.8
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 4.9e-179 632.1 585 55.7
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 8.4e-179 631.3 609 53.5
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 1.1e-178 630.9 574 56.8
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 5.5e-178 628.6 607 54.0
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 5.5e-178 628.6 611 53.8
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 9.3e-178 627.9 607 52.9
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 1.6e-177 627.1 603 53.6
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 1.6e-177 627.1 613 53.7
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 2.1e-177 626.7 576 54.7
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 3.5e-177 625.9 605 53.4
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 4.6e-177 625.5 568 56.9
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 6.0e-177 625.2 576 54.7
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 1.0e-176 624.4 569 55.4
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.3e-176 624.0 569 55.2
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 1.8e-176 623.6 605 54.4
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 3.0e-176 622.9 601 54.1
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 3.0e-176 622.9 585 53.3
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 8.7e-176 621.3 574 55.4
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 8.7e-176 621.3 601 54.1
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 2.8e-174 616.3 628 51.4
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 2.8e-174 616.3 568 56.2
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 6.3e-174 615.1 602 53.5
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 8.2e-174 614.8 582 54.1
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 8.2e-174 614.8 603 52.9
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 3.1e-173 612.8 610 52.6
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 9.0e-173 611.3 604 52.8
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-171 607.1 585 54.5
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 2.2e-171 606.7 577 55.3
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 2.9e-171 606.3 569 56.1
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 8.4e-171 604.7 607 51.7
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 8.4e-171 604.7 618 51.9
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.4e-170 604.0 590 53.7
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 1.4e-170 604.0 590 53.4
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 3.2e-170 602.8 615 50.7
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 5.5e-170 602.1 569 54.5
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 7.2e-170 601.7 591 53.3
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.2e-169 600.9 590 53.6
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 1.6e-169 600.5 607 52.4
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 1.6e-169 600.5 602 51.3
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 4.6e-169 599.0 602 51.5
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 6.1e-169 598.6 574 53.5
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 7.9e-169 598.2 588 53.6
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 1.3e-168 597.4 602 52.5
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.3e-168 597.4 583 52.0
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 2.3e-168 596.7 613 51.5
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 3.0e-168 596.3 614 51.6
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 3.0e-168 596.3 547 56.1
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 3.0e-168 596.3 609 51.4
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 3.9e-168 595.9 609 51.2
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 2.5e-167 593.2 608 50.8
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 3.3e-167 592.8 572 54.7
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 3.3e-167 592.8 611 51.6
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 4.3e-167 592.4 564 53.4
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 2.8e-166 589.7 582 52.2
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 3.7e-166 589.3 613 52.2
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 4.8e-166 589.0 574 52.8
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 1.1e-165 587.8 554 55.1
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 4.1e-165 585.9 598 52.5
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 3.4e-164 582.8 594 52.7
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.7e-163 580.5 575 53.0
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 5.0e-163 578.9 580 53.3
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 5.0e-163 578.9 578 52.6
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 1.4e-162 577.4 594 52.4
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 1.9e-162 577.0 582 53.4
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 7.2e-162 575.1 554 54.5
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 3.3e-159 566.2 596 51.5
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 4.8e-158 562.4 565 52.0
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 1.4e-157 560.8 566 51.2
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 2.4e-157 560.1 554 52.5
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 8.5e-155 551.6 567 51.9
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 1.2e-153 547.7 581 49.7
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 1.6e-153 547.4 568 50.7
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 5.1e-152 542.3 545 52.3
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 1.1e-151 541.2 528 54.0
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 4.8e-150 535.8 582 50.0
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 8.0e-145 518.5 532 50.8
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 1.3e-142 511.1 579 48.2
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 1.5e-138 497.7 490 53.3
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 2.5e-138 496.9 598 45.0
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 2.0e-135 487.3 602 46.3
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 4.1e-133 479.6 483 52.4
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 4.1e-133 479.6 558 45.7
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 4.5e-132 476.1 667 41.1
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 4.5e-132 476.1 667 41.1
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 1.5e-130 471.1 498 50.2
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 4.9e-126 456.1 410 55.6
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 8.3e-126 455.3 412 55.1
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 1.8e-125 454.1 568 44.7
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 8.6e-123 445.3 412 54.6
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 8.0e-121 438.7 421 54.9
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.2e-119 434.9 487 48.9
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 2.6e-119 433.7 507 47.9
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 1.8e-117 427.6 311 64.6
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 9.2e-117 425.2 519 46.2
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 6.8e-112 409.1 280 69.3
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 3.9e-107 393.3 448 48.7
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 1.5e-106 391.3 575 41.4
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 1.9e-106 391.0 565 43.0
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 6.8e-104 382.5 412 50.0
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 7.9e-76 289.3 234 59.4
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 7.4e-66 256.1 526 32.7
Glyma.17G068567 Glycine max HOM05D005919 ORTHO05D007176 9.0e-64 249.2 189 63.0
arahy.Tifrunner.gnm1.ann1.8I3VMK Arachis hypogaea HOM05D005919 ORTHO05D007176 5.3e-56 223.4 197 57.9
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 6.5e-54 216.5 154 68.8
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 1.1e-53 215.7 228 52.2
Sabra18G0085400 Salix brachista HOM05D005919 ORTHO05D007176 1.0e-46 192.6 140 61.4
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 1.1e-42 179.1 108 74.1
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 2.0e-42 178.3 117 68.4
CDE02G3325 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 1.8e-40 171.8 123 61.0
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 5.3e-40 170.2 144 61.1
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 6.1e-36 156.8 528 29.9
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 3.2e-29 134.4 108 62.0
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 3.2e-29 134.4 108 62.0
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 3.2e-29 134.4 108 62.0
GSVIVG01023746001 Vitis vinifera HOM05D005919 ORTHO05D007176 3.6e-28 131.0 89 64.0
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.9e-21 108.6 76 63.2
Actinidia15384 Actinidia chinensis HOM05D005919 ORTHO05D007176 2.1e-20 105.1 84 57.1
AL1G16380 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 8.8e-19 99.8 81 61.7
DCAR_017944 Daucus carota HOM05D005919 ORTHO05D007176 2.9e-14 84.7 121 44.6
Psat4g048040 Pisum sativum HOM05D005919 ORTHO05D007176 2.2e-09 68.6 40 75.0
SMO145G0125 Selaginella moellendorffii HOM05D009274 ORTHO05D011512 3.1e-08 64.7 45 57.8
SMO117G0345 Selaginella moellendorffii HOM05D006213 ORTHO05D008107 7.8e-07 60.1 165 28.5
Sc23g0004890 Simmondsia chinensis HOM05D006213 ORTHO05D008107 1.7e-06 58.9 236 22.9
TAR374G1216 Trochodendron aralioides HOM05D006213 ORTHO05D008107 2.3e-06 58.5 101 30.7
Lsat_1_v5_gn_4_39261 Lactuca sativa HOM05D006213 ORTHO05D008107 2.9e-06 58.2 95 30.5
Nitab4.5_0004837g0040 Nicotiana tabacum HOM05D006213 ORTHO05D008107 5.0e-06 57.4 158 27.2
Pp3c18_21620 Physcomitrium patens HOM05D006213 ORTHO05D008107 6.6e-06 57.0 156 28.2
PGR042G3832 Punica granatum HOM05D006213 ORTHO05D008107 6.6e-06 57.0 168 25.0
AagrBONN_evm.TU.Sc2ySwM_344.5349 Anthoceros agrestis HOM05D006213 ORTHO05D008107 8.6e-06 56.6 191 26.7


User provided reference genes

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